Wall clock time and date at job start Sun Mar 29 2020 21:53:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46497 * 109.47337 * 67.20750 * 3 2 1 5 5 C 1.37096 * 119.99826 * 263.73451 * 4 3 2 6 6 H 1.08000 * 120.00118 * 194.17816 * 5 4 3 7 7 C 1.38949 * 120.00109 * 14.17964 * 5 4 3 8 8 N 1.31411 * 119.99921 * 11.52298 * 7 5 4 9 9 Si 1.86801 * 120.00348 * 191.52039 * 7 5 4 10 10 H 1.48500 * 109.46949 * 89.99905 * 9 7 5 11 11 H 1.48494 * 109.47258 * 210.00224 * 9 7 5 12 12 H 1.48501 * 109.47119 * 330.00334 * 9 7 5 13 13 C 1.34777 * 120.00266 * 83.73695 * 4 3 2 14 14 O 1.21294 * 119.99819 * 3.68664 * 13 4 3 15 15 C 1.50699 * 120.00349 * 183.68036 * 13 4 3 16 16 H 1.09000 * 109.57309 * 307.17158 * 15 13 4 17 17 C 1.53168 * 109.52402 * 187.00803 * 15 13 4 18 18 C 1.53183 * 109.03666 * 183.11606 * 17 15 13 19 19 C 1.53094 * 109.16265 * 56.97798 * 18 17 15 20 20 O 1.42898 * 109.41725 * 302.39647 * 19 18 17 21 21 C 1.42908 * 114.09980 * 61.15304 * 20 19 18 22 22 H 1.08999 * 109.47053 * 307.20215 * 3 2 1 23 23 H 1.09006 * 109.46889 * 187.20823 * 3 2 1 24 24 H 0.97004 * 120.00299 * 179.97438 * 8 7 5 25 25 H 1.08996 * 109.54629 * 63.25115 * 17 15 13 26 26 H 1.09005 * 109.54504 * 302.97882 * 17 15 13 27 27 H 1.09000 * 109.51847 * 297.07754 * 18 17 15 28 28 H 1.08998 * 109.52213 * 176.88692 * 18 17 15 29 29 H 1.08993 * 109.47887 * 182.40630 * 19 18 17 30 30 H 1.08998 * 109.47867 * 62.37787 * 19 18 17 31 31 H 1.09003 * 109.47568 * 58.83057 * 21 20 19 32 32 H 1.09000 * 109.47885 * 178.85758 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0966 -0.5342 -1.2733 5 6 3.4479 -1.8557 -1.3721 6 1 4.0160 -2.2013 -2.2230 7 6 3.0729 -2.7504 -0.3773 8 7 2.1987 -2.3900 0.5351 9 14 3.8115 -4.4658 -0.3370 10 1 5.0476 -4.4532 0.4859 11 1 2.8325 -5.4125 0.2547 12 1 4.1418 -4.8951 -1.7197 13 6 3.2009 0.2729 -2.3477 14 8 2.9542 1.4559 -2.2437 15 6 3.6241 -0.2944 -3.6781 16 1 4.5550 -0.8488 -3.5592 17 6 3.8321 0.8467 -4.6784 18 6 4.1856 0.2542 -6.0460 19 6 3.0740 -0.7044 -6.4809 20 8 2.9115 -1.7232 -5.4922 21 6 2.5341 -1.2318 -4.2045 22 1 2.9716 -0.6205 0.8185 23 1 2.9709 1.0204 0.1290 24 1 1.9366 -3.0147 1.2294 25 1 4.6454 1.4870 -4.3372 26 1 2.9157 1.4314 -4.7603 27 1 5.1279 -0.2891 -5.9749 28 1 4.2812 1.0569 -6.7771 29 1 3.3406 -1.1616 -7.4337 30 1 2.1406 -0.1525 -6.5910 31 1 1.5935 -0.6868 -4.2847 32 1 2.4117 -2.0691 -3.5174 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000263910884.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:53:50 Heat of formation + Delta-G solvation = -51.593926 kcal Electronic energy + Delta-G solvation = -17529.939873 eV Core-core repulsion = 14683.959718 eV Total energy + Delta-G solvation = -2845.980155 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -39.68096 -38.01975 -35.68707 -34.51661 -33.09742 -31.76529 -30.97221 -27.58613 -25.10459 -24.49990 -23.37680 -20.39042 -19.21688 -17.86307 -16.59593 -16.24160 -15.65435 -15.51591 -14.63380 -14.49671 -14.42035 -13.81019 -13.20396 -12.96624 -12.58759 -12.54239 -12.19373 -11.87061 -11.53318 -11.34419 -11.25574 -11.09927 -10.89325 -10.58189 -10.53334 -10.38517 -10.26614 -9.95530 -9.38727 -9.19290 -8.62301 -8.18510 -6.55949 -4.17367 3.02149 3.14419 3.17063 3.50511 3.76184 4.02581 4.16744 4.23036 4.74621 4.84988 5.12092 5.16491 5.28008 5.40822 5.56096 5.58660 5.74852 5.85541 6.06625 6.07663 6.18206 6.22510 6.38632 6.50115 6.66200 6.69846 6.84176 7.21448 7.41975 7.53875 8.13039 8.83298 8.86751 9.19004 9.58868 10.43553 Molecular weight = 238.11amu Principal moments of inertia in cm(-1) A = 0.021339 B = 0.010291 C = 0.007942 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1311.854307 B = 2720.136921 C = 3524.562310 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.490 5.490 2 C 0.259 3.741 3 C 0.220 3.780 4 N -0.441 5.441 5 C -0.336 4.336 6 H 0.110 0.890 7 C 0.036 3.964 8 N -0.876 5.876 9 Si 0.929 3.071 10 H -0.275 1.275 11 H -0.283 1.283 12 H -0.267 1.267 13 C 0.468 3.532 14 O -0.596 6.596 15 C -0.120 4.120 16 H 0.096 0.904 17 C -0.101 4.101 18 C -0.155 4.155 19 C 0.057 3.943 20 O -0.382 6.382 21 C 0.071 3.929 22 H 0.147 0.853 23 H 0.082 0.918 24 H 0.275 0.725 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.069 0.931 28 H 0.069 0.931 29 H 0.087 0.913 30 H 0.046 0.954 31 H 0.044 0.956 32 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.875 0.433 -6.981 9.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.170 5.170 2 C -0.059 4.059 3 C 0.094 3.906 4 N -0.160 5.160 5 C -0.463 4.463 6 H 0.127 0.873 7 C -0.168 4.168 8 N -0.515 5.515 9 Si 0.755 3.245 10 H -0.200 1.200 11 H -0.208 1.208 12 H -0.191 1.191 13 C 0.257 3.743 14 O -0.481 6.481 15 C -0.142 4.142 16 H 0.114 0.886 17 C -0.139 4.139 18 C -0.192 4.192 19 C -0.020 4.020 20 O -0.300 6.300 21 C -0.006 4.006 22 H 0.164 0.836 23 H 0.100 0.900 24 H 0.086 0.914 25 H 0.086 0.914 26 H 0.086 0.914 27 H 0.088 0.912 28 H 0.087 0.913 29 H 0.105 0.895 30 H 0.064 0.936 31 H 0.063 0.937 32 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 4.011 0.710 -6.775 7.905 hybrid contribution 0.689 -0.754 0.229 1.047 sum 4.700 -0.044 -6.546 8.058 Atomic orbital electron populations 1.80872 1.13811 1.12864 1.09440 1.29429 0.95429 0.89335 0.91715 1.18913 0.81191 0.99736 0.90770 1.43671 1.55813 1.09561 1.06996 1.19830 1.34022 0.82669 1.09784 0.87268 1.25291 0.95182 1.00355 0.95968 1.69854 1.28790 1.36854 1.16002 0.85868 0.78653 0.80891 0.79092 1.20040 1.20846 1.19086 1.20070 0.82456 0.86496 0.85271 1.90560 1.55997 1.16363 1.85159 1.21615 1.01356 0.97648 0.93538 0.88602 1.21389 1.02611 0.96905 0.93011 1.22219 0.99788 0.99368 0.97863 1.22547 0.97312 0.90328 0.91804 1.87944 1.89898 1.32547 1.19636 1.22654 0.94712 0.99368 0.83886 0.83611 0.90032 0.91356 0.91375 0.91378 0.91211 0.91253 0.89481 0.93586 0.93721 0.86187 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.49 -12.54 18.54 42.15 0.78 -11.76 16 2 C 0.26 6.27 14.03 -20.76 -0.29 5.98 16 3 C 0.22 4.85 5.09 -6.83 -0.03 4.82 16 4 N -0.44 -10.00 2.61 -117.93 -0.31 -10.31 16 5 C -0.34 -7.53 7.74 -14.93 -0.12 -7.65 16 6 H 0.11 2.32 5.73 -52.49 -0.30 2.02 16 7 C 0.04 0.82 5.17 -17.47 -0.09 0.73 16 8 N -0.88 -20.86 8.92 55.50 0.50 -20.37 16 9 Si 0.93 18.09 29.57 -169.99 -5.03 13.06 16 10 H -0.27 -5.29 7.11 56.52 0.40 -4.89 16 11 H -0.28 -5.71 7.11 56.52 0.40 -5.30 16 12 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 13 C 0.47 10.39 6.88 -10.99 -0.08 10.32 16 14 O -0.60 -14.53 15.59 5.54 0.09 -14.45 16 15 C -0.12 -2.24 1.88 -91.64 -0.17 -2.42 16 16 H 0.10 1.74 7.19 -51.93 -0.37 1.36 16 17 C -0.10 -1.66 4.69 -26.55 -0.12 -1.78 16 18 C -0.15 -2.03 6.14 -26.59 -0.16 -2.20 16 19 C 0.06 0.78 6.84 37.21 0.25 1.04 16 20 O -0.38 -6.59 10.77 -35.23 -0.38 -6.97 16 21 C 0.07 1.32 5.84 37.20 0.22 1.54 16 22 H 0.15 3.19 5.79 -51.93 -0.30 2.89 16 23 H 0.08 1.66 7.57 -51.93 -0.39 1.27 16 24 H 0.28 6.38 8.31 -40.82 -0.34 6.04 16 25 H 0.07 1.10 8.14 -51.93 -0.42 0.68 16 26 H 0.07 1.19 7.93 -51.93 -0.41 0.78 16 27 H 0.07 0.89 8.14 -51.93 -0.42 0.47 16 28 H 0.07 0.76 8.14 -51.93 -0.42 0.34 16 29 H 0.09 0.98 8.14 -51.93 -0.42 0.56 16 30 H 0.05 0.61 8.14 -51.93 -0.42 0.19 16 31 H 0.04 0.86 8.14 -51.93 -0.42 0.44 16 32 H 0.12 2.43 6.10 -51.93 -0.32 2.11 16 LS Contribution 269.08 15.07 4.05 4.05 Total: -1.00 -27.49 269.08 -4.66 -32.14 By element: Atomic # 1 Polarization: 7.98 SS G_CDS: -3.77 Total: 4.21 kcal Atomic # 6 Polarization: 10.97 SS G_CDS: -0.60 Total: 10.37 kcal Atomic # 7 Polarization: -43.40 SS G_CDS: 0.97 Total: -42.43 kcal Atomic # 8 Polarization: -21.12 SS G_CDS: -0.29 Total: -21.41 kcal Atomic # 14 Polarization: 18.09 SS G_CDS: -5.03 Total: 13.06 kcal Total LS contribution 4.05 Total: 4.05 kcal Total: -27.49 -4.66 -32.14 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000263910884.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.450 kcal (2) G-P(sol) polarization free energy of solvation -27.486 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.936 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.658 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.144 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.594 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds