Wall clock time and date at job start Sun Mar 29 2020 22:17:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52994 * 109.47266 * 2 1 4 4 N 1.46906 * 109.46958 * 119.99823 * 2 1 3 5 5 C 1.46902 * 110.99573 * 299.99941 * 4 2 1 6 6 C 1.50707 * 109.46656 * 179.97438 * 5 4 2 7 7 H 1.07995 * 120.00358 * 0.02562 * 6 5 4 8 8 C 1.37877 * 119.99768 * 179.97438 * 6 5 4 9 9 N 1.31515 * 120.00203 * 359.97438 * 8 6 5 10 10 Si 1.86801 * 120.00034 * 180.02562 * 8 6 5 11 11 H 1.48501 * 109.47238 * 60.00017 * 10 8 6 12 12 H 1.48494 * 109.47094 * 180.02562 * 10 8 6 13 13 H 1.48498 * 109.46981 * 299.99863 * 10 8 6 14 14 C 1.50699 * 109.47163 * 239.99585 * 2 1 3 15 15 C 1.38246 * 119.97538 * 239.73047 * 14 2 1 16 16 C 1.38193 * 120.02523 * 179.72847 * 15 14 2 17 17 C 1.38458 * 119.97553 * 0.56587 * 16 15 14 18 18 F 1.35102 * 120.02872 * 179.68743 * 17 16 15 19 19 C 1.38460 * 119.94702 * 359.70511 * 17 16 15 20 20 C 1.38198 * 119.97307 * 0.02562 * 19 17 16 21 21 H 1.08997 * 109.47598 * 300.00446 * 1 2 3 22 22 H 1.09002 * 109.46781 * 60.00248 * 1 2 3 23 23 H 1.09000 * 109.47321 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.47331 * 179.97438 * 3 2 1 25 25 H 1.09002 * 109.47018 * 299.99607 * 3 2 1 26 26 H 1.08999 * 109.47836 * 59.99633 * 3 2 1 27 27 H 1.00896 * 111.00309 * 176.04353 * 4 2 1 28 28 H 1.08990 * 109.47358 * 299.99539 * 5 4 2 29 29 H 1.09004 * 109.47457 * 60.00221 * 5 4 2 30 30 H 0.96997 * 120.00560 * 179.97438 * 9 8 6 31 31 H 1.08001 * 119.98316 * 359.97438 * 15 14 2 32 32 H 1.08006 * 120.01403 * 180.25484 * 16 15 14 33 33 H 1.08000 * 120.01196 * 179.97438 * 19 17 16 34 34 H 1.08004 * 119.98599 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 7 2.0196 -0.6925 1.1995 5 6 1.5485 -0.0262 2.4211 6 6 2.0691 -0.7636 3.6280 7 1 2.6883 -1.6392 3.5003 8 6 1.7557 -0.3196 4.8951 9 7 1.0030 0.7475 5.0506 10 14 2.4015 -1.2331 6.3911 11 1 3.8864 -1.2334 6.3681 12 1 1.9253 -0.5597 7.6259 13 1 1.9059 -2.6327 6.3685 14 6 2.0323 -0.7105 -1.2304 15 6 2.8317 -1.8312 -1.1029 16 6 3.2883 -2.4868 -2.2305 17 6 2.9546 -2.0140 -3.4883 18 9 3.4056 -2.6505 -4.5914 19 6 2.1585 -0.8882 -3.6148 20 6 1.6985 -0.2375 -2.4858 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0276 0.0005 24 1 3.1300 1.4424 0.0005 25 1 1.6767 1.9562 -0.8900 26 1 1.6767 1.9564 0.8899 27 1 3.0261 -0.7626 1.1911 28 1 1.9120 1.0011 2.4379 29 1 0.4586 -0.0264 2.4379 30 1 0.7822 1.0596 5.9421 31 1 3.0961 -2.1967 -0.1216 32 1 3.9094 -3.3648 -2.1306 33 1 1.8979 -0.5183 -4.5955 34 1 1.0779 0.6409 -2.5842 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000839515298.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:17:03 Heat of formation + Delta-G solvation = -25.449998 kcal Electronic energy + Delta-G solvation = -16497.908347 eV Core-core repulsion = 13730.860579 eV Total energy + Delta-G solvation = -2767.047768 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 237.122 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -48.80185 -39.54550 -36.60269 -33.00462 -31.29221 -30.54897 -28.81402 -26.88617 -26.22064 -23.28667 -22.61183 -21.49585 -18.87993 -17.69880 -16.77835 -16.10454 -15.50331 -15.35044 -14.67078 -14.38632 -13.93899 -13.83848 -13.39410 -12.97122 -12.88010 -12.75778 -12.30931 -11.83530 -11.75212 -11.53169 -11.16944 -10.90998 -10.87063 -10.62331 -10.55516 -10.33605 -9.82248 -9.19608 -8.96733 -8.49838 -8.37381 -7.34638 -6.05306 -4.06760 1.29206 1.37973 3.32133 3.36400 3.39197 3.74320 4.36711 4.40628 4.79695 4.93741 4.97773 5.11226 5.30939 5.45404 5.48983 5.60816 5.61484 5.98358 6.02308 6.07878 6.17465 6.23595 6.25841 6.33031 6.45272 6.65272 6.71127 6.78853 7.04652 7.26791 7.42418 7.75615 8.10444 8.33767 8.56384 9.01621 9.57879 11.05628 Molecular weight = 237.12amu Principal moments of inertia in cm(-1) A = 0.040029 B = 0.005354 C = 0.004881 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 699.329085 B = 5228.862028 C = 5735.105861 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.132 4.132 2 C 0.145 3.855 3 C -0.176 4.176 4 N -0.679 5.679 5 C 0.190 3.810 6 C -0.515 4.515 7 H 0.060 0.940 8 C 0.057 3.943 9 N -0.898 5.898 10 Si 0.898 3.102 11 H -0.277 1.277 12 H -0.288 1.288 13 H -0.276 1.276 14 C -0.067 4.067 15 C -0.074 4.074 16 C -0.155 4.155 17 C 0.081 3.919 18 F -0.148 7.148 19 C -0.158 4.158 20 C -0.091 4.091 21 H 0.068 0.932 22 H 0.048 0.952 23 H 0.060 0.940 24 H 0.051 0.949 25 H 0.050 0.950 26 H 0.071 0.929 27 H 0.329 0.671 28 H -0.006 1.006 29 H 0.034 0.966 30 H 0.262 0.738 31 H 0.148 0.852 32 H 0.131 0.869 33 H 0.129 0.871 34 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.921 -1.408 -14.480 14.674 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C 0.053 3.947 3 C -0.235 4.235 4 N -0.309 5.309 5 C 0.064 3.936 6 C -0.554 4.554 7 H 0.079 0.921 8 C -0.144 4.144 9 N -0.537 5.537 10 Si 0.726 3.274 11 H -0.203 1.203 12 H -0.214 1.214 13 H -0.202 1.202 14 C -0.067 4.067 15 C -0.092 4.092 16 C -0.174 4.174 17 C 0.061 3.939 18 F -0.127 7.127 19 C -0.176 4.176 20 C -0.109 4.109 21 H 0.087 0.913 22 H 0.067 0.933 23 H 0.079 0.921 24 H 0.070 0.930 25 H 0.069 0.931 26 H 0.090 0.910 27 H 0.146 0.854 28 H 0.011 0.989 29 H 0.052 0.948 30 H 0.071 0.929 31 H 0.165 0.835 32 H 0.149 0.851 33 H 0.147 0.853 34 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 1.336 -1.783 -14.359 14.530 hybrid contribution 0.940 0.264 0.662 1.180 sum 2.276 -1.519 -13.697 13.967 Atomic orbital electron populations 1.21851 0.93319 1.02362 1.01452 1.19742 0.95456 0.90646 0.88851 1.22556 1.01009 0.97609 1.02287 1.60950 1.15064 1.53270 1.01657 1.19662 0.96588 0.92376 0.84973 1.21150 1.31627 1.12296 0.90328 0.92132 1.24957 0.95281 0.95110 0.99079 1.69939 1.37314 1.23644 1.22823 0.86566 0.79140 0.79911 0.81807 1.20310 1.21369 1.20190 1.20097 0.96562 0.95607 0.94463 1.21148 0.95142 0.94011 0.98900 1.21185 1.03168 1.01982 0.91073 1.17730 0.99384 0.94057 0.82681 1.91460 1.87731 1.81328 1.52157 1.21014 1.00545 0.96156 0.99932 1.20840 0.99322 0.99598 0.91151 0.91295 0.93321 0.92094 0.93020 0.93064 0.91007 0.85355 0.98878 0.94814 0.92868 0.83467 0.85101 0.85295 0.85343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.16 8.05 37.16 0.30 -1.87 16 2 C 0.15 2.42 0.79 -132.75 -0.11 2.31 16 3 C -0.18 -2.79 8.04 37.15 0.30 -2.50 16 4 N -0.68 -13.57 5.09 -102.39 -0.52 -14.09 16 5 C 0.19 4.70 4.65 -4.97 -0.02 4.67 16 6 C -0.52 -14.12 9.32 -34.44 -0.32 -14.44 16 7 H 0.06 1.63 7.81 -52.49 -0.41 1.22 16 8 C 0.06 1.60 5.46 -17.82 -0.10 1.50 16 9 N -0.90 -26.18 13.29 55.43 0.74 -25.44 16 10 Si 0.90 21.34 29.54 -169.99 -5.02 16.32 16 11 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 12 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 13 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 14 C -0.07 -0.98 4.77 -104.62 -0.50 -1.48 16 15 C -0.07 -1.07 9.14 -39.59 -0.36 -1.44 16 16 C -0.16 -2.06 10.03 -39.52 -0.40 -2.46 16 17 C 0.08 1.07 7.30 -39.42 -0.29 0.79 16 18 F -0.15 -2.00 17.27 2.25 0.04 -1.96 16 19 C -0.16 -1.94 10.03 -39.51 -0.40 -2.34 16 20 C -0.09 -1.16 8.71 -39.60 -0.34 -1.51 16 21 H 0.07 1.25 6.40 -51.93 -0.33 0.92 16 22 H 0.05 0.65 7.39 -51.93 -0.38 0.27 16 23 H 0.06 1.03 8.14 -51.93 -0.42 0.60 16 24 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 25 H 0.05 0.69 7.39 -51.93 -0.38 0.30 16 26 H 0.07 1.29 6.40 -51.93 -0.33 0.96 16 27 H 0.33 6.34 7.53 -39.29 -0.30 6.04 16 28 H -0.01 -0.17 6.30 -51.93 -0.33 -0.50 16 29 H 0.03 0.90 6.30 -51.93 -0.33 0.57 16 30 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 31 H 0.15 2.20 6.39 -52.49 -0.34 1.86 16 32 H 0.13 1.49 8.06 -52.48 -0.42 1.07 16 33 H 0.13 1.30 8.06 -52.49 -0.42 0.87 16 34 H 0.13 1.42 7.10 -52.48 -0.37 1.05 16 LS Contribution 282.53 15.07 4.26 4.26 Total: -1.00 -28.62 282.53 -7.07 -35.69 By element: Atomic # 1 Polarization: 8.31 SS G_CDS: -4.33 Total: 3.98 kcal Atomic # 6 Polarization: -16.52 SS G_CDS: -2.23 Total: -18.75 kcal Atomic # 7 Polarization: -39.75 SS G_CDS: 0.21 Total: -39.54 kcal Atomic # 9 Polarization: -2.00 SS G_CDS: 0.04 Total: -1.96 kcal Atomic # 14 Polarization: 21.34 SS G_CDS: -5.02 Total: 16.32 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -28.62 -7.07 -35.69 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000839515298.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.241 kcal (2) G-P(sol) polarization free energy of solvation -28.620 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.379 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.071 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -25.450 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds