Wall clock time and date at job start Sun Mar 29 2020 22:26:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53006 * 110.53272 * 2 1 4 4 C 1.53003 * 117.49426 * 130.12585 * 3 2 1 5 5 C 1.52998 * 117.49897 * 61.47000 * 3 2 1 6 6 N 1.47307 * 110.60226 * 122.83630 * 2 1 3 7 7 C 1.34524 * 106.61970 * 118.52677 * 6 2 1 8 8 O 1.21542 * 123.76752 * 180.02562 * 7 6 2 9 9 N 1.33785 * 112.45953 * 359.97438 * 7 6 2 10 10 C 1.46506 * 124.17930 * 179.97438 * 9 7 6 11 11 C 1.50696 * 109.46871 * 90.02059 * 10 9 7 12 12 H 1.07999 * 120.00319 * 0.02562 * 11 10 9 13 13 C 1.37885 * 119.99717 * 180.02562 * 11 10 9 14 14 N 1.31516 * 119.99913 * 180.02562 * 13 11 10 15 15 Si 1.86798 * 119.99766 * 0.02562 * 13 11 10 16 16 H 1.48500 * 109.47353 * 269.99586 * 15 13 11 17 17 H 1.48501 * 109.47293 * 30.00037 * 15 13 11 18 18 H 1.48504 * 109.46680 * 149.99835 * 15 13 11 19 19 C 1.34768 * 111.64434 * 0.23222 * 9 7 6 20 20 O 1.21233 * 127.15751 * 179.73354 * 19 9 7 21 21 H 1.09006 * 109.46809 * 297.86499 * 1 2 3 22 22 H 1.09003 * 109.47877 * 57.86369 * 1 2 3 23 23 H 1.08999 * 109.47285 * 177.87012 * 1 2 3 24 24 H 1.08997 * 115.55117 * 275.79059 * 3 2 1 25 25 H 1.08996 * 117.50208 * 0.02562 * 4 3 2 26 26 H 1.09007 * 117.49425 * 145.01897 * 4 3 2 27 27 H 1.08993 * 117.49813 * 214.97848 * 5 3 2 28 28 H 1.09007 * 117.49406 * 359.97438 * 5 3 2 29 29 H 0.96998 * 126.68848 * 298.48296 * 6 2 1 30 30 H 1.09005 * 109.46943 * 330.02379 * 10 9 7 31 31 H 1.09002 * 109.47064 * 210.02642 * 10 9 7 32 32 H 0.97001 * 119.99646 * 179.97438 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0666 1.4329 0.0000 4 6 3.1335 1.7875 1.0378 5 6 1.7074 2.3218 1.1923 6 7 2.0483 -0.7477 1.1586 7 6 2.7599 -1.7771 0.6650 8 8 3.3284 -2.5987 1.3571 9 7 2.7710 -1.7960 -0.6726 10 6 3.4679 -2.8039 -1.4757 11 6 2.5387 -3.9582 -1.7497 12 1 1.5298 -3.9425 -1.3646 13 6 2.9766 -5.0344 -2.4922 14 7 2.1655 -6.0416 -2.7318 15 14 4.7218 -5.0618 -3.1577 16 1 4.7475 -4.4388 -4.5054 17 1 5.6120 -4.3018 -2.2439 18 1 5.1932 -6.4668 -3.2527 19 6 2.0666 -0.7703 -1.1901 20 8 1.8966 -0.5169 -2.3635 21 1 -0.3633 0.4804 0.9086 22 1 -0.3635 0.5466 -0.8702 23 1 -0.3634 -1.0269 -0.0382 24 1 2.1386 1.9079 -0.9784 25 1 3.4533 1.0001 1.7202 26 1 3.9071 2.4964 0.7422 27 1 1.5433 3.3817 0.9984 28 1 1.0883 1.8859 1.9765 29 1 1.9050 -0.5382 2.0947 30 1 4.3415 -3.1621 -0.9310 31 1 3.7850 -2.3606 -2.4197 32 1 2.4734 -6.7985 -3.2544 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000024089560.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:26:02 Heat of formation + Delta-G solvation = -13.421468 kcal Electronic energy + Delta-G solvation = -17484.535775 eV Core-core repulsion = 14640.210902 eV Total energy + Delta-G solvation = -2844.324873 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -42.05298 -38.07673 -37.70286 -35.22221 -34.21650 -32.40553 -30.38218 -28.51096 -25.14856 -23.14061 -22.72334 -22.43582 -20.13787 -19.87838 -17.46150 -17.25187 -16.45471 -15.75858 -15.43167 -15.09820 -14.70564 -14.31461 -13.83216 -13.56744 -13.30039 -12.67511 -12.49578 -12.42139 -11.97317 -11.76579 -11.55622 -11.32365 -10.74385 -10.67421 -10.44353 -10.37402 -10.13125 -9.66871 -9.46656 -9.23161 -8.66656 -8.65047 -6.15670 -4.17188 2.15420 2.83866 3.26863 3.32290 3.34485 3.37730 3.65704 3.77105 4.29707 4.34073 4.36254 4.68446 4.80685 5.11332 5.14756 5.18185 5.42606 5.55451 5.58570 5.73801 5.80662 5.92856 6.00834 6.07325 6.39363 6.64716 6.75780 7.10314 7.42422 7.79623 7.98892 8.33769 8.71881 8.84026 9.40907 10.97244 Molecular weight = 238.11amu Principal moments of inertia in cm(-1) A = 0.037225 B = 0.007525 C = 0.007355 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 752.001484 B = 3720.057897 C = 3805.940989 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.149 3.851 3 C -0.155 4.155 4 C -0.172 4.172 5 C -0.167 4.167 6 N -0.731 5.731 7 C 0.705 3.295 8 O -0.540 6.540 9 N -0.552 5.552 10 C 0.220 3.780 11 C -0.538 4.538 12 H 0.077 0.923 13 C 0.078 3.922 14 N -0.890 5.890 15 Si 0.875 3.125 16 H -0.271 1.271 17 H -0.263 1.263 18 H -0.280 1.280 19 C 0.533 3.467 20 O -0.470 6.470 21 H 0.073 0.927 22 H 0.081 0.919 23 H 0.070 0.930 24 H 0.123 0.877 25 H 0.101 0.899 26 H 0.097 0.903 27 H 0.099 0.901 28 H 0.096 0.904 29 H 0.430 0.570 30 H 0.052 0.948 31 H 0.045 0.955 32 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.985 16.617 7.335 18.190 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C 0.057 3.943 3 C -0.174 4.174 4 C -0.209 4.209 5 C -0.203 4.203 6 N -0.397 5.397 7 C 0.406 3.594 8 O -0.414 6.414 9 N -0.295 5.295 10 C 0.101 3.899 11 C -0.576 4.576 12 H 0.095 0.905 13 C -0.125 4.125 14 N -0.528 5.528 15 Si 0.701 3.299 16 H -0.197 1.197 17 H -0.187 1.187 18 H -0.206 1.206 19 C 0.319 3.681 20 O -0.340 6.340 21 H 0.092 0.908 22 H 0.100 0.900 23 H 0.089 0.911 24 H 0.141 0.859 25 H 0.119 0.881 26 H 0.115 0.885 27 H 0.117 0.883 28 H 0.114 0.886 29 H 0.274 0.726 30 H 0.070 0.930 31 H 0.063 0.937 32 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -0.707 16.000 6.867 17.425 hybrid contribution 0.698 -0.139 -0.013 0.712 sum -0.009 15.861 6.853 17.278 Atomic orbital electron populations 1.21901 0.90416 1.03864 1.03670 1.20859 0.96602 0.91306 0.85487 1.22382 1.05049 0.93269 0.96719 1.23066 0.92306 1.03474 1.02053 1.22956 0.98522 0.99346 0.99523 1.45673 1.56095 1.29541 1.08361 1.15882 0.79579 0.81588 0.82389 1.90964 1.48395 1.40911 1.61083 1.46439 1.48214 1.27624 1.07240 1.19943 0.93608 0.86126 0.90250 1.21117 1.00115 1.01443 1.34901 0.90523 1.24785 0.97645 0.94908 0.95204 1.69878 1.35805 1.08076 1.39006 0.86861 0.84919 0.78078 0.80053 1.19679 1.18733 1.20592 1.20427 0.77676 0.80718 0.89323 1.90729 1.56814 1.69857 1.16571 0.90839 0.89984 0.91088 0.85877 0.88072 0.88469 0.88298 0.88595 0.72641 0.93044 0.93713 0.92268 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.65 8.81 37.15 0.33 -1.32 16 2 C 0.15 2.07 1.15 -132.10 -0.15 1.92 16 3 C -0.15 -1.71 5.21 -90.62 -0.47 -2.19 16 4 C -0.17 -1.67 9.87 -26.69 -0.26 -1.94 16 5 C -0.17 -1.33 9.79 -26.70 -0.26 -1.59 16 6 N -0.73 -10.50 4.34 -52.94 -0.23 -10.73 16 7 C 0.70 14.28 8.62 -88.03 -0.76 13.52 16 8 O -0.54 -12.82 17.48 5.33 0.09 -12.73 16 9 N -0.55 -12.15 2.59 -122.02 -0.32 -12.47 16 10 C 0.22 5.55 4.52 -5.19 -0.02 5.53 16 11 C -0.54 -15.79 9.94 -34.44 -0.34 -16.14 16 12 H 0.08 2.46 8.06 -52.49 -0.42 2.04 16 13 C 0.08 2.30 5.47 -17.82 -0.10 2.20 16 14 N -0.89 -27.50 13.96 55.43 0.77 -26.73 16 15 Si 0.87 21.49 27.47 -169.99 -4.67 16.82 16 16 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 17 H -0.26 -6.18 6.54 56.52 0.37 -5.81 16 18 H -0.28 -6.77 7.11 56.52 0.40 -6.37 16 19 C 0.53 10.42 6.99 -10.55 -0.07 10.34 16 20 O -0.47 -10.26 17.75 5.60 0.10 -10.16 16 21 H 0.07 0.64 7.57 -51.93 -0.39 0.25 16 22 H 0.08 0.92 8.14 -51.93 -0.42 0.49 16 23 H 0.07 0.96 8.14 -51.93 -0.42 0.54 16 24 H 0.12 1.39 8.14 -51.93 -0.42 0.97 16 25 H 0.10 1.06 6.86 -51.93 -0.36 0.70 16 26 H 0.10 0.86 8.14 -51.92 -0.42 0.44 16 27 H 0.10 0.66 8.14 -51.93 -0.42 0.24 16 28 H 0.10 0.67 7.78 -51.92 -0.40 0.27 16 29 H 0.43 4.76 8.75 -40.82 -0.36 4.40 16 30 H 0.05 1.31 6.92 -51.93 -0.36 0.95 16 31 H 0.04 1.11 7.43 -51.93 -0.39 0.72 16 32 H 0.27 7.66 8.31 -40.82 -0.34 7.32 16 LS Contribution 277.12 15.07 4.18 4.18 Total: -1.00 -34.27 277.12 -6.15 -40.42 By element: Atomic # 1 Polarization: 5.01 SS G_CDS: -3.96 Total: 1.05 kcal Atomic # 6 Polarization: 12.46 SS G_CDS: -2.12 Total: 10.34 kcal Atomic # 7 Polarization: -50.15 SS G_CDS: 0.23 Total: -49.92 kcal Atomic # 8 Polarization: -23.08 SS G_CDS: 0.19 Total: -22.89 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -4.67 Total: 16.82 kcal Total LS contribution 4.18 Total: 4.18 kcal Total: -34.27 -6.15 -40.42 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000024089560.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.002 kcal (2) G-P(sol) polarization free energy of solvation -34.274 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.272 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.423 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds