Wall clock time and date at job start Sun Mar 29 2020 22:18:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35963 * 116.99418 * 2 1 4 4 C 1.38524 * 120.07591 * 359.71838 * 3 2 1 5 5 C 1.38241 * 120.04715 * 180.26005 * 4 3 2 6 6 C 1.38621 * 120.20114 * 0.04107 * 5 4 3 7 7 F 1.35106 * 119.92560 * 179.97438 * 6 5 4 8 8 C 1.38259 * 120.14375 * 359.95683 * 6 5 4 9 9 C 1.38927 * 119.95221 * 0.02613 * 8 6 5 10 10 N 1.39533 * 120.10163 * 179.97438 * 9 8 6 11 11 C 1.34779 * 120.00034 * 24.84844 * 10 9 8 12 12 O 1.21770 * 119.99929 * 5.52476 * 11 10 9 13 13 C 1.41793 * 120.00070 * 185.53200 * 11 10 9 14 14 H 1.07995 * 119.99856 * 5.01420 * 13 11 10 15 15 C 1.40138 * 119.99698 * 185.02082 * 13 11 10 16 16 N 1.30632 * 120.00400 * 354.97309 * 15 13 11 17 17 Si 1.86805 * 119.99829 * 174.97680 * 15 13 11 18 18 H 1.48500 * 109.47319 * 94.99640 * 17 15 13 19 19 H 1.48505 * 109.46892 * 214.99771 * 17 15 13 20 20 H 1.48500 * 109.47018 * 334.99753 * 17 15 13 21 21 H 1.09004 * 109.46514 * 180.02562 * 1 2 3 22 22 H 1.08996 * 109.47355 * 300.00281 * 1 2 3 23 23 H 1.09000 * 109.47046 * 60.00468 * 1 2 3 24 24 H 1.07994 * 119.97873 * 0.25519 * 4 3 2 25 25 H 1.08001 * 119.89912 * 180.02562 * 5 4 3 26 26 H 1.08002 * 120.02585 * 180.02562 * 8 6 5 27 27 H 0.97002 * 120.00500 * 204.84949 * 10 9 8 28 28 H 0.96992 * 119.99902 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 1.2932 2.3742 -0.0059 5 6 1.9213 3.6056 -0.0113 6 6 3.3054 3.6825 -0.0118 7 9 3.9134 4.8890 -0.0176 8 6 4.0649 2.5272 -0.0058 9 6 3.4401 1.2864 0.0000 10 7 4.2035 0.1184 0.0054 11 6 5.4588 0.1362 0.4958 12 8 5.8914 1.1438 1.0253 13 6 6.2757 -1.0184 0.3949 14 1 5.9226 -1.8842 -0.1455 15 6 7.5413 -1.0359 0.9966 16 7 8.0091 0.0429 1.5656 17 14 8.5593 -2.6021 0.9849 18 1 9.4978 -2.5740 -0.1657 19 1 9.3303 -2.7008 2.2502 20 1 7.6592 -3.7767 0.8608 21 1 -0.3632 -1.0277 0.0005 22 1 -0.3634 0.5138 0.8899 23 1 -0.3633 0.5138 -0.8900 24 1 0.2147 2.3186 -0.0063 25 1 1.3318 4.5106 -0.0155 26 1 5.1431 2.5893 -0.0058 27 1 3.8309 -0.7063 -0.3437 28 1 8.8851 0.0307 1.9816 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258725184.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:18:54 Heat of formation + Delta-G solvation = -91.954007 kcal Electronic energy + Delta-G solvation = -16585.040919 eV Core-core repulsion = 13516.131653 eV Total energy + Delta-G solvation = -3068.909266 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 239.074 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -48.25941 -39.90607 -37.91659 -36.30781 -33.54564 -32.45612 -29.68160 -28.99676 -27.06590 -26.32604 -22.61805 -21.68816 -20.02728 -18.02080 -17.49376 -16.88036 -16.16325 -15.59631 -15.41422 -14.89126 -14.82328 -14.28483 -14.16506 -13.60275 -13.00039 -12.67432 -12.48773 -12.23780 -11.93515 -11.53992 -11.39216 -11.12167 -10.79180 -10.61258 -10.56887 -10.35762 -9.52224 -8.93449 -8.05303 -7.65847 -6.92364 -6.40788 -4.93027 1.74487 1.78505 3.04134 3.12087 3.16228 3.53686 3.95268 4.03976 4.44946 4.47639 4.89789 5.12750 5.21065 5.25339 5.41509 5.54104 5.66276 5.78634 6.03443 6.27811 6.50198 6.63568 6.79940 7.20848 7.33653 7.56324 7.82506 8.00545 8.14524 8.77162 9.23286 10.33691 10.52887 Molecular weight = 239.07amu Principal moments of inertia in cm(-1) A = 0.027678 B = 0.007318 C = 0.005878 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1011.405676 B = 3825.073545 C = 4762.136014 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.316 6.316 3 C 0.049 3.951 4 C -0.158 4.158 5 C -0.173 4.173 6 C 0.087 3.913 7 F -0.146 7.146 8 C -0.150 4.150 9 C 0.205 3.795 10 N -0.685 5.685 11 C 0.541 3.459 12 O -0.565 6.565 13 C -0.535 4.535 14 H 0.072 0.928 15 C 0.088 3.912 16 N -0.745 5.745 17 Si 0.914 3.086 18 H -0.270 1.270 19 H -0.276 1.276 20 H -0.262 1.262 21 H 0.095 0.905 22 H 0.051 0.949 23 H 0.050 0.950 24 H 0.129 0.871 25 H 0.126 0.874 26 H 0.171 0.829 27 H 0.399 0.601 28 H 0.274 0.726 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.664 0.138 -3.485 12.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.230 6.230 3 C 0.001 3.999 4 C -0.178 4.178 5 C -0.194 4.194 6 C 0.067 3.933 7 F -0.125 7.125 8 C -0.172 4.172 9 C 0.103 3.897 10 N -0.326 5.326 11 C 0.351 3.649 12 O -0.449 6.449 13 C -0.570 4.570 14 H 0.090 0.910 15 C -0.136 4.136 16 N -0.372 5.372 17 Si 0.738 3.262 18 H -0.195 1.195 19 H -0.202 1.202 20 H -0.186 1.186 21 H 0.113 0.887 22 H 0.069 0.931 23 H 0.069 0.931 24 H 0.147 0.853 25 H 0.144 0.856 26 H 0.188 0.812 27 H 0.233 0.767 28 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -10.975 0.697 -2.996 11.398 hybrid contribution 0.034 -0.794 -0.104 0.802 sum -10.941 -0.097 -3.101 11.372 Atomic orbital electron populations 1.22944 0.79216 1.03338 1.00848 1.86023 1.20561 1.26561 1.89835 1.18789 0.90753 0.84648 1.05691 1.20629 0.99220 0.91077 1.06840 1.20589 0.92484 0.98010 1.08296 1.17477 0.90460 0.80372 1.04966 1.91439 1.83883 1.42888 1.94284 1.21481 1.03292 0.88744 1.03698 1.17085 0.86473 0.88726 0.97395 1.44100 1.16248 1.08600 1.63693 1.17119 0.78747 0.90155 0.78919 1.90603 1.72019 1.34655 1.47639 1.20058 1.00675 1.00660 1.35605 0.90954 1.25773 0.97529 0.97140 0.93116 1.70005 1.15980 1.27432 1.23829 0.86247 0.79743 0.81847 0.78386 1.19538 1.20155 1.18575 0.88708 0.93075 0.93125 0.85282 0.85626 0.81206 0.76684 0.91535 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.34 9.81 101.05 0.99 1.34 15 2 O -0.32 -5.12 9.91 -19.63 -0.19 -5.31 15 3 C 0.05 0.89 6.71 -38.97 -0.26 0.62 15 4 C -0.16 -2.45 9.03 -39.48 -0.36 -2.80 15 5 C -0.17 -2.82 10.02 -39.44 -0.40 -3.22 15 6 C 0.09 1.71 7.29 -39.43 -0.29 1.42 15 7 F -0.15 -2.86 17.26 2.25 0.04 -2.82 15 8 C -0.15 -3.38 8.69 -39.32 -0.34 -3.72 15 9 C 0.21 4.47 6.44 -83.59 -0.54 3.93 15 10 N -0.69 -15.96 5.26 -12.31 -0.06 -16.02 15 11 C 0.54 15.07 7.37 -14.90 -0.11 14.96 15 12 O -0.57 -17.56 12.05 5.13 0.06 -17.49 15 13 C -0.54 -14.55 9.31 -37.51 -0.35 -14.90 15 14 H 0.07 1.79 7.85 -52.49 -0.41 1.38 15 15 C 0.09 2.34 5.49 -17.35 -0.10 2.25 15 16 N -0.75 -21.37 11.75 55.55 0.65 -20.72 15 17 Si 0.91 19.23 29.56 -169.99 -5.03 14.21 15 18 H -0.27 -5.56 7.11 56.52 0.40 -5.16 15 19 H -0.28 -5.71 7.11 56.52 0.40 -5.31 15 20 H -0.26 -5.34 7.11 56.52 0.40 -4.94 15 21 H 0.09 0.81 8.14 -51.93 -0.42 0.38 15 22 H 0.05 0.50 7.67 -51.93 -0.40 0.10 15 23 H 0.05 0.47 7.65 -51.93 -0.40 0.07 15 24 H 0.13 1.52 6.29 -52.49 -0.33 1.19 15 25 H 0.13 1.68 8.06 -52.49 -0.42 1.25 15 26 H 0.17 4.40 5.78 -52.49 -0.30 4.09 15 27 H 0.40 8.26 8.30 -40.82 -0.34 7.93 15 28 H 0.27 7.07 8.29 -40.82 -0.34 6.73 15 LS Contribution 255.33 15.07 3.85 3.85 Total: -1.00 -32.13 255.33 -4.59 -36.71 By element: Atomic # 1 Polarization: 9.89 SS G_CDS: -2.16 Total: 7.73 kcal Atomic # 6 Polarization: 1.62 SS G_CDS: -1.74 Total: -0.13 kcal Atomic # 7 Polarization: -37.33 SS G_CDS: 0.59 Total: -36.74 kcal Atomic # 8 Polarization: -22.67 SS G_CDS: -0.13 Total: -22.81 kcal Atomic # 9 Polarization: -2.86 SS G_CDS: 0.04 Total: -2.82 kcal Atomic # 14 Polarization: 19.23 SS G_CDS: -5.03 Total: 14.21 kcal Total LS contribution 3.85 Total: 3.85 kcal Total: -32.13 -4.59 -36.71 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258725184.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.241 kcal (2) G-P(sol) polarization free energy of solvation -32.126 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.367 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.587 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.713 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.954 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds