Wall clock time and date at job start Sun Mar 29 2020 22:57:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53005 * 109.47140 * 2 1 4 4 H 1.09001 * 109.46812 * 54.99771 * 3 2 1 5 5 C 1.50703 * 109.47304 * 175.00079 * 3 2 1 6 6 H 1.07994 * 119.99399 * 120.00023 * 5 3 2 7 7 C 1.37874 * 119.99789 * 299.99650 * 5 3 2 8 8 N 1.31518 * 120.00144 * 0.02562 * 7 5 3 9 9 Si 1.86803 * 119.99733 * 179.97438 * 7 5 3 10 10 H 1.48497 * 109.46762 * 60.00562 * 9 7 5 11 11 H 1.48506 * 109.46725 * 180.02562 * 9 7 5 12 12 H 1.48494 * 109.47116 * 300.00217 * 9 7 5 13 13 N 1.46506 * 109.46831 * 295.00216 * 3 2 1 14 14 C 1.34774 * 120.00251 * 84.99772 * 13 3 2 15 15 O 1.21610 * 119.99789 * 0.02562 * 14 13 3 16 16 C 1.47396 * 120.00073 * 179.97438 * 14 13 3 17 17 C 1.37364 * 128.56473 * 359.68198 * 16 14 13 18 18 O 1.33487 * 106.33988 * 179.85514 * 17 16 14 19 19 N 1.20661 * 113.15789 * 0.44832 * 18 17 16 20 20 C 1.30007 * 112.30047 * 359.72089 * 19 18 17 21 21 C 1.50709 * 127.33404 * 179.97438 * 20 19 18 22 22 H 1.09000 * 109.46863 * 60.00110 * 1 2 3 23 23 H 1.08996 * 109.46657 * 180.02562 * 1 2 3 24 24 H 1.08998 * 109.46677 * 299.99780 * 1 2 3 25 25 H 1.08994 * 109.47359 * 240.00028 * 2 1 3 26 26 H 1.09000 * 109.47312 * 119.99601 * 2 1 3 27 27 H 0.96997 * 119.99752 * 179.97438 * 8 7 5 28 28 H 0.97006 * 119.99584 * 264.99701 * 13 3 2 29 29 H 1.07998 * 126.82677 * 359.97438 * 17 16 14 30 30 H 1.08994 * 109.46667 * 270.03714 * 21 20 19 31 31 H 1.08997 * 109.46846 * 30.03549 * 21 20 19 32 32 H 1.08997 * 109.46798 * 150.03915 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 0.8418 5 6 3.5420 1.4444 0.1238 6 1 4.1471 1.8890 -0.6523 7 6 4.1433 0.8786 1.2280 8 7 3.4062 0.3368 2.1729 9 14 6.0051 0.8802 1.3811 10 1 6.5004 2.2801 1.3808 11 1 6.3979 0.2159 2.6498 12 1 6.5967 0.1454 0.2343 13 7 1.6524 2.0975 -1.2519 14 6 0.4351 2.6644 -1.3670 15 8 -0.3414 2.6326 -0.4316 16 6 0.0453 3.3238 -2.6263 17 6 0.7773 3.4678 -3.7797 18 8 -0.0012 4.1302 -4.6383 19 7 -1.0805 4.4134 -4.1790 20 6 -1.2211 3.9956 -2.9559 21 6 -2.4251 4.1642 -2.0653 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3632 -1.0277 0.0005 24 1 -0.3632 0.5138 0.8900 25 1 1.8934 -0.5138 -0.8899 26 1 1.8934 -0.5138 0.8900 27 1 3.8294 -0.0616 2.9495 28 1 2.2719 2.1232 -1.9978 29 1 1.7820 3.1137 -3.9573 30 1 -2.3342 5.0939 -1.5037 31 1 -3.3273 4.1955 -2.6761 32 1 -2.4845 3.3252 -1.3720 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259788851.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:57:33 Heat of formation + Delta-G solvation = 11.845370 kcal Electronic energy + Delta-G solvation = -17004.502658 eV Core-core repulsion = 14161.273437 eV Total energy + Delta-G solvation = -2843.229220 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -44.76556 -38.98118 -35.23743 -34.20603 -32.76846 -31.85717 -30.68116 -28.60811 -27.08013 -24.43953 -22.90199 -21.12458 -20.51537 -19.39961 -18.15539 -17.60131 -16.70362 -15.63975 -15.44836 -14.73637 -14.51187 -13.98653 -13.20151 -13.17681 -13.00647 -12.71640 -12.38845 -12.10425 -11.59360 -11.32624 -11.18440 -11.04157 -10.87605 -10.39058 -10.24636 -9.79931 -9.71108 -9.52096 -9.28775 -9.11927 -8.55935 -7.93996 -6.17901 -4.28050 1.27905 1.93836 3.10664 3.21974 3.27942 3.28555 3.80276 3.91161 4.21415 4.32711 4.48312 5.05073 5.13658 5.39601 5.50043 5.64667 5.76852 5.82001 6.28569 6.34531 6.40932 6.60558 6.98679 7.13533 7.27700 7.34110 7.55045 7.65379 7.82724 8.11186 8.28624 8.54193 8.69566 8.98709 9.39263 10.87404 Molecular weight = 238.11amu Principal moments of inertia in cm(-1) A = 0.034933 B = 0.006421 C = 0.005767 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 801.337855 B = 4359.622663 C = 4854.434881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.128 4.128 3 C 0.272 3.728 4 H 0.052 0.948 5 C -0.537 4.537 6 H 0.061 0.939 7 C 0.068 3.932 8 N -0.881 5.881 9 Si 0.902 3.098 10 H -0.276 1.276 11 H -0.285 1.285 12 H -0.276 1.276 13 N -0.699 5.699 14 C 0.577 3.423 15 O -0.536 6.536 16 C -0.239 4.239 17 C -0.019 4.019 18 O 0.090 5.910 19 N -0.368 5.368 20 C 0.064 3.936 21 C -0.075 4.075 22 H 0.037 0.963 23 H 0.023 0.977 24 H 0.050 0.950 25 H 0.032 0.968 26 H 0.101 0.899 27 H 0.266 0.734 28 H 0.386 0.614 29 H 0.225 0.775 30 H 0.082 0.918 31 H 0.072 0.928 32 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.248 3.791 -9.441 11.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.167 4.167 3 C 0.170 3.830 4 H 0.070 0.930 5 C -0.576 4.576 6 H 0.079 0.921 7 C -0.136 4.136 8 N -0.518 5.518 9 Si 0.729 3.271 10 H -0.202 1.202 11 H -0.211 1.211 12 H -0.201 1.201 13 N -0.346 5.346 14 C 0.362 3.638 15 O -0.415 6.415 16 C -0.246 4.246 17 C -0.101 4.101 18 O 0.031 5.969 19 N -0.077 5.077 20 C -0.098 4.098 21 C -0.133 4.133 22 H 0.057 0.943 23 H 0.042 0.958 24 H 0.070 0.930 25 H 0.050 0.950 26 H 0.119 0.881 27 H 0.076 0.924 28 H 0.219 0.781 29 H 0.241 0.759 30 H 0.100 0.900 31 H 0.091 0.909 32 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -5.528 4.306 -9.402 11.726 hybrid contribution 1.812 -0.475 0.337 1.904 sum -3.715 3.831 -9.066 10.520 Atomic orbital electron populations 1.21850 0.98314 0.98176 1.01232 1.21949 0.92656 0.99663 1.02424 1.18852 0.94333 0.89212 0.80556 0.93019 1.21165 0.90539 1.39417 1.06454 0.92086 1.24876 0.98669 0.94697 0.95322 1.69878 1.35308 1.37311 1.09340 0.86504 0.84721 0.78343 0.77521 1.20162 1.21085 1.20131 1.46401 1.13846 1.55576 1.18784 1.16847 0.83100 0.78933 0.84939 1.90756 1.51427 1.60057 1.39229 1.22824 0.95528 1.08466 0.97823 1.26412 0.98715 0.95998 0.89004 1.84514 1.18702 1.55289 1.38442 1.73616 1.00553 1.20887 1.12617 1.24877 0.97026 0.96342 0.91571 1.20244 0.91158 1.04627 0.97239 0.94346 0.95754 0.93040 0.94955 0.88136 0.92407 0.78125 0.75866 0.89966 0.90881 0.88386 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.99 8.51 37.16 0.32 -2.68 16 2 C -0.13 -3.00 5.45 -26.73 -0.15 -3.15 16 3 C 0.27 6.54 2.24 -69.08 -0.15 6.38 16 4 H 0.05 1.45 7.58 -51.93 -0.39 1.05 16 5 C -0.54 -13.59 8.73 -34.44 -0.30 -13.90 16 6 H 0.06 1.46 7.74 -52.49 -0.41 1.05 16 7 C 0.07 1.76 5.29 -17.82 -0.09 1.67 16 8 N -0.88 -23.99 11.29 55.43 0.63 -23.37 16 9 Si 0.90 19.97 29.54 -169.99 -5.02 14.95 16 10 H -0.28 -6.09 7.11 56.52 0.40 -5.69 16 11 H -0.29 -6.34 7.11 56.52 0.40 -5.94 16 12 H -0.28 -5.99 7.11 56.52 0.40 -5.59 16 13 N -0.70 -13.67 5.02 -56.01 -0.28 -13.95 16 14 C 0.58 11.15 6.38 -12.53 -0.08 11.07 16 15 O -0.54 -11.93 12.83 5.27 0.07 -11.86 16 16 C -0.24 -3.79 6.47 -102.89 -0.67 -4.45 16 17 C -0.02 -0.23 11.85 30.41 0.36 0.13 16 18 O 0.09 1.19 11.06 18.66 0.21 1.40 16 19 N -0.37 -5.53 12.01 34.78 0.42 -5.11 16 20 C 0.06 0.99 7.58 -79.77 -0.60 0.39 16 21 C -0.08 -1.00 10.15 36.01 0.37 -0.64 16 22 H 0.04 0.81 5.64 -51.93 -0.29 0.52 16 23 H 0.02 0.47 8.14 -51.93 -0.42 0.04 16 24 H 0.05 1.18 7.84 -51.93 -0.41 0.77 16 25 H 0.03 0.72 8.14 -51.93 -0.42 0.30 16 26 H 0.10 2.62 5.95 -51.93 -0.31 2.31 16 27 H 0.27 6.91 8.31 -40.82 -0.34 6.57 16 28 H 0.39 6.31 7.72 -40.82 -0.32 6.00 16 29 H 0.23 1.72 7.68 -52.49 -0.40 1.32 16 30 H 0.08 1.02 8.14 -51.93 -0.42 0.59 16 31 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 32 H 0.10 1.43 7.11 -51.93 -0.37 1.06 16 LS Contribution 273.87 15.07 4.13 4.13 Total: -1.00 -29.64 273.87 -4.58 -34.22 By element: Atomic # 1 Polarization: 8.49 SS G_CDS: -3.72 Total: 4.77 kcal Atomic # 6 Polarization: -4.17 SS G_CDS: -1.00 Total: -5.17 kcal Atomic # 7 Polarization: -43.19 SS G_CDS: 0.76 Total: -42.43 kcal Atomic # 8 Polarization: -10.74 SS G_CDS: 0.27 Total: -10.46 kcal Atomic # 14 Polarization: 19.97 SS G_CDS: -5.02 Total: 14.95 kcal Total LS contribution 4.13 Total: 4.13 kcal Total: -29.64 -4.58 -34.22 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259788851.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 46.064 kcal (2) G-P(sol) polarization free energy of solvation -29.635 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.428 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.218 kcal (6) G-S(sol) free energy of system = (1) + (5) 11.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds