Wall clock time and date at job start Sun Mar 29 2020 21:35:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.08996 * 109.46643 * 2 1 4 4 C 1.50700 * 109.47160 * 119.99971 * 2 1 3 5 5 H 1.08003 * 120.00232 * 119.99782 * 4 2 1 6 6 C 1.37878 * 119.99863 * 300.00254 * 4 2 1 7 7 N 1.31511 * 120.00331 * 359.97438 * 6 4 2 8 8 Si 1.86798 * 119.99823 * 179.97438 * 6 4 2 9 9 H 1.48500 * 109.47365 * 60.00067 * 8 6 4 10 10 H 1.48502 * 109.47102 * 179.97438 * 8 6 4 11 11 H 1.48503 * 109.47380 * 299.99931 * 8 6 4 12 12 N 1.46501 * 109.47050 * 239.99869 * 2 1 3 13 13 C 1.34772 * 119.99773 * 85.00011 * 12 2 1 14 14 O 1.21569 * 120.00433 * 359.97438 * 13 12 2 15 15 C 1.47723 * 119.99915 * 179.97438 * 13 12 2 16 16 C 1.39657 * 120.12002 * 180.02562 * 15 13 12 17 17 C 1.37837 * 119.87874 * 180.27884 * 16 15 13 18 18 C 1.38650 * 120.12065 * 359.49436 * 17 16 15 19 19 F 1.35098 * 119.88460 * 180.23581 * 18 17 16 20 20 C 1.38661 * 120.23518 * 0.50775 * 18 17 16 21 21 C 1.37828 * 120.12419 * 359.74814 * 20 18 17 22 22 H 1.09000 * 109.47524 * 299.99765 * 1 2 3 23 23 H 1.08997 * 109.47396 * 60.00299 * 1 2 3 24 24 H 1.09001 * 109.47069 * 179.97438 * 1 2 3 25 25 H 0.97000 * 120.00100 * 180.02562 * 7 6 4 26 26 H 0.96995 * 120.00283 * 265.00281 * 12 2 1 27 27 H 1.08002 * 120.05563 * 359.97438 * 16 15 13 28 28 H 1.08004 * 119.93589 * 179.72559 * 17 16 15 29 29 H 1.08003 * 119.93701 * 179.72918 * 20 18 17 30 30 H 1.07998 * 120.06457 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0277 0.0000 4 6 2.0323 -0.7104 1.2305 5 1 2.6532 -1.5885 1.1314 6 6 1.6992 -0.2393 2.4827 7 7 0.9435 0.8302 2.6034 8 14 2.3213 -1.1203 4.0079 9 1 3.8063 -1.1209 4.0082 10 1 1.8268 -0.4199 5.2204 11 1 1.8258 -2.5203 4.0077 12 7 2.0183 -0.6906 -1.1962 13 6 2.1470 -0.0183 -2.3571 14 8 1.8575 1.1611 -2.4119 15 6 2.6399 -0.7145 -3.5631 16 6 2.7748 -0.0201 -4.7673 17 6 3.2297 -0.6761 -5.8910 18 6 3.5632 -2.0203 -5.8248 19 9 4.0131 -2.6573 -6.9279 20 6 3.4312 -2.7145 -4.6317 21 6 2.9723 -2.0697 -3.5034 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 0.7094 1.1618 3.4844 26 1 2.2490 -1.6318 -1.1526 27 1 2.5183 1.0277 -4.8191 28 1 3.3301 -0.1411 -6.8238 29 1 3.6882 -3.7625 -4.5867 30 1 2.8694 -2.6114 -2.5747 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000050336410.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:35:57 Heat of formation + Delta-G solvation = -64.225566 kcal Electronic energy + Delta-G solvation = -15936.667837 eV Core-core repulsion = 13032.105539 eV Total energy + Delta-G solvation = -2904.562298 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 237.091 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -49.05012 -39.72701 -37.79954 -34.87751 -32.59736 -31.20657 -30.79132 -28.57505 -25.29404 -23.74012 -23.00631 -21.10717 -19.59074 -18.22891 -17.41050 -16.43577 -15.88043 -15.73366 -15.15700 -14.84023 -14.31737 -14.16913 -13.73134 -13.33171 -13.20907 -12.52723 -12.44450 -12.20925 -11.68969 -11.12846 -11.09808 -10.98238 -10.77991 -10.36450 -10.26293 -9.25217 -9.24244 -9.09487 -8.78280 -8.58344 -7.97330 -6.15138 -4.24974 0.75173 1.14604 3.08005 3.23998 3.29520 3.30392 3.95290 4.03049 4.08677 4.34264 4.61124 4.74164 5.07554 5.17135 5.19455 5.35572 5.76041 5.83531 5.98151 6.12187 6.30951 6.71410 6.79867 6.92948 7.10721 7.38140 7.50931 7.65171 7.87101 8.10936 8.57698 8.72640 9.01752 9.42409 10.90829 Molecular weight = 237.09amu Principal moments of inertia in cm(-1) A = 0.043704 B = 0.005214 C = 0.004809 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 640.524010 B = 5368.490398 C = 5821.426051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C 0.263 3.737 3 H 0.051 0.949 4 C -0.536 4.536 5 H 0.061 0.939 6 C 0.067 3.933 7 N -0.883 5.883 8 Si 0.903 3.097 9 H -0.276 1.276 10 H -0.285 1.285 11 H -0.276 1.276 12 N -0.700 5.700 13 C 0.542 3.458 14 O -0.549 6.549 15 C -0.131 4.131 16 C -0.037 4.037 17 C -0.163 4.163 18 C 0.109 3.891 19 F -0.140 7.140 20 C -0.161 4.161 21 C -0.060 4.060 22 H 0.091 0.909 23 H 0.015 0.985 24 H 0.027 0.973 25 H 0.265 0.735 26 H 0.388 0.612 27 H 0.146 0.854 28 H 0.139 0.861 29 H 0.139 0.861 30 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.839 -6.563 -12.746 14.842 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.162 3.838 3 H 0.069 0.931 4 C -0.574 4.574 5 H 0.079 0.921 6 C -0.136 4.136 7 N -0.520 5.520 8 Si 0.730 3.270 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.201 1.201 12 N -0.348 5.348 13 C 0.327 3.673 14 O -0.429 6.429 15 C -0.134 4.134 16 C -0.056 4.056 17 C -0.182 4.182 18 C 0.090 3.910 19 F -0.119 7.119 20 C -0.180 4.180 21 C -0.079 4.079 22 H 0.110 0.890 23 H 0.034 0.966 24 H 0.046 0.954 25 H 0.075 0.925 26 H 0.222 0.778 27 H 0.164 0.836 28 H 0.157 0.843 29 H 0.157 0.843 30 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 3.541 -5.612 -12.612 14.252 hybrid contribution 0.507 -1.109 0.663 1.388 sum 4.049 -6.721 -11.950 14.296 Atomic orbital electron populations 1.22082 0.98270 0.99214 1.01022 1.18806 0.91158 0.94082 0.79755 0.93133 1.21158 1.32680 1.13327 0.90284 0.92101 1.24881 0.94747 0.94937 0.99057 1.69888 1.35695 1.22347 1.24068 0.86492 0.79172 0.79575 0.81758 1.20161 1.21096 1.20141 1.46507 1.64313 1.13550 1.10400 1.18122 0.79067 0.86822 0.83303 1.90738 1.51569 1.15560 1.85057 1.20444 1.03093 0.94325 0.95564 1.21185 0.93507 1.00776 0.90159 1.21108 1.03635 0.93030 1.00393 1.17935 0.98771 0.91185 0.83127 1.91495 1.86614 1.82071 1.51725 1.21058 1.04049 1.01168 0.91716 1.21283 0.94848 0.93506 0.98273 0.89033 0.96557 0.95400 0.92453 0.77833 0.83638 0.84330 0.84326 0.84294 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.63 9.26 37.16 0.34 -3.28 16 2 C 0.26 6.63 2.56 -69.08 -0.18 6.45 16 3 H 0.05 1.47 7.58 -51.93 -0.39 1.07 16 4 C -0.54 -13.97 8.73 -34.44 -0.30 -14.27 16 5 H 0.06 1.50 7.74 -52.48 -0.41 1.10 16 6 C 0.07 1.78 5.30 -17.82 -0.09 1.69 16 7 N -0.88 -24.57 11.32 55.43 0.63 -23.94 16 8 Si 0.90 20.33 29.54 -169.99 -5.02 15.31 16 9 H -0.28 -6.18 7.11 56.52 0.40 -5.78 16 10 H -0.29 -6.42 7.11 56.52 0.40 -6.02 16 11 H -0.28 -6.09 7.11 56.52 0.40 -5.69 16 12 N -0.70 -14.40 5.02 -55.92 -0.28 -14.68 16 13 C 0.54 10.86 7.73 -12.39 -0.10 10.77 16 14 O -0.55 -13.05 16.01 5.31 0.08 -12.97 16 15 C -0.13 -2.02 5.87 -104.96 -0.62 -2.64 16 16 C -0.04 -0.51 9.59 -39.20 -0.38 -0.89 16 17 C -0.16 -1.88 10.01 -39.58 -0.40 -2.28 16 18 C 0.11 1.28 7.31 -39.27 -0.29 1.00 16 19 F -0.14 -1.65 17.26 2.25 0.04 -1.61 16 20 C -0.16 -1.80 10.01 -39.58 -0.40 -2.20 16 21 C -0.06 -0.76 9.54 -39.20 -0.37 -1.13 16 22 H 0.09 2.44 6.07 -51.93 -0.32 2.13 16 23 H 0.02 0.38 8.14 -51.93 -0.42 -0.05 16 24 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 25 H 0.27 7.02 8.31 -40.82 -0.34 6.69 16 26 H 0.39 6.77 6.57 -40.82 -0.27 6.50 16 27 H 0.15 1.98 7.65 -52.49 -0.40 1.58 16 28 H 0.14 1.26 8.06 -52.48 -0.42 0.84 16 29 H 0.14 1.21 8.06 -52.48 -0.42 0.79 16 30 H 0.14 1.52 6.40 -52.49 -0.34 1.19 16 LS Contribution 269.09 15.07 4.06 4.06 Total: -1.00 -29.85 269.09 -6.21 -36.06 By element: Atomic # 1 Polarization: 7.50 SS G_CDS: -2.95 Total: 4.56 kcal Atomic # 6 Polarization: -4.01 SS G_CDS: -2.77 Total: -6.78 kcal Atomic # 7 Polarization: -38.97 SS G_CDS: 0.35 Total: -38.62 kcal Atomic # 8 Polarization: -13.05 SS G_CDS: 0.08 Total: -12.97 kcal Atomic # 9 Polarization: -1.65 SS G_CDS: 0.04 Total: -1.61 kcal Atomic # 14 Polarization: 20.33 SS G_CDS: -5.02 Total: 15.31 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -29.85 -6.21 -36.06 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000050336410.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.165 kcal (2) G-P(sol) polarization free energy of solvation -29.851 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.015 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.210 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.061 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.226 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds