Wall clock time and date at job start Sun Mar 29 2020 22:17:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.41255 * 126.71091 * 2 1 4 4 C 1.36822 * 103.84948 * 180.02562 * 3 2 1 5 5 C 1.47511 * 126.94395 * 179.97438 * 4 3 2 6 6 O 1.21579 * 120.00299 * 4.65414 * 5 4 3 7 7 N 1.34780 * 120.00052 * 184.65923 * 5 4 3 8 8 C 1.46503 * 119.99793 * 4.12956 * 7 5 4 9 9 C 1.46502 * 120.00328 * 184.13894 * 7 5 4 10 10 H 1.09003 * 109.46572 * 359.97438 * 9 7 5 11 11 C 1.52994 * 109.47382 * 119.99481 * 9 7 5 12 12 C 1.50700 * 109.46881 * 239.99857 * 9 7 5 13 13 H 1.08003 * 119.99838 * 359.97438 * 12 9 7 14 14 C 1.37876 * 119.99960 * 179.97438 * 12 9 7 15 15 N 1.31512 * 119.99773 * 359.97438 * 14 12 9 16 16 Si 1.86801 * 119.99764 * 179.97438 * 14 12 9 17 17 H 1.48500 * 109.46995 * 89.99904 * 16 14 12 18 18 H 1.48504 * 109.46903 * 209.99587 * 16 14 12 19 19 H 1.48495 * 109.47345 * 329.99506 * 16 14 12 20 20 O 1.34643 * 106.11414 * 0.23639 * 4 3 2 21 21 N 1.20896 * 111.46101 * 359.56795 * 20 4 3 22 22 H 1.08991 * 109.47036 * 89.99503 * 1 2 3 23 23 H 1.08996 * 109.47173 * 210.00119 * 1 2 3 24 24 H 1.09011 * 109.46219 * 330.00057 * 1 2 3 25 25 H 1.07998 * 128.07393 * 0.03251 * 3 2 1 26 26 H 1.08996 * 109.47141 * 84.24234 * 8 7 5 27 27 H 1.09000 * 109.47109 * 324.24200 * 8 7 5 28 28 H 1.09001 * 109.47307 * 204.24134 * 8 7 5 29 29 H 1.09000 * 109.47176 * 299.99738 * 11 9 7 30 30 H 1.08997 * 109.47042 * 60.00256 * 11 9 7 31 31 H 1.09004 * 109.46816 * 180.02562 * 11 9 7 32 32 H 0.97005 * 119.99287 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3514 1.1324 0.0000 4 6 3.6121 0.6008 -0.0006 5 6 4.8871 1.3427 -0.0014 6 8 4.8848 2.5555 0.0839 7 7 6.0546 0.6761 -0.0967 8 6 6.0553 -0.7760 -0.2905 9 6 7.3231 1.4036 -0.0064 10 1 7.1233 2.4657 0.1361 11 6 8.1321 0.8729 1.1787 12 6 8.1068 1.2065 -1.2783 13 1 7.7009 0.5996 -2.0742 14 6 9.3421 1.8008 -1.4260 15 7 9.8361 2.5402 -0.4571 16 14 10.3139 1.5559 -3.0024 17 1 9.9606 2.6231 -3.9726 18 1 11.7671 1.6203 -2.7032 19 1 9.9868 0.2295 -3.5846 20 8 3.4540 -0.7363 -0.0062 21 7 2.2847 -1.0434 -0.0005 22 1 -0.3633 0.0001 -1.0276 23 1 -0.3633 -0.8899 0.5138 24 1 -0.3632 0.8901 0.5139 25 1 2.0680 2.1745 0.0005 26 1 5.9468 -1.0011 -1.3514 27 1 5.2248 -1.2166 0.2611 28 1 6.9947 -1.1909 0.0747 29 1 7.5652 1.0155 2.0987 30 1 8.3318 -0.1891 1.0359 31 1 9.0757 1.4145 1.2461 32 1 10.7051 2.9586 -0.5612 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000063094722.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:17:45 Heat of formation + Delta-G solvation = 31.453640 kcal Electronic energy + Delta-G solvation = -17019.361121 eV Core-core repulsion = 14176.982179 eV Total energy + Delta-G solvation = -2842.378942 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -44.83070 -39.09118 -35.68847 -34.72155 -33.01632 -31.74362 -29.42021 -28.67671 -26.31200 -25.27927 -23.91373 -22.63453 -20.64882 -19.04705 -17.63100 -17.14879 -16.51034 -15.92213 -15.50672 -14.52300 -14.41642 -13.79458 -13.48404 -13.40681 -13.16103 -12.71824 -12.66543 -12.49231 -11.61829 -11.42609 -11.26031 -11.08776 -10.88133 -10.77859 -10.31079 -10.22072 -10.03762 -9.53096 -9.50401 -9.23663 -8.48235 -7.76876 -6.12043 -4.20282 1.08549 2.14254 2.94789 3.26153 3.32674 3.34593 3.52875 3.79121 4.11724 4.36138 4.58601 5.08677 5.12990 5.20436 5.32655 5.37311 5.55441 5.68105 5.86043 6.04981 6.09439 6.34375 6.70165 6.74691 6.95616 7.25324 7.36834 7.64483 7.91663 8.07747 8.18367 8.34395 8.63064 8.85512 9.46173 10.93483 Molecular weight = 238.11amu Principal moments of inertia in cm(-1) A = 0.044287 B = 0.005908 C = 0.005820 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 632.081312 B = 4738.401975 C = 4809.769794 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 C 0.008 3.992 3 C -0.171 4.171 4 C -0.058 4.058 5 C 0.584 3.416 6 O -0.524 6.524 7 N -0.573 5.573 8 C 0.077 3.923 9 C 0.257 3.743 10 H 0.067 0.933 11 C -0.148 4.148 12 C -0.528 4.528 13 H 0.061 0.939 14 C 0.066 3.934 15 N -0.887 5.887 16 Si 0.901 3.099 17 H -0.280 1.280 18 H -0.285 1.285 19 H -0.274 1.274 20 O 0.114 5.886 21 N -0.362 5.362 22 H 0.080 0.920 23 H 0.076 0.924 24 H 0.082 0.918 25 H 0.180 0.820 26 H 0.054 0.946 27 H 0.066 0.934 28 H 0.084 0.916 29 H 0.014 0.986 30 H 0.033 0.967 31 H 0.097 0.903 32 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.565 -5.671 1.492 13.866 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.130 4.130 2 C -0.150 4.150 3 C -0.194 4.194 4 C -0.124 4.124 5 C 0.367 3.633 6 O -0.402 6.402 7 N -0.302 5.302 8 C -0.067 4.067 9 C 0.157 3.843 10 H 0.085 0.915 11 C -0.207 4.207 12 C -0.566 4.566 13 H 0.079 0.921 14 C -0.137 4.137 15 N -0.525 5.525 16 Si 0.728 3.272 17 H -0.206 1.206 18 H -0.211 1.211 19 H -0.198 1.198 20 O 0.045 5.955 21 N -0.067 5.067 22 H 0.099 0.901 23 H 0.095 0.905 24 H 0.101 0.899 25 H 0.197 0.803 26 H 0.072 0.928 27 H 0.084 0.916 28 H 0.102 0.898 29 H 0.033 0.967 30 H 0.052 0.948 31 H 0.115 0.885 32 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -12.558 -6.233 1.589 14.109 hybrid contribution 0.516 0.607 -0.908 1.208 sum -12.042 -5.626 0.681 13.309 Atomic orbital electron populations 1.20158 0.85686 1.03777 1.03400 1.23568 0.99072 0.88622 1.03736 1.22800 0.90133 1.01508 1.04938 1.24820 0.98133 0.83392 1.06019 1.16742 0.81044 0.86249 0.79299 1.90820 1.85437 1.11939 1.52000 1.48293 1.06880 1.08348 1.66708 1.21880 1.02879 0.80661 1.01262 1.19125 0.76905 0.93280 0.94964 0.91537 1.22122 1.02834 1.00151 0.95577 1.21284 1.02505 1.32072 1.00765 0.92059 1.24882 0.97269 0.94696 0.96820 1.69874 1.18730 1.32029 1.31892 0.86455 0.78971 0.78633 0.83116 1.20566 1.21074 1.19848 1.85171 1.20576 1.22621 1.67125 1.73671 0.90030 1.24832 1.18176 0.90143 0.90543 0.89920 0.80295 0.92773 0.91558 0.89785 0.96730 0.94765 0.88471 0.92577 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.64 10.47 36.01 0.38 -0.26 16 2 C 0.01 0.11 7.31 -82.17 -0.60 -0.49 16 3 C -0.17 -2.54 10.92 -38.95 -0.43 -2.96 16 4 C -0.06 -1.00 6.94 -36.32 -0.25 -1.25 16 5 C 0.58 12.33 7.67 -12.48 -0.10 12.24 16 6 O -0.52 -12.66 16.25 5.30 0.09 -12.58 16 7 N -0.57 -12.32 2.75 -176.50 -0.49 -12.80 16 8 C 0.08 1.35 9.08 59.85 0.54 1.89 16 9 C 0.26 6.43 2.62 -69.08 -0.18 6.25 16 10 H 0.07 1.90 6.91 -51.93 -0.36 1.55 16 11 C -0.15 -3.45 8.96 37.15 0.33 -3.12 16 12 C -0.53 -14.03 8.37 -34.44 -0.29 -14.32 16 13 H 0.06 1.61 7.65 -52.48 -0.40 1.21 16 14 C 0.07 1.77 5.30 -17.82 -0.09 1.67 16 15 N -0.89 -24.57 11.32 55.43 0.63 -23.95 16 16 Si 0.90 20.77 29.54 -169.99 -5.02 15.75 16 17 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 18 H -0.29 -6.49 7.11 56.52 0.40 -6.09 16 19 H -0.27 -6.19 7.11 56.52 0.40 -5.79 16 20 O 0.11 1.86 7.89 15.54 0.12 1.98 16 21 N -0.36 -5.60 12.04 33.52 0.40 -5.20 16 22 H 0.08 0.61 8.14 -51.93 -0.42 0.19 16 23 H 0.08 0.62 8.14 -51.93 -0.42 0.19 16 24 H 0.08 0.57 8.14 -51.92 -0.42 0.15 16 25 H 0.18 2.31 8.06 -52.49 -0.42 1.89 16 26 H 0.05 0.92 8.14 -51.93 -0.42 0.50 16 27 H 0.07 1.03 5.10 -51.93 -0.26 0.77 16 28 H 0.08 1.44 6.44 -51.93 -0.33 1.11 16 29 H 0.01 0.30 8.14 -51.93 -0.42 -0.12 16 30 H 0.03 0.73 6.67 -51.93 -0.35 0.38 16 31 H 0.10 2.48 6.07 -51.93 -0.32 2.16 16 32 H 0.26 6.96 8.31 -40.82 -0.34 6.62 16 LS Contribution 274.67 15.07 4.14 4.14 Total: -1.00 -29.90 274.67 -4.50 -34.41 By element: Atomic # 1 Polarization: 2.30 SS G_CDS: -3.69 Total: -1.39 kcal Atomic # 6 Polarization: 0.32 SS G_CDS: -0.68 Total: -0.36 kcal Atomic # 7 Polarization: -42.49 SS G_CDS: 0.55 Total: -41.95 kcal Atomic # 8 Polarization: -10.80 SS G_CDS: 0.21 Total: -10.60 kcal Atomic # 14 Polarization: 20.77 SS G_CDS: -5.02 Total: 15.75 kcal Total LS contribution 4.14 Total: 4.14 kcal Total: -29.90 -4.50 -34.41 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000063094722.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.861 kcal (2) G-P(sol) polarization free energy of solvation -29.903 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.958 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.504 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.407 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.454 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds