Wall clock time and date at job start Sun Mar 29 2020 22:25:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.33698 * 126.27368 * 2 1 4 4 C 1.30616 * 108.98986 * 180.31056 * 3 2 1 5 5 O 1.33663 * 109.16112 * 359.72687 * 4 3 2 6 6 C 1.35347 * 107.67993 * 0.02562 * 5 4 3 7 7 C 1.46724 * 126.64419 * 180.02562 * 6 5 4 8 8 O 1.21680 * 120.00214 * 173.14598 * 7 6 5 9 9 N 1.34781 * 119.99745 * 353.14610 * 7 6 5 10 10 C 1.46499 * 120.00282 * 3.54353 * 9 7 6 11 11 C 1.46502 * 119.99781 * 183.54399 * 9 7 6 12 12 H 1.08998 * 109.47158 * 0.02562 * 11 9 7 13 13 C 1.53002 * 109.46834 * 119.99721 * 11 9 7 14 14 C 1.50699 * 109.47171 * 239.99615 * 11 9 7 15 15 H 1.07998 * 119.99656 * 0.02562 * 14 11 9 16 16 C 1.37876 * 120.00246 * 179.97438 * 14 11 9 17 17 N 1.31508 * 120.00185 * 180.02562 * 16 14 11 18 18 Si 1.86806 * 119.99731 * 0.02562 * 16 14 11 19 19 H 1.48496 * 109.47293 * 89.99683 * 18 16 14 20 20 H 1.48502 * 109.46863 * 210.00042 * 18 16 14 21 21 H 1.48498 * 109.46788 * 329.99716 * 18 16 14 22 22 H 1.09000 * 109.46948 * 270.15107 * 1 2 3 23 23 H 1.09003 * 109.46877 * 30.14013 * 1 2 3 24 24 H 1.08994 * 109.47383 * 150.14577 * 1 2 3 25 25 H 1.08005 * 125.42123 * 179.72839 * 4 3 2 26 26 H 1.08993 * 109.46944 * 84.00023 * 10 9 7 27 27 H 1.08997 * 109.46990 * 204.00561 * 10 9 7 28 28 H 1.09000 * 109.46737 * 324.00324 * 10 9 7 29 29 H 1.09000 * 109.46807 * 179.97438 * 13 11 9 30 30 H 1.08995 * 109.47867 * 299.99973 * 13 11 9 31 31 H 1.08998 * 109.47216 * 60.00253 * 13 11 9 32 32 H 0.97000 * 119.99990 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2980 1.0779 0.0000 4 6 3.5452 0.6898 -0.0067 5 8 3.5890 -0.6461 -0.0052 6 6 2.3136 -1.0992 0.0023 7 6 1.8826 -2.5016 0.0070 8 8 0.7044 -2.7756 0.1393 9 7 2.7916 -3.4865 -0.1353 10 6 4.2177 -3.1610 -0.2167 11 6 2.3536 -4.8826 -0.2086 12 1 1.2673 -4.9271 -0.1317 13 6 2.7949 -5.4861 -1.5436 14 6 2.9704 -5.6627 0.9237 15 1 3.6230 -5.1679 1.6277 16 6 2.7007 -7.0078 1.0614 17 7 3.2385 -7.6884 2.0498 18 14 1.5713 -7.8634 -0.1560 19 1 2.3738 -8.3938 -1.2873 20 1 0.8705 -8.9835 0.5219 21 1 0.5718 -6.8929 -0.6702 22 1 -0.3633 0.0027 1.0277 23 1 -0.3633 0.8888 -0.5160 24 1 -0.3634 -0.8912 -0.5115 25 1 4.4044 1.3442 -0.0125 26 1 4.6236 -3.0529 0.7890 27 1 4.7439 -3.9613 -0.7370 28 1 4.3464 -2.2265 -0.7628 29 1 2.4694 -6.5249 -1.5979 30 1 2.3489 -4.9219 -2.3626 31 1 3.8813 -5.4416 -1.6210 32 1 3.0491 -8.6348 2.1465 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000093232576.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:25:02 Heat of formation + Delta-G solvation = 1.736449 kcal Electronic energy + Delta-G solvation = -17286.711984 eV Core-core repulsion = 14443.044408 eV Total energy + Delta-G solvation = -2843.667576 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -43.34846 -39.14725 -36.00627 -35.00869 -32.85060 -31.55609 -30.39832 -27.68572 -26.35807 -25.19558 -23.79261 -22.14228 -20.78469 -19.17750 -17.24564 -16.95456 -16.68691 -16.22253 -15.78650 -14.79596 -14.50959 -14.13389 -13.36066 -13.22126 -13.05520 -12.90509 -12.47657 -12.30175 -12.06346 -11.89316 -11.60257 -11.25217 -11.00156 -10.78023 -10.64345 -10.21175 -9.77133 -9.53733 -9.35613 -8.84465 -8.69253 -7.87300 -6.19736 -4.21535 1.01970 2.51402 2.63188 3.19273 3.33286 3.34648 3.49043 3.64730 4.09153 4.29910 4.84242 4.87410 5.12824 5.41718 5.58966 5.71875 5.77331 5.92242 5.92832 6.07735 6.12888 6.20631 6.29963 6.38582 6.42475 6.74842 6.97513 7.16307 7.52485 7.59347 7.99458 8.34552 8.59444 8.81652 9.39817 10.92889 Molecular weight = 238.11amu Principal moments of inertia in cm(-1) A = 0.039840 B = 0.007074 C = 0.006599 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 702.637239 B = 3957.284629 C = 4241.808808 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 C 0.061 3.939 3 N -0.495 5.495 4 C 0.179 3.821 5 O -0.183 6.183 6 C -0.091 4.091 7 C 0.592 3.408 8 O -0.525 6.525 9 N -0.572 5.572 10 C 0.083 3.917 11 C 0.230 3.770 12 H 0.066 0.934 13 C -0.163 4.163 14 C -0.531 4.531 15 H 0.079 0.921 16 C 0.077 3.923 17 N -0.893 5.893 18 Si 0.883 3.117 19 H -0.276 1.276 20 H -0.293 1.293 21 H -0.262 1.262 22 H 0.080 0.920 23 H 0.072 0.928 24 H 0.093 0.907 25 H 0.251 0.749 26 H 0.055 0.945 27 H 0.081 0.919 28 H 0.065 0.935 29 H 0.053 0.947 30 H 0.035 0.965 31 H 0.057 0.943 32 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.338 13.175 -6.503 14.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.063 4.063 3 N -0.224 5.224 4 C -0.046 4.046 5 O -0.068 6.068 6 C -0.147 4.147 7 C 0.377 3.623 8 O -0.404 6.404 9 N -0.301 5.301 10 C -0.060 4.060 11 C 0.129 3.871 12 H 0.084 0.916 13 C -0.221 4.221 14 C -0.569 4.569 15 H 0.097 0.903 16 C -0.126 4.126 17 N -0.530 5.530 18 Si 0.713 3.287 19 H -0.203 1.203 20 H -0.220 1.220 21 H -0.187 1.187 22 H 0.099 0.901 23 H 0.091 0.909 24 H 0.111 0.889 25 H 0.267 0.733 26 H 0.074 0.926 27 H 0.099 0.901 28 H 0.083 0.917 29 H 0.072 0.928 30 H 0.054 0.946 31 H 0.076 0.924 32 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 0.632 13.379 -6.338 14.818 hybrid contribution 0.152 -1.102 -0.475 1.209 sum 0.784 12.277 -6.813 14.063 Atomic orbital electron populations 1.20309 0.85524 1.03833 1.03620 1.21986 0.98303 0.86419 0.99566 1.70288 1.01396 1.31666 1.19074 1.28255 0.97482 0.80407 0.98478 1.84765 1.29753 1.23587 1.68733 1.23367 0.80976 0.96810 1.13512 1.16486 0.85936 0.81177 0.78656 1.90811 1.16332 1.81406 1.51853 1.47850 1.06378 1.07651 1.68237 1.21810 0.81582 1.00628 1.01978 1.19414 0.97859 0.75962 0.93902 0.91634 1.22483 1.01588 1.00016 0.97977 1.21119 1.30643 0.93972 1.11141 0.90255 1.24859 0.95299 0.97072 0.95405 1.69866 1.43645 1.08844 1.30615 0.86920 0.81530 0.79502 0.80794 1.20316 1.21982 1.18725 0.90150 0.90941 0.88871 0.73303 0.92589 0.90085 0.91706 0.92835 0.94625 0.92357 0.92320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -1.06 9.80 36.01 0.35 -0.71 16 2 C 0.06 0.97 7.16 -82.46 -0.59 0.38 16 3 N -0.49 -7.07 11.26 -10.88 -0.12 -7.19 16 4 C 0.18 2.02 13.21 52.25 0.69 2.71 16 5 O -0.18 -2.60 7.50 4.42 0.03 -2.56 16 6 C -0.09 -1.57 6.79 -36.84 -0.25 -1.82 16 7 C 0.59 12.20 7.64 -12.83 -0.10 12.10 16 8 O -0.52 -12.00 14.23 5.21 0.07 -11.92 16 9 N -0.57 -11.98 2.75 -176.79 -0.49 -12.46 16 10 C 0.08 1.42 8.86 59.85 0.53 1.95 16 11 C 0.23 5.48 2.22 -69.08 -0.15 5.32 16 12 H 0.07 1.71 5.96 -51.93 -0.31 1.40 16 13 C -0.16 -3.42 8.66 37.16 0.32 -3.10 16 14 C -0.53 -14.56 8.95 -34.44 -0.31 -14.87 16 15 H 0.08 2.36 7.89 -52.49 -0.41 1.94 16 16 C 0.08 2.17 5.45 -17.82 -0.10 2.07 16 17 N -0.89 -26.62 13.96 55.43 0.77 -25.85 16 18 Si 0.88 21.41 24.37 -169.99 -4.14 17.26 16 19 H -0.28 -6.39 6.87 56.52 0.39 -6.00 16 20 H -0.29 -7.12 7.11 56.52 0.40 -6.72 16 21 H -0.26 -6.24 6.53 56.52 0.37 -5.87 16 22 H 0.08 1.07 8.14 -51.93 -0.42 0.65 16 23 H 0.07 0.85 8.14 -51.93 -0.42 0.43 16 24 H 0.09 1.41 6.64 -51.93 -0.34 1.07 16 25 H 0.25 1.32 8.06 -52.48 -0.42 0.90 16 26 H 0.06 0.97 8.14 -51.93 -0.42 0.55 16 27 H 0.08 1.35 6.44 -51.93 -0.33 1.01 16 28 H 0.06 0.95 5.41 -51.93 -0.28 0.66 16 29 H 0.05 1.17 3.27 -51.93 -0.17 1.00 16 30 H 0.03 0.66 8.14 -51.93 -0.42 0.24 16 31 H 0.06 1.13 6.67 -51.93 -0.35 0.79 16 32 H 0.27 7.46 8.31 -40.82 -0.34 7.12 16 LS Contribution 264.53 15.07 3.99 3.99 Total: -1.00 -32.55 264.53 -2.98 -35.53 By element: Atomic # 1 Polarization: 2.67 SS G_CDS: -3.50 Total: -0.83 kcal Atomic # 6 Polarization: 3.63 SS G_CDS: 0.40 Total: 4.03 kcal Atomic # 7 Polarization: -45.67 SS G_CDS: 0.16 Total: -45.50 kcal Atomic # 8 Polarization: -14.59 SS G_CDS: 0.11 Total: -14.49 kcal Atomic # 14 Polarization: 21.41 SS G_CDS: -4.14 Total: 17.26 kcal Total LS contribution 3.99 Total: 3.99 kcal Total: -32.55 -2.98 -35.53 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000093232576.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 37.270 kcal (2) G-P(sol) polarization free energy of solvation -32.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.719 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.982 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.534 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.736 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds