Wall clock time and date at job start Sun Mar 29 2020 21:36:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 N 1.46497 * 109.47565 * 2 1 4 4 C 1.36876 * 120.00283 * 80.55973 * 3 2 1 5 5 H 1.08000 * 120.00141 * 172.62679 * 4 3 2 6 6 C 1.39049 * 119.99502 * 352.62176 * 4 3 2 7 7 N 1.31358 * 120.00489 * 19.22518 * 6 4 3 8 8 Si 1.86800 * 119.99713 * 199.22335 * 6 4 3 9 9 H 1.48500 * 109.47458 * 89.99733 * 8 6 4 10 10 H 1.48496 * 109.47296 * 210.00365 * 8 6 4 11 11 H 1.48505 * 109.47150 * 330.00278 * 8 6 4 12 12 C 1.34777 * 119.99977 * 260.56004 * 3 2 1 13 13 O 1.21591 * 119.99976 * 180.82480 * 12 3 2 14 14 C 1.47735 * 119.99852 * 0.82931 * 12 3 2 15 15 C 1.39670 * 120.13759 * 217.82572 * 14 12 3 16 16 C 1.37919 * 119.89916 * 180.02562 * 15 14 12 17 17 C 1.38362 * 120.17926 * 359.97438 * 16 15 14 18 18 C 1.38571 * 120.27871 * 0.04221 * 17 16 15 19 19 F 1.35103 * 119.94982 * 180.02562 * 18 17 16 20 20 C 1.38185 * 120.10024 * 359.95924 * 18 17 16 21 21 H 1.08995 * 109.47644 * 161.65066 * 1 2 3 22 22 H 1.09002 * 109.47259 * 281.65605 * 1 2 3 23 23 H 1.08999 * 109.46713 * 41.65562 * 1 2 3 24 24 H 1.09000 * 109.47372 * 239.99541 * 2 1 3 25 25 H 1.09007 * 109.47098 * 119.99589 * 2 1 3 26 26 H 0.96995 * 120.00366 * 179.97438 * 7 6 4 27 27 H 1.07999 * 120.05080 * 359.97438 * 15 14 12 28 28 H 1.07997 * 119.91266 * 180.02562 * 16 15 14 29 29 H 1.08002 * 119.85706 * 180.02562 * 17 16 15 30 30 H 1.08000 * 120.09061 * 180.29590 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0184 1.3811 0.0000 4 6 2.0633 2.0912 1.1693 5 1 2.5322 3.0639 1.1928 6 6 1.5051 1.5603 2.3269 7 7 1.2797 0.2692 2.4151 8 14 1.0758 2.6832 3.7567 9 1 -0.3194 3.1682 3.6036 10 1 1.2016 1.9318 5.0313 11 1 2.0039 3.8424 3.7717 12 6 2.4235 1.9526 -1.1514 13 8 2.8430 3.0939 -1.1490 14 6 2.3579 1.1924 -2.4164 15 6 3.3690 1.3295 -3.3702 16 6 3.3024 0.6179 -4.5498 17 6 2.2372 -0.2317 -4.7904 18 6 1.2299 -0.3731 -3.8494 19 9 0.1931 -1.2049 -4.0910 20 6 1.2849 0.3344 -2.6637 21 1 -0.3634 -0.9753 -0.3235 22 1 -0.3634 0.2076 1.0065 23 1 -0.3633 0.7678 -0.6831 24 1 1.8933 -0.5139 -0.8899 25 1 1.8933 -0.5138 0.8901 26 1 0.8906 -0.1012 3.2227 27 1 4.2012 1.9924 -3.1847 28 1 4.0843 0.7234 -5.2872 29 1 2.1906 -0.7868 -5.7157 30 1 0.5021 0.2205 -1.9284 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000045049297.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:36:20 Heat of formation + Delta-G solvation = -25.416714 kcal Electronic energy + Delta-G solvation = -16857.927595 eV Core-core repulsion = 13955.048175 eV Total energy + Delta-G solvation = -2902.879420 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 237.091 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -48.60821 -39.53392 -37.42621 -35.30550 -32.27672 -30.67283 -30.10222 -29.43902 -25.50157 -23.14492 -22.33983 -22.01272 -19.58163 -17.27103 -16.83632 -16.39180 -15.91701 -15.42008 -15.22977 -14.59511 -14.11150 -14.02789 -13.65587 -12.91320 -12.74068 -12.45275 -12.05698 -11.79573 -11.55779 -11.41117 -11.12437 -10.94696 -10.72168 -10.40574 -10.20547 -10.02261 -9.09751 -8.70243 -8.49064 -8.36730 -7.89110 -6.32160 -3.92357 1.27759 1.51092 3.08776 3.19370 3.24228 3.57653 3.99213 4.20165 4.49654 4.76873 5.00380 5.09006 5.19706 5.46527 5.56789 5.65997 6.03932 6.16036 6.32425 6.33145 6.46262 6.51824 6.55808 6.64097 6.79135 7.16852 7.24798 7.40129 7.62817 7.97606 8.43682 9.04231 9.30440 9.86450 10.48353 Molecular weight = 237.09amu Principal moments of inertia in cm(-1) A = 0.036725 B = 0.007964 C = 0.006844 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 762.230579 B = 3515.150897 C = 4090.087136 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.082 3.918 3 N -0.422 5.422 4 C -0.296 4.296 5 H 0.109 0.891 6 C 0.031 3.969 7 N -0.864 5.864 8 Si 0.930 3.070 9 H -0.276 1.276 10 H -0.283 1.283 11 H -0.268 1.268 12 C 0.464 3.536 13 O -0.591 6.591 14 C -0.062 4.062 15 C -0.092 4.092 16 C -0.102 4.102 17 C -0.158 4.158 18 C 0.085 3.915 19 F -0.145 7.145 20 C -0.151 4.151 21 H 0.042 0.958 22 H 0.080 0.920 23 H 0.036 0.964 24 H 0.042 0.958 25 H 0.142 0.858 26 H 0.269 0.731 27 H 0.133 0.867 28 H 0.131 0.869 29 H 0.129 0.871 30 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.257 -4.217 -7.816 8.885 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.041 4.041 3 N -0.137 5.137 4 C -0.424 4.424 5 H 0.126 0.874 6 C -0.172 4.172 7 N -0.504 5.504 8 Si 0.756 3.244 9 H -0.202 1.202 10 H -0.209 1.209 11 H -0.192 1.192 12 C 0.254 3.746 13 O -0.478 6.478 14 C -0.066 4.066 15 C -0.112 4.112 16 C -0.120 4.120 17 C -0.177 4.177 18 C 0.066 3.934 19 F -0.123 7.123 20 C -0.170 4.170 21 H 0.061 0.939 22 H 0.099 0.901 23 H 0.055 0.945 24 H 0.060 0.940 25 H 0.159 0.841 26 H 0.081 0.919 27 H 0.151 0.849 28 H 0.148 0.852 29 H 0.147 0.853 30 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -0.176 -3.837 -7.593 8.509 hybrid contribution -0.554 0.107 0.534 0.777 sum -0.730 -3.730 -7.059 8.017 Atomic orbital electron populations 1.22258 0.97370 0.98668 1.02944 1.22482 0.94177 0.83789 1.03660 1.43832 1.51962 1.11848 1.06046 1.19857 1.35011 1.02017 0.85533 0.87353 1.25310 0.96583 0.96107 0.99200 1.69758 1.42132 1.10223 1.28276 0.85858 0.79348 0.79961 0.79233 1.20179 1.20866 1.19214 1.17746 0.86532 0.87317 0.83052 1.90614 1.52869 1.18361 1.85986 1.20156 0.94265 0.95818 0.96345 1.21266 0.98542 0.98657 0.92721 1.20863 0.97679 0.96288 0.97218 1.21113 0.94988 1.02047 0.99548 1.17605 0.86595 0.93549 0.95652 1.91467 1.56528 1.69716 1.94627 1.22286 1.01148 0.96741 0.96836 0.93942 0.90140 0.94489 0.93979 0.84127 0.91899 0.84937 0.85160 0.85274 0.82259 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.19 8.17 37.15 0.30 -2.89 16 2 C 0.08 1.84 4.87 -4.05 -0.02 1.82 16 3 N -0.42 -10.73 2.64 -115.93 -0.31 -11.04 16 4 C -0.30 -8.00 9.44 -15.00 -0.14 -8.15 16 5 H 0.11 3.09 7.25 -52.49 -0.38 2.71 16 6 C 0.03 0.77 4.96 -17.45 -0.09 0.68 16 7 N -0.86 -21.06 8.01 55.50 0.44 -20.62 16 8 Si 0.93 19.91 29.59 -169.99 -5.03 14.88 16 9 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 10 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 11 H -0.27 -5.80 7.11 56.52 0.40 -5.40 16 12 C 0.46 11.68 7.31 -12.38 -0.09 11.58 16 13 O -0.59 -16.69 16.47 5.29 0.09 -16.60 16 14 C -0.06 -1.28 5.20 -104.98 -0.55 -1.83 16 15 C -0.09 -1.62 9.62 -39.16 -0.38 -2.00 16 16 C -0.10 -1.44 10.03 -39.65 -0.40 -1.84 16 17 C -0.16 -2.23 10.02 -39.41 -0.39 -2.63 16 18 C 0.09 1.41 7.29 -39.48 -0.29 1.12 16 19 F -0.14 -2.35 17.26 2.25 0.04 -2.31 16 20 C -0.15 -2.84 7.41 -39.09 -0.29 -3.13 16 21 H 0.04 0.75 8.14 -51.93 -0.42 0.33 16 22 H 0.08 1.80 6.19 -51.93 -0.32 1.48 16 23 H 0.04 0.76 6.75 -51.93 -0.35 0.41 16 24 H 0.04 0.87 5.10 -51.93 -0.26 0.61 16 25 H 0.14 3.41 5.43 -51.93 -0.28 3.13 16 26 H 0.27 6.21 8.31 -40.82 -0.34 5.87 16 27 H 0.13 2.27 8.04 -52.49 -0.42 1.85 16 28 H 0.13 1.37 8.06 -52.49 -0.42 0.95 16 29 H 0.13 1.45 8.06 -52.49 -0.42 1.03 16 30 H 0.16 3.07 3.15 -52.49 -0.17 2.90 16 LS Contribution 254.09 15.07 3.83 3.83 Total: -1.00 -28.42 254.09 -5.85 -34.27 By element: Atomic # 1 Polarization: 7.43 SS G_CDS: -2.59 Total: 4.84 kcal Atomic # 6 Polarization: -4.92 SS G_CDS: -2.33 Total: -7.25 kcal Atomic # 7 Polarization: -31.79 SS G_CDS: 0.14 Total: -31.65 kcal Atomic # 8 Polarization: -16.69 SS G_CDS: 0.09 Total: -16.60 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 0.04 Total: -2.31 kcal Atomic # 14 Polarization: 19.91 SS G_CDS: -5.03 Total: 14.88 kcal Total LS contribution 3.83 Total: 3.83 kcal Total: -28.42 -5.85 -34.27 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000045049297.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.854 kcal (2) G-P(sol) polarization free energy of solvation -28.418 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.563 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.271 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.417 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds