Wall clock time and date at job start Sun Mar 29 2020 22:44:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38142 * 119.97692 * 2 1 4 4 C 1.38726 * 119.95457 * 180.29581 * 3 2 1 5 5 O 1.35925 * 120.04403 * 179.74864 * 4 3 2 6 6 C 1.42900 * 116.99645 * 359.97438 * 5 4 3 7 7 C 1.50707 * 109.46810 * 179.97438 * 6 5 4 8 8 H 1.07993 * 120.00036 * 0.02562 * 7 6 5 9 9 C 1.37878 * 119.99789 * 179.97438 * 7 6 5 10 10 N 1.31515 * 119.99965 * 0.02562 * 9 7 6 11 11 Si 1.86797 * 119.99898 * 179.97438 * 9 7 6 12 12 H 1.48505 * 109.46795 * 60.00481 * 11 9 7 13 13 H 1.48500 * 109.47188 * 180.02562 * 11 9 7 14 14 H 1.48500 * 109.47381 * 300.00431 * 11 9 7 15 15 C 1.38722 * 119.91383 * 359.73086 * 4 3 2 16 16 C 1.38142 * 119.95901 * 359.97438 * 15 4 3 17 17 C 1.50697 * 119.97923 * 180.02562 * 16 15 4 18 18 C 1.38363 * 119.97691 * 179.75113 * 2 1 3 19 19 Cl 1.73599 * 119.96106 * 359.97438 * 18 2 1 20 20 H 1.09003 * 109.47073 * 270.25069 * 1 2 3 21 21 H 1.08998 * 109.47040 * 30.25094 * 1 2 3 22 22 H 1.09001 * 109.46915 * 150.24861 * 1 2 3 23 23 H 1.07994 * 120.02804 * 0.03075 * 3 2 1 24 24 H 1.09002 * 109.47373 * 299.99517 * 6 5 4 25 25 H 1.08999 * 109.47109 * 60.00061 * 6 5 4 26 26 H 0.97006 * 119.99727 * 179.97438 * 10 9 7 27 27 H 1.08006 * 120.01874 * 179.97438 * 15 4 3 28 28 H 1.09004 * 109.47074 * 269.97940 * 17 16 15 29 29 H 1.08997 * 109.47165 * 29.97862 * 17 16 15 30 30 H 1.08995 * 109.47348 * 149.97511 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1972 1.1966 0.0000 4 6 3.5845 1.1961 -0.0062 5 8 4.2655 2.3724 -0.0114 6 6 3.4885 3.5718 -0.0106 7 6 4.4079 4.7659 -0.0162 8 1 5.4783 4.6232 -0.0203 9 6 3.8823 6.0406 -0.0171 10 7 2.5787 6.2143 -0.0125 11 14 5.0218 7.5207 -0.0232 12 1 5.8748 7.4835 -1.2383 13 1 4.2144 8.7670 -0.0226 14 1 5.8821 7.4881 1.1868 15 6 4.2758 -0.0066 -0.0068 16 6 3.5820 -1.2011 -0.0006 17 6 4.3326 -2.5079 -0.0006 18 6 2.1983 -1.1985 0.0052 19 17 1.3287 -2.7010 0.0124 20 1 -0.3633 0.0045 1.0277 21 1 -0.3633 0.8877 -0.5177 22 1 -0.3633 -0.8922 -0.5100 23 1 1.6574 2.1319 0.0005 24 1 2.8561 3.5956 -0.8981 25 1 2.8633 3.5991 0.8819 26 1 2.2089 7.1111 -0.0128 27 1 5.3559 -0.0090 -0.0120 28 1 4.5086 -2.8258 -1.0283 29 1 5.2877 -2.3783 0.5083 30 1 3.7444 -3.2648 0.5182 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000020136124.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:44:42 Heat of formation + Delta-G solvation = -44.090137 kcal Electronic energy + Delta-G solvation = -14480.053853 eV Core-core repulsion = 11879.670928 eV Total energy + Delta-G solvation = -2600.382925 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 240.066 amu Computer time = 0.20 seconds Orbital eigenvalues (eV) -39.71230 -37.37656 -35.89801 -33.48404 -32.98203 -30.41441 -27.80059 -26.96480 -26.45432 -23.13335 -21.17814 -20.43739 -17.07510 -16.60184 -16.01527 -15.66534 -14.85677 -14.58765 -13.89718 -13.65736 -13.18584 -13.09273 -12.79296 -12.57847 -12.14887 -11.89272 -11.75603 -11.41412 -11.35752 -11.03271 -10.97413 -10.87886 -10.40660 -10.18879 -9.87821 -9.35176 -8.63030 -8.41550 -7.52635 -6.28985 -4.33178 1.53386 1.63968 2.43996 3.23654 3.26784 3.29861 3.94370 4.07453 4.43008 4.88722 4.99242 5.08341 5.38541 5.50388 5.59133 5.66699 5.67938 5.77005 5.86200 5.99272 6.07490 6.35352 6.49513 6.60923 6.68723 6.88672 7.05154 7.07653 7.62786 7.89514 8.37313 8.78155 9.32241 10.82170 Molecular weight = 240.07amu Principal moments of inertia in cm(-1) A = 0.046635 B = 0.005165 C = 0.004670 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 600.260589 B = 5419.787832 C = 5994.294455 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.032 4.032 3 C -0.209 4.209 4 C 0.167 3.833 5 O -0.312 6.312 6 C 0.192 3.808 7 C -0.526 4.526 8 H 0.070 0.930 9 C 0.062 3.938 10 N -0.894 5.894 11 Si 0.914 3.086 12 H -0.273 1.273 13 H -0.284 1.284 14 H -0.273 1.273 15 C -0.167 4.167 16 C -0.038 4.038 17 C -0.114 4.114 18 C -0.095 4.095 19 Cl -0.086 7.086 20 H 0.074 0.926 21 H 0.071 0.929 22 H 0.071 0.929 23 H 0.141 0.859 24 H 0.023 0.977 25 H 0.023 0.977 26 H 0.268 0.732 27 H 0.134 0.866 28 H 0.073 0.927 29 H 0.069 0.931 30 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.967 -14.290 0.027 14.425 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C -0.033 4.033 3 C -0.228 4.228 4 C 0.118 3.882 5 O -0.224 6.224 6 C 0.119 3.881 7 C -0.564 4.564 8 H 0.089 0.911 9 C -0.141 4.141 10 N -0.532 5.532 11 Si 0.741 3.259 12 H -0.198 1.198 13 H -0.210 1.210 14 H -0.198 1.198 15 C -0.186 4.186 16 C -0.039 4.039 17 C -0.171 4.171 18 C -0.121 4.121 19 Cl -0.058 7.058 20 H 0.092 0.908 21 H 0.090 0.910 22 H 0.089 0.911 23 H 0.159 0.841 24 H 0.041 0.959 25 H 0.041 0.959 26 H 0.078 0.922 27 H 0.152 0.848 28 H 0.091 0.909 29 H 0.088 0.912 30 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -1.981 -14.209 0.027 14.346 hybrid contribution 0.121 0.894 -0.003 0.902 sum -1.860 -13.315 0.024 13.445 Atomic orbital electron populations 1.20863 0.90654 1.03201 1.02746 1.19475 0.96259 0.90816 0.96775 1.21283 0.93639 0.98510 1.09346 1.19282 0.90461 0.87692 0.90745 1.86148 1.37859 1.12964 1.85478 1.20702 0.92168 0.78209 0.97009 1.20925 0.93937 0.88993 1.52565 0.91135 1.24930 0.95550 0.99051 0.94567 1.69938 1.10752 1.23198 1.49333 0.86291 0.80112 0.80504 0.79024 1.19815 1.20951 1.19820 1.20188 1.00164 0.88865 1.09335 1.19373 0.91291 0.95436 0.97775 1.20821 0.99915 0.93716 1.02653 1.20305 0.91327 0.85812 1.14692 1.98284 1.76806 1.33258 1.97416 0.90778 0.91017 0.91052 0.84083 0.95917 0.95918 0.92213 0.84846 0.90856 0.91195 0.91014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.58 9.61 36.01 0.35 -1.23 16 2 C -0.03 -0.53 5.88 -104.61 -0.62 -1.14 16 3 C -0.21 -3.96 8.69 -39.44 -0.34 -4.30 16 4 C 0.17 3.39 6.69 -39.22 -0.26 3.12 16 5 O -0.31 -7.46 10.12 -19.50 -0.20 -7.66 16 6 C 0.19 5.02 4.49 36.01 0.16 5.18 16 7 C -0.53 -14.84 9.43 -34.44 -0.32 -15.17 16 8 H 0.07 1.96 7.81 -52.49 -0.41 1.55 16 9 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 10 N -0.89 -25.57 13.29 55.43 0.74 -24.84 16 11 Si 0.91 21.02 29.54 -169.99 -5.02 16.00 16 12 H -0.27 -6.17 7.11 56.52 0.40 -5.77 16 13 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 14 H -0.27 -6.17 7.11 56.52 0.40 -5.77 16 15 C -0.17 -2.87 9.64 -39.44 -0.38 -3.25 16 16 C -0.04 -0.58 5.88 -104.61 -0.62 -1.19 16 17 C -0.11 -1.33 9.61 36.00 0.35 -0.98 16 18 C -0.09 -1.47 6.31 -39.49 -0.25 -1.72 16 19 Cl -0.09 -1.13 25.62 -51.86 -1.33 -2.45 16 20 H 0.07 0.91 8.14 -51.93 -0.42 0.49 16 21 H 0.07 0.92 8.09 -51.93 -0.42 0.50 16 22 H 0.07 0.87 6.90 -51.93 -0.36 0.51 16 23 H 0.14 2.79 6.30 -52.49 -0.33 2.46 16 24 H 0.02 0.62 7.66 -51.93 -0.40 0.22 16 25 H 0.02 0.62 7.66 -51.93 -0.40 0.22 16 26 H 0.27 7.20 8.31 -40.82 -0.34 6.86 16 27 H 0.13 2.09 8.06 -52.48 -0.42 1.67 16 28 H 0.07 0.77 8.14 -51.93 -0.42 0.35 16 29 H 0.07 0.72 8.08 -51.93 -0.42 0.30 16 30 H 0.07 0.78 6.90 -51.93 -0.36 0.42 16 LS Contribution 273.63 15.07 4.12 4.12 Total: -1.00 -28.66 273.63 -7.22 -35.88 By element: Atomic # 1 Polarization: 1.51 SS G_CDS: -3.50 Total: -1.98 kcal Atomic # 6 Polarization: -17.04 SS G_CDS: -2.03 Total: -19.07 kcal Atomic # 7 Polarization: -25.57 SS G_CDS: 0.74 Total: -24.84 kcal Atomic # 8 Polarization: -7.46 SS G_CDS: -0.20 Total: -7.66 kcal Atomic # 14 Polarization: 21.02 SS G_CDS: -5.02 Total: 16.00 kcal Atomic # 17 Polarization: -1.13 SS G_CDS: -1.33 Total: -2.45 kcal Total LS contribution 4.12 Total: 4.12 kcal Total: -28.66 -7.22 -35.88 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000020136124.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.210 kcal (2) G-P(sol) polarization free energy of solvation -28.665 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.215 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.880 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.090 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.20 seconds