Wall clock time and date at job start Sun Mar 29 2020 21:37:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46494 * 120.00636 * 2 1 4 4 C 1.50699 * 109.47225 * 270.00515 * 3 2 1 5 5 C 1.38272 * 119.98449 * 269.72461 * 4 3 2 6 6 C 1.38224 * 120.04810 * 179.72594 * 5 4 3 7 7 C 1.38213 * 120.02694 * 0.54758 * 6 5 4 8 8 C 1.38436 * 119.97619 * 359.72296 * 7 6 5 9 9 F 1.35099 * 120.02821 * 180.02562 * 8 7 6 10 10 C 1.38169 * 119.98989 * 89.99686 * 4 3 2 11 11 C 1.34781 * 119.99714 * 180.02562 * 2 1 3 12 12 O 1.21690 * 120.00174 * 179.72359 * 11 2 1 13 13 C 1.46375 * 120.00113 * 359.97438 * 11 2 1 14 14 H 1.08007 * 119.99786 * 352.43379 * 13 11 2 15 15 C 1.40042 * 120.00381 * 172.43007 * 13 11 2 16 16 N 1.30673 * 120.00102 * 6.05674 * 15 13 11 17 17 Si 1.86806 * 120.00238 * 186.05264 * 15 13 11 18 18 H 1.48491 * 109.46959 * 94.98083 * 17 15 13 19 19 H 1.48503 * 109.46978 * 214.98156 * 17 15 13 20 20 H 1.48502 * 109.47036 * 334.97941 * 17 15 13 21 21 H 1.09000 * 109.46735 * 269.99937 * 1 2 3 22 22 H 1.08998 * 109.46832 * 29.99694 * 1 2 3 23 23 H 1.08995 * 109.47408 * 150.00093 * 1 2 3 24 24 H 1.09005 * 109.47050 * 30.00021 * 3 2 1 25 25 H 1.08997 * 109.47585 * 149.99715 * 3 2 1 26 26 H 1.07999 * 119.97321 * 359.97438 * 5 4 3 27 27 H 1.07995 * 119.98176 * 180.27345 * 6 5 4 28 28 H 1.07998 * 120.01540 * 179.75151 * 7 6 5 29 29 H 1.07997 * 120.01502 * 359.97438 * 10 4 3 30 30 H 0.96993 * 120.00694 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2686 0.0000 4 6 2.4487 1.7037 -1.4208 5 6 3.6037 1.3090 -2.0705 6 6 3.8327 1.7026 -3.3756 7 6 2.9126 2.5007 -4.0288 8 6 1.7585 2.9011 -3.3775 9 9 0.8582 3.6808 -4.0152 10 6 1.5275 2.5015 -2.0718 11 6 2.1389 -1.1673 -0.0005 12 8 3.3557 -1.1674 -0.0056 13 6 1.4069 -2.4349 -0.0005 14 1 0.3340 -2.4389 0.1231 15 6 2.0978 -3.6424 -0.1608 16 7 3.4042 -3.6487 -0.1916 17 14 1.1519 -5.2444 -0.3305 18 1 0.9742 -5.5641 -1.7696 19 1 1.9086 -6.3383 0.3299 20 1 -0.1788 -5.1041 0.3135 21 1 -0.3633 0.0000 1.0277 22 1 -0.3633 0.8900 -0.5138 23 1 -0.3634 -0.8899 -0.5138 24 1 1.6086 2.0283 0.5139 25 1 3.1500 1.1383 0.5138 26 1 4.3255 0.6893 -1.5592 27 1 4.7331 1.3900 -3.8834 28 1 3.0936 2.8114 -5.0472 29 1 0.6273 2.8130 -1.5629 30 1 3.8828 -4.4850 -0.3023 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020266757.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:37:31 Heat of formation + Delta-G solvation = -57.379787 kcal Electronic energy + Delta-G solvation = -16392.651404 eV Core-core repulsion = 13488.385961 eV Total energy + Delta-G solvation = -2904.265442 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 237.091 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -48.66234 -38.99919 -37.33056 -34.07176 -32.48029 -31.32689 -30.16668 -27.23305 -25.94273 -24.39432 -22.38708 -21.40306 -19.22520 -16.98762 -16.57234 -15.92272 -15.81027 -15.51815 -15.36045 -14.55784 -14.23671 -14.08222 -13.56934 -13.05449 -12.47396 -12.40044 -11.87520 -11.58783 -11.46711 -11.41327 -11.20998 -11.03411 -10.92569 -10.71950 -10.27517 -10.16169 -8.88392 -8.73053 -8.35906 -7.60795 -7.30353 -6.24096 -4.67699 1.49479 1.52597 3.11300 3.19025 3.21949 3.86072 4.09861 4.47001 4.54011 4.71617 5.00976 5.08313 5.36527 5.61185 5.67193 5.72189 5.82364 5.99124 6.10111 6.30147 6.34254 6.40937 6.51290 6.55129 6.71281 6.96053 7.24840 7.41364 7.55800 8.08121 8.30376 8.99033 9.35991 10.52516 10.71128 Molecular weight = 237.09amu Principal moments of inertia in cm(-1) A = 0.031730 B = 0.006658 C = 0.006453 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 882.247274 B = 4204.456350 C = 4338.311141 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.101 3.899 2 N -0.643 5.643 3 C 0.160 3.840 4 C -0.059 4.059 5 C -0.098 4.098 6 C -0.097 4.097 7 C -0.163 4.163 8 C 0.084 3.916 9 F -0.148 7.148 10 C -0.147 4.147 11 C 0.558 3.442 12 O -0.574 6.574 13 C -0.543 4.543 14 H 0.072 0.928 15 C 0.088 3.912 16 N -0.766 5.766 17 Si 0.905 3.095 18 H -0.273 1.273 19 H -0.279 1.279 20 H -0.264 1.264 21 H 0.033 0.967 22 H 0.040 0.960 23 H 0.072 0.928 24 H 0.064 0.936 25 H 0.086 0.914 26 H 0.140 0.860 27 H 0.128 0.872 28 H 0.127 0.873 29 H 0.128 0.872 30 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.214 9.162 -3.860 10.449 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.043 4.043 2 N -0.380 5.380 3 C 0.036 3.964 4 C -0.061 4.061 5 C -0.117 4.117 6 C -0.115 4.115 7 C -0.182 4.182 8 C 0.065 3.935 9 F -0.127 7.127 10 C -0.167 4.167 11 C 0.364 3.636 12 O -0.457 6.457 13 C -0.580 4.580 14 H 0.090 0.910 15 C -0.131 4.131 16 N -0.395 5.395 17 Si 0.730 3.270 18 H -0.198 1.198 19 H -0.204 1.204 20 H -0.188 1.188 21 H 0.051 0.949 22 H 0.059 0.941 23 H 0.091 0.909 24 H 0.083 0.917 25 H 0.104 0.896 26 H 0.157 0.843 27 H 0.146 0.854 28 H 0.145 0.855 29 H 0.146 0.854 30 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -2.413 9.062 -3.866 10.144 hybrid contribution -0.824 -0.663 -0.378 1.123 sum -3.237 8.399 -4.244 9.951 Atomic orbital electron populations 1.21412 0.82054 1.01256 0.99603 1.48057 1.05184 1.04740 1.80054 1.19999 0.98836 0.87227 0.90333 1.20492 0.93053 0.94070 0.98510 1.21425 0.97813 0.97937 0.94486 1.21025 0.98869 0.96742 0.94851 1.21024 0.94419 1.02010 1.00742 1.17653 0.88813 0.95295 0.91774 1.91450 1.66628 1.72692 1.81955 1.20990 1.00892 1.01321 0.93464 1.18266 0.87014 0.82160 0.76191 1.90567 1.13930 1.86145 1.55063 1.20995 0.94467 0.89449 1.53040 0.90984 1.25716 0.94604 1.00145 0.92682 1.70011 1.07281 1.27300 1.34909 0.86394 0.80340 0.81402 0.78880 1.19812 1.20408 1.18828 0.94887 0.94119 0.90896 0.91717 0.89591 0.84259 0.85405 0.85485 0.85397 0.92109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 1.85 10.10 59.85 0.60 2.45 16 2 N -0.64 -14.23 2.86 -184.64 -0.53 -14.76 16 3 C 0.16 3.02 5.53 -5.20 -0.03 2.99 16 4 C -0.06 -1.06 5.46 -104.64 -0.57 -1.64 16 5 C -0.10 -1.79 9.70 -39.57 -0.38 -2.18 16 6 C -0.10 -1.51 10.04 -39.60 -0.40 -1.91 16 7 C -0.16 -2.41 10.03 -39.52 -0.40 -2.80 16 8 C 0.08 1.32 7.30 -39.42 -0.29 1.03 16 9 F -0.15 -2.29 17.27 2.25 0.04 -2.25 16 10 C -0.15 -2.37 9.68 -39.51 -0.38 -2.75 16 11 C 0.56 15.36 7.60 -12.99 -0.10 15.26 16 12 O -0.57 -17.55 14.16 5.20 0.07 -17.48 16 13 C -0.54 -14.98 8.65 -35.63 -0.31 -15.29 16 14 H 0.07 1.83 6.15 -52.48 -0.32 1.51 16 15 C 0.09 2.42 5.49 -17.37 -0.10 2.32 16 16 N -0.77 -22.42 11.86 55.55 0.66 -21.76 16 17 Si 0.91 19.87 29.56 -169.99 -5.03 14.84 16 18 H -0.27 -5.90 7.11 56.52 0.40 -5.50 16 19 H -0.28 -6.00 7.11 56.52 0.40 -5.59 16 20 H -0.26 -5.60 7.11 56.52 0.40 -5.20 16 21 H 0.03 0.56 8.14 -51.93 -0.42 0.13 16 22 H 0.04 0.62 8.07 -51.93 -0.42 0.21 16 23 H 0.07 1.40 6.20 -51.93 -0.32 1.08 16 24 H 0.06 1.00 8.02 -51.93 -0.42 0.59 16 25 H 0.09 1.75 7.37 -51.93 -0.38 1.36 16 26 H 0.14 2.83 7.58 -52.49 -0.40 2.43 16 27 H 0.13 1.67 8.06 -52.49 -0.42 1.25 16 28 H 0.13 1.55 8.06 -52.49 -0.42 1.13 16 29 H 0.13 1.81 8.06 -52.49 -0.42 1.39 16 30 H 0.27 7.13 8.29 -40.82 -0.34 6.80 16 LS Contribution 270.61 15.07 4.08 4.08 Total: -1.00 -32.11 270.61 -6.14 -38.24 By element: Atomic # 1 Polarization: 4.67 SS G_CDS: -3.09 Total: 1.59 kcal Atomic # 6 Polarization: -0.16 SS G_CDS: -2.35 Total: -2.51 kcal Atomic # 7 Polarization: -36.65 SS G_CDS: 0.13 Total: -36.52 kcal Atomic # 8 Polarization: -17.55 SS G_CDS: 0.07 Total: -17.48 kcal Atomic # 9 Polarization: -2.29 SS G_CDS: 0.04 Total: -2.25 kcal Atomic # 14 Polarization: 19.87 SS G_CDS: -5.03 Total: 14.84 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -32.11 -6.14 -38.24 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020266757.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.136 kcal (2) G-P(sol) polarization free energy of solvation -32.108 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.244 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.244 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.380 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds