Wall clock time and date at job start Sun Mar 29 2020 22:33:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.50697 * 109.47213 * 2 1 4 4 N 1.30180 * 126.80165 * 85.02375 * 3 2 1 5 5 O 1.20918 * 111.60807 * 179.97438 * 4 3 2 6 6 C 1.34047 * 111.56591 * 359.97438 * 5 4 3 7 7 C 1.35457 * 106.44351 * 359.75630 * 6 5 4 8 8 C 1.50701 * 128.00415 * 180.23547 * 7 6 5 9 9 N 1.46499 * 109.47338 * 5.03149 * 8 7 6 10 10 C 1.46497 * 120.00195 * 265.07933 * 9 8 7 11 11 C 1.34777 * 119.99932 * 85.07550 * 9 8 7 12 12 O 1.21689 * 119.99803 * 0.02562 * 11 9 8 13 13 C 1.46376 * 120.00151 * 180.02562 * 11 9 8 14 14 H 1.07994 * 119.99896 * 359.97438 * 13 11 9 15 15 C 1.40046 * 120.00003 * 180.02562 * 13 11 9 16 16 N 1.30672 * 120.00064 * 359.97438 * 15 13 11 17 17 Si 1.86798 * 120.00006 * 179.97438 * 15 13 11 18 18 H 1.48496 * 109.47248 * 59.99708 * 17 15 13 19 19 H 1.48507 * 109.47126 * 179.97438 * 17 15 13 20 20 H 1.48501 * 109.46888 * 299.99386 * 17 15 13 21 21 H 1.08998 * 109.47316 * 184.99083 * 1 2 3 22 22 H 1.09008 * 109.47041 * 304.98837 * 1 2 3 23 23 H 1.08993 * 109.47534 * 64.98598 * 1 2 3 24 24 H 1.09003 * 109.46335 * 240.00486 * 2 1 3 25 25 H 1.08998 * 109.47506 * 120.00659 * 2 1 3 26 26 H 1.07995 * 126.77448 * 180.02562 * 6 5 4 27 27 H 1.08994 * 109.47019 * 125.03365 * 8 7 6 28 28 H 1.09005 * 109.46863 * 245.03641 * 8 7 6 29 29 H 1.08994 * 109.47456 * 95.28910 * 10 9 8 30 30 H 1.09002 * 109.47006 * 215.28893 * 10 9 8 31 31 H 1.08997 * 109.47232 * 335.28505 * 10 9 8 32 32 H 0.97008 * 120.00221 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0323 1.4208 0.0000 4 7 2.2071 2.1862 1.0384 5 8 2.6224 3.2770 0.7228 6 6 2.7819 3.3784 -0.6043 7 6 2.4139 2.1842 -1.1271 8 6 2.4089 1.7672 -2.5753 9 7 2.9919 2.8341 -3.3927 10 6 2.1225 3.8227 -4.0353 11 6 4.3281 2.9060 -3.5535 12 8 5.0502 2.0845 -3.0201 13 6 4.9107 3.9723 -4.3698 14 1 4.2698 4.7010 -4.8435 15 6 6.2991 4.0467 -4.5373 16 7 7.0745 3.1646 -3.9645 17 14 7.0425 5.4069 -5.5796 18 1 6.6794 6.7266 -5.0035 19 1 8.5207 5.2650 -5.5976 20 1 6.5186 5.3108 -6.9658 21 1 -0.3634 -1.0237 0.0894 22 1 -0.3633 0.5893 0.8420 23 1 -0.3634 0.4345 -0.9312 24 1 1.8932 -0.5138 -0.8901 25 1 1.8934 -0.5139 0.8899 26 1 3.1380 4.2405 -1.1487 27 1 2.9964 0.8568 -2.6932 28 1 1.3838 1.5824 -2.8966 29 1 2.0504 4.7082 -3.4038 30 1 2.5406 4.0998 -5.0030 31 1 1.1297 3.3958 -4.1772 32 1 8.0363 3.2163 -4.0802 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000330783889.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:33:52 Heat of formation + Delta-G solvation = 18.971709 kcal Electronic energy + Delta-G solvation = -17063.812073 eV Core-core repulsion = 14220.891874 eV Total energy + Delta-G solvation = -2842.920199 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.110 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -44.41397 -37.88161 -35.42124 -34.04468 -32.50341 -31.67582 -30.69051 -27.81301 -26.03529 -24.64841 -24.26378 -21.38240 -20.45627 -19.04607 -17.16065 -16.99735 -16.46558 -15.61449 -14.84907 -14.55369 -14.20888 -14.02862 -13.80290 -13.20344 -12.63482 -12.40904 -12.04421 -11.87598 -11.59847 -11.51840 -11.41337 -11.31175 -11.20266 -10.96561 -10.64294 -10.34983 -10.23221 -9.45265 -8.91652 -8.74265 -7.67615 -7.41980 -6.25573 -4.72431 2.01646 2.69641 3.11460 3.17202 3.18519 3.76033 4.02124 4.40578 4.46579 4.53426 4.94037 5.31192 5.33230 5.45462 5.57943 5.71065 5.76929 5.85400 5.91062 5.92064 6.07341 6.14333 6.27041 6.30451 6.44925 6.46643 6.57522 7.37908 7.49605 8.03175 8.25159 8.71322 8.95569 9.31914 10.50230 10.68795 Molecular weight = 238.11amu Principal moments of inertia in cm(-1) A = 0.038301 B = 0.006428 C = 0.006271 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 730.876993 B = 4355.155925 C = 4463.754487 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.043 4.043 3 C 0.019 3.981 4 N -0.377 5.377 5 O 0.085 5.915 6 C -0.040 4.040 7 C -0.198 4.198 8 C 0.203 3.797 9 N -0.650 5.650 10 C 0.103 3.897 11 C 0.554 3.446 12 O -0.571 6.571 13 C -0.544 4.544 14 H 0.072 0.928 15 C 0.088 3.912 16 N -0.765 5.765 17 Si 0.907 3.093 18 H -0.267 1.267 19 H -0.280 1.280 20 H -0.268 1.268 21 H 0.061 0.939 22 H 0.054 0.946 23 H 0.057 0.943 24 H 0.086 0.914 25 H 0.077 0.923 26 H 0.212 0.788 27 H 0.084 0.916 28 H 0.071 0.929 29 H 0.032 0.968 30 H 0.069 0.931 31 H 0.043 0.957 32 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.861 -0.723 2.257 11.116 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.082 4.082 3 C -0.140 4.140 4 N -0.084 5.084 5 O 0.022 5.978 6 C -0.121 4.121 7 C -0.203 4.203 8 C 0.078 3.922 9 N -0.388 5.388 10 C -0.041 4.041 11 C 0.360 3.640 12 O -0.452 6.452 13 C -0.580 4.580 14 H 0.090 0.910 15 C -0.133 4.133 16 N -0.394 5.394 17 Si 0.731 3.269 18 H -0.192 1.192 19 H -0.205 1.205 20 H -0.192 1.192 21 H 0.080 0.920 22 H 0.073 0.927 23 H 0.077 0.923 24 H 0.104 0.896 25 H 0.095 0.905 26 H 0.229 0.771 27 H 0.102 0.898 28 H 0.089 0.911 29 H 0.050 0.950 30 H 0.088 0.912 31 H 0.062 0.938 32 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -10.422 -1.393 3.887 11.210 hybrid contribution 0.496 0.801 -1.409 1.695 sum -9.926 -0.592 2.478 10.248 Atomic orbital electron populations 1.21703 0.94338 1.01824 1.02265 1.19881 0.95978 0.88647 1.03658 1.23362 1.02912 0.98919 0.88845 1.73709 1.17016 0.93262 1.24405 1.84727 1.61895 1.27192 1.24034 1.25694 1.02285 1.01664 0.82446 1.22020 1.05514 0.93899 0.98898 1.19207 0.97508 0.92594 0.82921 1.48076 1.07638 1.30061 1.53071 1.21413 0.92922 0.91663 0.98142 1.18297 0.78305 0.86047 0.81390 1.90625 1.58458 1.43724 1.52441 1.20964 0.91815 1.12907 1.32339 0.90959 1.25737 0.97241 0.95759 0.94538 1.70008 1.04712 1.30685 1.33969 0.86449 0.78113 0.81609 0.80717 1.19219 1.20549 1.19240 0.91982 0.92652 0.92350 0.89581 0.90463 0.77128 0.89807 0.91132 0.94964 0.91191 0.93770 0.91959 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.58 9.89 37.16 0.37 -1.21 16 2 C -0.04 -0.59 6.45 -27.88 -0.18 -0.77 16 3 C 0.02 0.34 6.58 -82.10 -0.54 -0.20 16 4 N -0.38 -7.06 12.07 33.42 0.40 -6.65 16 5 O 0.09 1.59 11.20 17.16 0.19 1.78 16 6 C -0.04 -0.75 11.62 29.74 0.35 -0.40 16 7 C -0.20 -3.70 6.22 -104.42 -0.65 -4.35 16 8 C 0.20 3.79 5.87 -5.19 -0.03 3.76 16 9 N -0.65 -13.79 2.32 -184.64 -0.43 -14.22 16 10 C 0.10 1.74 10.04 59.85 0.60 2.34 16 11 C 0.55 14.95 7.52 -12.99 -0.10 14.85 16 12 O -0.57 -17.83 14.68 5.20 0.08 -17.76 16 13 C -0.54 -14.56 8.73 -35.63 -0.31 -14.87 16 14 H 0.07 1.75 6.11 -52.49 -0.32 1.43 16 15 C 0.09 2.36 5.50 -17.37 -0.10 2.26 16 16 N -0.77 -22.40 11.83 55.55 0.66 -21.74 16 17 Si 0.91 19.49 29.56 -169.99 -5.02 14.46 16 18 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 19 H -0.28 -5.95 7.11 56.52 0.40 -5.55 16 20 H -0.27 -5.59 7.11 56.52 0.40 -5.18 16 21 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 22 H 0.05 0.64 8.14 -51.92 -0.42 0.22 16 23 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 24 H 0.09 1.09 8.08 -51.93 -0.42 0.67 16 25 H 0.08 0.99 8.14 -51.93 -0.42 0.57 16 26 H 0.21 3.83 7.95 -52.49 -0.42 3.42 16 27 H 0.08 1.73 7.57 -51.93 -0.39 1.33 16 28 H 0.07 1.07 7.79 -51.93 -0.40 0.67 16 29 H 0.03 0.51 8.14 -51.93 -0.42 0.09 16 30 H 0.07 1.22 6.41 -51.93 -0.33 0.89 16 31 H 0.04 0.61 7.79 -51.93 -0.40 0.21 16 32 H 0.27 7.21 8.29 -40.82 -0.34 6.87 16 LS Contribution 282.12 15.07 4.25 4.25 Total: -1.00 -33.27 282.12 -4.40 -37.67 By element: Atomic # 1 Polarization: 4.72 SS G_CDS: -3.94 Total: 0.78 kcal Atomic # 6 Polarization: 2.01 SS G_CDS: -0.59 Total: 1.42 kcal Atomic # 7 Polarization: -43.24 SS G_CDS: 0.63 Total: -42.61 kcal Atomic # 8 Polarization: -16.24 SS G_CDS: 0.27 Total: -15.97 kcal Atomic # 14 Polarization: 19.49 SS G_CDS: -5.02 Total: 14.46 kcal Total LS contribution 4.25 Total: 4.25 kcal Total: -33.27 -4.40 -37.67 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000330783889.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.644 kcal (2) G-P(sol) polarization free energy of solvation -33.268 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.672 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds