Wall clock time and date at job start Sun Mar 29 2020 21:49:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.28525 * 124.44292 * 2 1 4 4 C 1.31137 * 109.05849 * 179.97438 * 3 2 1 5 5 C 1.40921 * 105.77532 * 0.02562 * 4 3 2 6 6 C 1.47801 * 127.23622 * 179.97438 * 5 4 3 7 7 O 1.21563 * 119.99921 * 0.02562 * 6 5 4 8 8 N 1.34777 * 120.00087 * 179.72915 * 6 5 4 9 9 C 1.46504 * 119.99854 * 180.27945 * 8 6 5 10 10 C 1.53004 * 109.46928 * 179.97438 * 9 8 6 11 11 C 1.53000 * 109.46988 * 179.97438 * 10 9 8 12 12 C 1.50701 * 109.46983 * 179.97438 * 11 10 9 13 13 H 1.08000 * 119.99624 * 359.97438 * 12 11 10 14 14 C 1.37869 * 120.00027 * 179.97438 * 12 11 10 15 15 N 1.31517 * 120.00263 * 0.02562 * 14 12 11 16 16 Si 1.86797 * 120.00327 * 180.02562 * 14 12 11 17 17 H 1.48504 * 109.47120 * 60.00315 * 16 14 12 18 18 H 1.48505 * 109.47524 * 180.02562 * 16 14 12 19 19 H 1.48501 * 109.47077 * 300.00283 * 16 14 12 20 20 N 1.28588 * 124.44518 * 180.31484 * 2 1 3 21 21 H 1.08997 * 109.47269 * 90.02294 * 1 2 3 22 22 H 1.08996 * 109.46991 * 210.02314 * 1 2 3 23 23 H 1.09005 * 109.46910 * 330.01939 * 1 2 3 24 24 H 1.07998 * 127.10685 * 180.02562 * 4 3 2 25 25 H 0.97000 * 119.99736 * 0.27219 * 8 6 5 26 26 H 1.08992 * 109.46803 * 299.99362 * 9 8 6 27 27 H 1.08997 * 109.47198 * 59.99605 * 9 8 6 28 28 H 1.09007 * 109.46621 * 299.99773 * 10 9 8 29 29 H 1.08997 * 109.46991 * 59.99522 * 10 9 8 30 30 H 1.08998 * 109.46983 * 299.99930 * 11 10 9 31 31 H 1.08997 * 109.47123 * 59.99717 * 11 10 9 32 32 H 0.96994 * 120.00789 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1919 1.0599 0.0000 4 6 3.4563 0.7120 0.0006 5 6 3.4659 -0.6971 0.0003 6 6 4.6487 -1.5834 0.0002 7 8 5.7664 -1.1054 0.0008 8 7 4.4881 -2.9216 0.0055 9 6 5.6605 -3.8000 0.0116 10 6 5.2037 -5.2603 0.0174 11 6 6.4281 -6.1777 0.0231 12 6 5.9781 -7.6159 0.0295 13 1 4.9242 -7.8519 0.0299 14 6 6.9118 -8.6303 0.0348 15 7 8.1951 -8.3429 0.0348 16 14 6.3541 -10.4131 0.0420 17 1 5.5394 -10.6818 -1.1703 18 1 7.5425 -11.3036 0.0476 19 1 5.5369 -10.6712 1.2548 20 7 2.1923 -1.0604 -0.0058 21 1 -0.3633 -0.0004 -1.0276 22 1 -0.3633 -0.8898 0.5142 23 1 -0.3633 0.8902 0.5136 24 1 4.3130 1.3696 0.0011 25 1 3.5962 -3.3030 0.0054 26 1 6.2611 -3.6105 -0.8780 27 1 6.2576 -3.6029 0.9019 28 1 4.6032 -5.4495 0.9073 29 1 4.6063 -5.4576 -0.8727 30 1 7.0281 -5.9883 -0.8669 31 1 7.0258 -5.9804 0.9130 32 1 8.8521 -9.0565 0.0382 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000284081322.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 21:49:54 Heat of formation + Delta-G solvation = 58.615553 kcal Electronic energy + Delta-G solvation = -15815.165594 eV Core-core repulsion = 13006.257232 eV Total energy + Delta-G solvation = -2808.908362 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 238.117 amu Computer time = 0.29 seconds Orbital eigenvalues (eV) -43.83662 -39.29817 -35.45328 -34.05384 -33.41945 -32.79097 -31.12563 -28.43144 -26.78623 -24.36223 -22.67047 -22.27796 -20.71181 -20.03617 -17.89425 -17.22408 -16.93754 -16.37157 -15.43974 -15.26406 -14.96766 -14.44754 -13.94832 -13.80468 -13.32049 -13.27676 -12.28322 -12.13961 -11.81194 -11.74303 -11.23852 -10.88086 -10.73451 -10.64814 -10.63082 -10.19497 -9.85557 -9.64885 -9.42359 -9.12820 -8.80645 -8.35933 -6.00731 -4.03878 1.16881 1.77702 1.91989 3.23860 3.30182 3.32973 3.37685 3.39846 3.76484 4.45169 4.59181 4.59792 4.76950 4.86821 5.00589 5.34949 5.46583 5.69400 5.77871 5.80594 6.16415 6.26455 6.43361 6.60388 6.82196 7.00135 7.60077 7.64407 7.77235 7.92840 7.97965 8.26692 8.39436 9.02576 9.60224 11.10557 Molecular weight = 238.12amu Principal moments of inertia in cm(-1) A = 0.046941 B = 0.003751 C = 0.003486 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 596.346537 B = 7463.788555 C = 8029.075231 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.104 3.896 2 N -0.147 5.147 3 N -0.294 5.294 4 C 0.034 3.966 5 C -0.041 4.041 6 C 0.602 3.398 7 O -0.531 6.531 8 N -0.708 5.708 9 C 0.115 3.885 10 C -0.121 4.121 11 C 0.024 3.976 12 C -0.523 4.523 13 H 0.055 0.945 14 C 0.057 3.943 15 N -0.894 5.894 16 Si 0.893 3.107 17 H -0.277 1.277 18 H -0.287 1.287 19 H -0.277 1.277 20 N -0.251 5.251 21 H 0.093 0.907 22 H 0.106 0.894 23 H 0.105 0.895 24 H 0.209 0.791 25 H 0.405 0.595 26 H 0.069 0.931 27 H 0.069 0.931 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.020 0.980 31 H 0.020 0.980 32 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.344 16.393 -0.006 22.454 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.035 4.035 2 N -0.050 5.050 3 N -0.134 5.134 4 C -0.149 4.149 5 C -0.204 4.204 6 C 0.384 3.616 7 O -0.406 6.406 8 N -0.359 5.359 9 C -0.007 4.007 10 C -0.159 4.159 11 C -0.014 4.014 12 C -0.562 4.562 13 H 0.073 0.927 14 C -0.144 4.144 15 N -0.533 5.533 16 Si 0.721 3.279 17 H -0.202 1.202 18 H -0.213 1.213 19 H -0.203 1.203 20 N -0.099 5.099 21 H 0.111 0.889 22 H 0.125 0.875 23 H 0.124 0.876 24 H 0.225 0.775 25 H 0.240 0.760 26 H 0.087 0.913 27 H 0.087 0.913 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.038 0.962 31 H 0.038 0.962 32 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -15.708 16.624 -0.009 22.871 hybrid contribution 0.145 -1.181 -0.018 1.190 sum -15.563 15.443 -0.027 21.925 Atomic orbital electron populations 1.22242 0.69731 1.06224 1.05334 1.48042 1.09220 0.99287 1.48403 1.74008 1.03925 1.15502 1.19942 1.24863 0.94218 0.93773 1.02087 1.23236 0.91376 0.94967 1.10813 1.16666 0.85814 0.81876 0.77256 1.90819 1.23703 1.75434 1.50601 1.46082 1.11581 1.05137 1.73051 1.21754 0.86561 0.89987 1.02381 1.21905 1.01601 0.91392 1.01051 1.19028 0.91609 0.92993 0.97722 1.21171 0.92800 0.91142 1.51038 0.92680 1.25023 0.94918 0.99220 0.95273 1.69951 1.00174 1.32690 1.50494 0.86640 0.78009 0.84642 0.78584 1.20247 1.21278 1.20252 1.74395 1.03135 1.15638 1.16777 0.88867 0.87534 0.87623 0.77452 0.76048 0.91314 0.91313 0.92614 0.92618 0.96192 0.96198 0.92861 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 0.49 11.55 59.85 0.69 1.18 16 2 N -0.15 -1.51 4.35 -16.64 -0.07 -1.58 16 3 N -0.29 -3.36 12.01 30.90 0.37 -2.99 16 4 C 0.03 0.41 12.04 -16.83 -0.20 0.21 16 5 C -0.04 -0.56 7.21 -82.68 -0.60 -1.15 16 6 C 0.60 9.58 7.83 -12.35 -0.10 9.49 16 7 O -0.53 -9.92 16.95 5.31 0.09 -9.83 16 8 N -0.71 -10.90 5.55 -61.26 -0.34 -11.24 16 9 C 0.12 2.04 5.67 -4.04 -0.02 2.02 16 10 C -0.12 -2.39 5.27 -26.73 -0.14 -2.53 16 11 C 0.02 0.61 4.97 -27.88 -0.14 0.47 16 12 C -0.52 -14.63 9.11 -34.44 -0.31 -14.94 16 13 H 0.05 1.48 7.74 -52.49 -0.41 1.07 16 14 C 0.06 1.63 5.46 -17.82 -0.10 1.53 16 15 N -0.89 -26.83 13.29 55.43 0.74 -26.10 16 16 Si 0.89 21.50 29.54 -169.99 -5.02 16.48 16 17 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 18 H -0.29 -6.85 7.11 56.52 0.40 -6.45 16 19 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 20 N -0.25 -3.10 11.84 33.42 0.40 -2.71 16 21 H 0.09 0.29 8.14 -51.93 -0.42 -0.13 16 22 H 0.11 0.34 8.14 -51.93 -0.42 -0.08 16 23 H 0.11 0.30 8.14 -51.93 -0.42 -0.13 16 24 H 0.21 1.99 8.06 -52.49 -0.42 1.57 16 25 H 0.40 5.48 8.24 -40.82 -0.34 5.15 16 26 H 0.07 1.26 8.14 -51.93 -0.42 0.84 16 27 H 0.07 1.26 8.14 -51.93 -0.42 0.84 16 28 H 0.06 1.06 8.14 -51.93 -0.42 0.63 16 29 H 0.06 1.06 8.14 -51.93 -0.42 0.63 16 30 H 0.02 0.53 8.14 -51.93 -0.42 0.11 16 31 H 0.02 0.53 8.14 -51.93 -0.42 0.11 16 32 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 LS Contribution 289.58 15.07 4.36 4.36 Total: -1.00 -33.84 289.58 -4.50 -38.34 By element: Atomic # 1 Polarization: 3.10 SS G_CDS: -4.11 Total: -1.01 kcal Atomic # 6 Polarization: -2.81 SS G_CDS: -0.92 Total: -3.73 kcal Atomic # 7 Polarization: -45.70 SS G_CDS: 1.09 Total: -44.61 kcal Atomic # 8 Polarization: -9.92 SS G_CDS: 0.09 Total: -9.83 kcal Atomic # 14 Polarization: 21.50 SS G_CDS: -5.02 Total: 16.48 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -33.84 -4.50 -38.34 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000284081322.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.952 kcal (2) G-P(sol) polarization free energy of solvation -33.838 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 63.114 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.499 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.337 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.616 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds