Wall clock time and date at job start Sun Mar 29 2020 23:02:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.53001 * 109.47231 * 2 1 4 4 N 1.46499 * 109.47220 * 179.97438 * 3 2 1 5 5 C 1.36681 * 120.00204 * 264.70864 * 4 3 2 6 6 H 1.08007 * 119.99495 * 136.05773 * 5 4 3 7 7 C 1.39160 * 120.00090 * 316.05778 * 5 4 3 8 8 N 1.31288 * 119.99659 * 2.30900 * 7 5 4 9 9 Si 1.86797 * 119.99783 * 182.31124 * 7 5 4 10 10 H 1.48498 * 109.47402 * 90.00168 * 9 7 5 11 11 H 1.48502 * 109.46773 * 209.99921 * 9 7 5 12 12 H 1.48504 * 109.47211 * 329.99694 * 9 7 5 13 13 C 1.34781 * 119.99639 * 84.70670 * 4 3 2 14 14 O 1.21650 * 119.99624 * 174.79582 * 13 4 3 15 15 C 1.47293 * 119.99965 * 354.52629 * 13 4 3 16 16 C 1.36991 * 126.95832 * 184.30705 * 15 13 4 17 17 C 1.41162 * 103.84126 * 179.87201 * 16 15 13 18 18 C 1.50705 * 126.69293 * 180.10069 * 17 16 15 19 19 N 1.30170 * 106.61491 * 0.39488 * 17 16 15 20 20 O 1.20880 * 112.01072 * 359.74234 * 19 17 16 21 21 H 1.08998 * 109.47561 * 179.97438 * 1 2 3 22 22 H 1.09001 * 109.47112 * 300.00148 * 1 2 3 23 23 H 1.09008 * 109.46972 * 59.99740 * 1 2 3 24 24 H 1.08997 * 109.47145 * 240.00336 * 2 1 3 25 25 H 1.09001 * 109.47295 * 120.00508 * 2 1 3 26 26 H 1.09005 * 109.46540 * 60.00213 * 3 2 1 27 27 H 1.09001 * 109.47396 * 300.00446 * 3 2 1 28 28 H 0.97011 * 119.99392 * 180.02562 * 8 7 5 29 29 H 1.08009 * 128.07872 * 359.97438 * 16 15 13 30 30 H 1.09009 * 109.47209 * 270.32326 * 18 17 16 31 31 H 1.08994 * 109.47466 * 30.32299 * 18 17 16 32 32 H 1.08998 * 109.47184 * 150.32768 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5050 1.4425 0.0006 5 6 4.1879 1.5518 1.1795 6 1 5.0412 0.9176 1.3701 7 6 3.7840 2.4803 2.1342 8 7 2.7200 3.2195 1.9218 9 14 4.7557 2.6747 3.7176 10 1 5.8120 3.7009 3.5274 11 1 3.8431 3.1001 4.8092 12 1 5.3842 1.3776 4.0752 13 6 4.1793 1.3346 -1.1614 14 8 5.3921 1.4296 -1.1719 15 6 3.4483 1.0959 -2.4176 16 6 3.9897 0.8825 -3.6578 17 6 2.8644 0.7095 -4.4923 18 6 2.8758 0.4397 -5.9750 19 7 1.8149 0.8347 -3.7326 20 8 2.1123 1.0489 -2.5807 21 1 -0.3634 -1.0276 -0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 1.8933 -0.5138 -0.8900 25 1 1.8933 -0.5139 0.8899 26 1 1.6766 1.9563 0.8901 27 1 1.6766 1.9564 -0.8899 28 1 2.4387 3.8670 2.5871 29 1 5.0338 0.8520 -3.9326 30 1 2.8655 1.3857 -6.5166 31 1 3.7749 -0.1184 -6.2359 32 1 1.9952 -0.1431 -6.2450 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000044372603.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:02:44 Heat of formation + Delta-G solvation = 24.282808 kcal Electronic energy + Delta-G solvation = -17420.142024 eV Core-core repulsion = 14577.452131 eV Total energy + Delta-G solvation = -2842.689893 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -44.38781 -38.55023 -35.53862 -34.31098 -32.87338 -31.50335 -31.00583 -28.42024 -26.08586 -25.00399 -22.82120 -21.98113 -20.81458 -19.30301 -17.35334 -17.17931 -16.55779 -15.62013 -15.07117 -14.34648 -13.88235 -13.74118 -13.48382 -13.22013 -13.14228 -12.75805 -12.53818 -12.39343 -11.64303 -11.47669 -11.27068 -11.00542 -10.93089 -10.69078 -10.38199 -10.33485 -9.91997 -9.61124 -9.07596 -8.97974 -8.92413 -7.61056 -6.41229 -4.21940 1.53850 2.50754 3.14526 3.20756 3.23528 3.49671 4.03462 4.09277 4.46122 4.58941 4.95356 5.04998 5.49560 5.54107 5.57480 5.70725 5.77539 5.84345 5.95500 5.99520 6.13314 6.41402 6.42999 6.52135 6.60444 6.73539 7.01360 7.29480 7.54655 8.11190 8.31362 8.65137 8.94762 9.15197 9.74754 10.55128 Molecular weight = 238.11amu Principal moments of inertia in cm(-1) A = 0.032074 B = 0.008090 C = 0.006854 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 872.763029 B = 3460.145239 C = 4084.111953 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.133 4.133 3 C 0.084 3.916 4 N -0.410 5.410 5 C -0.305 4.305 6 H 0.094 0.906 7 C 0.043 3.957 8 N -0.867 5.867 9 Si 0.931 3.069 10 H -0.274 1.274 11 H -0.281 1.281 12 H -0.267 1.267 13 C 0.520 3.480 14 O -0.559 6.559 15 C -0.034 4.034 16 C -0.197 4.197 17 C 0.003 3.997 18 C -0.069 4.069 19 N -0.374 5.374 20 O 0.115 5.885 21 H 0.044 0.956 22 H 0.054 0.946 23 H 0.052 0.948 24 H 0.044 0.956 25 H 0.061 0.939 26 H 0.136 0.864 27 H 0.056 0.944 28 H 0.274 0.726 29 H 0.173 0.827 30 H 0.076 0.924 31 H 0.079 0.921 32 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.293 -4.026 -6.728 8.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.171 4.171 3 C -0.039 4.039 4 N -0.127 5.127 5 C -0.433 4.433 6 H 0.112 0.888 7 C -0.163 4.163 8 N -0.504 5.504 9 Si 0.757 3.243 10 H -0.199 1.199 11 H -0.207 1.207 12 H -0.192 1.192 13 C 0.306 3.694 14 O -0.442 6.442 15 C -0.101 4.101 16 C -0.221 4.221 17 C -0.154 4.154 18 C -0.127 4.127 19 N -0.079 5.079 20 O 0.048 5.952 21 H 0.063 0.937 22 H 0.073 0.927 23 H 0.071 0.929 24 H 0.063 0.937 25 H 0.080 0.920 26 H 0.153 0.847 27 H 0.075 0.925 28 H 0.084 0.916 29 H 0.191 0.809 30 H 0.095 0.905 31 H 0.097 0.903 32 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -4.127 -3.879 -6.808 8.856 hybrid contribution 1.142 0.159 0.553 1.279 sum -2.985 -3.720 -6.256 7.866 Atomic orbital electron populations 1.21629 0.96099 1.00523 1.01690 1.21890 0.95325 0.98876 1.01056 1.22246 0.80973 0.95194 1.05465 1.43410 1.05569 1.59462 1.04225 1.19490 1.13416 1.18858 0.91531 0.88846 1.25638 0.96127 0.94136 1.00365 1.69526 1.22691 1.22149 1.36071 0.85856 0.79350 0.79211 0.79871 1.19936 1.20686 1.19156 1.16974 0.86651 0.85045 0.80750 1.90694 1.12349 1.56629 1.84566 1.25107 0.82953 1.03212 0.98811 1.22653 1.01092 1.07443 0.90899 1.23460 0.88983 1.04062 0.98930 1.20097 1.03369 1.02486 0.86744 1.73637 1.24893 1.18175 0.91236 1.85216 1.23132 1.65286 1.21591 0.93680 0.92726 0.92863 0.93696 0.92024 0.84712 0.92547 0.91554 0.80950 0.90487 0.90252 0.90843 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.30 9.91 37.16 0.37 -1.94 16 2 C -0.13 -2.59 5.71 -26.73 -0.15 -2.75 16 3 C 0.08 1.91 4.49 -4.04 -0.02 1.89 16 4 N -0.41 -10.51 2.53 -116.09 -0.29 -10.80 16 5 C -0.30 -8.19 8.83 -15.05 -0.13 -8.32 16 6 H 0.09 2.55 7.83 -52.48 -0.41 2.14 16 7 C 0.04 1.09 5.36 -17.44 -0.09 1.00 16 8 N -0.87 -22.40 10.73 55.51 0.60 -21.81 16 9 Si 0.93 19.99 29.55 -169.99 -5.02 14.97 16 10 H -0.27 -5.97 7.11 56.52 0.40 -5.56 16 11 H -0.28 -5.86 7.11 56.52 0.40 -5.46 16 12 H -0.27 -5.64 7.11 56.52 0.40 -5.23 16 13 C 0.52 13.19 7.57 -12.58 -0.10 13.10 16 14 O -0.56 -15.60 16.89 5.23 0.09 -15.51 16 15 C -0.03 -0.74 6.51 -36.35 -0.24 -0.98 16 16 C -0.20 -3.65 10.92 -38.92 -0.42 -4.08 16 17 C 0.00 0.06 7.31 -82.18 -0.60 -0.54 16 18 C -0.07 -0.79 10.47 36.01 0.38 -0.41 16 19 N -0.37 -7.06 12.04 33.52 0.40 -6.65 16 20 O 0.12 2.35 6.64 15.46 0.10 2.45 16 21 H 0.04 0.64 8.14 -51.93 -0.42 0.22 16 22 H 0.05 0.86 8.14 -51.93 -0.42 0.44 16 23 H 0.05 0.85 8.14 -51.92 -0.42 0.43 16 24 H 0.04 0.89 6.62 -51.93 -0.34 0.54 16 25 H 0.06 1.23 8.14 -51.93 -0.42 0.81 16 26 H 0.14 3.29 5.18 -51.93 -0.27 3.02 16 27 H 0.06 1.26 5.71 -51.93 -0.30 0.96 16 28 H 0.27 6.62 8.31 -40.82 -0.34 6.28 16 29 H 0.17 2.86 8.06 -52.48 -0.42 2.43 16 30 H 0.08 0.77 8.14 -51.92 -0.42 0.35 16 31 H 0.08 0.74 8.14 -51.93 -0.42 0.32 16 32 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 LS Contribution 275.49 15.07 4.15 4.15 Total: -1.00 -29.37 275.49 -4.82 -34.19 By element: Atomic # 1 Polarization: 5.88 SS G_CDS: -3.84 Total: 2.04 kcal Atomic # 6 Polarization: -2.02 SS G_CDS: -1.01 Total: -3.03 kcal Atomic # 7 Polarization: -39.97 SS G_CDS: 0.70 Total: -39.26 kcal Atomic # 8 Polarization: -13.25 SS G_CDS: 0.19 Total: -13.06 kcal Atomic # 14 Polarization: 19.99 SS G_CDS: -5.02 Total: 14.97 kcal Total LS contribution 4.15 Total: 4.15 kcal Total: -29.37 -4.82 -34.19 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000044372603.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.471 kcal (2) G-P(sol) polarization free energy of solvation -29.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.106 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.823 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.188 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.283 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds