Wall clock time and date at job start Sun Mar 29 2020 22:23:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53002 * 109.46803 * 2 1 4 4 N 1.46500 * 109.46883 * 180.02562 * 3 2 1 5 5 C 1.36939 * 119.99689 * 271.61383 * 4 3 2 6 6 H 1.07999 * 120.00432 * 326.17142 * 5 4 3 7 7 C 1.38820 * 119.99854 * 146.16782 * 5 4 3 8 8 N 1.31614 * 119.99948 * 336.41310 * 7 5 4 9 9 Si 1.86801 * 119.99895 * 156.40961 * 7 5 4 10 10 H 1.48498 * 109.46888 * 84.96831 * 9 7 5 11 11 H 1.48498 * 109.47012 * 204.96959 * 9 7 5 12 12 H 1.48500 * 109.46988 * 324.97147 * 9 7 5 13 13 C 1.46500 * 120.00439 * 91.61376 * 4 3 2 14 14 C 1.50699 * 109.47097 * 89.99924 * 13 4 3 15 15 N 1.30737 * 125.53600 * 0.02761 * 14 13 4 16 16 C 1.34451 * 109.93945 * 179.97438 * 15 14 13 17 17 O 1.21728 * 125.91948 * 180.02562 * 16 15 14 18 18 N 1.34994 * 108.15443 * 359.97438 * 16 15 14 19 19 C 1.46499 * 126.86021 * 179.97438 * 18 16 15 20 20 N 1.35154 * 125.54199 * 179.71486 * 14 13 4 21 21 H 0.97006 * 126.64559 * 0.05081 * 20 14 13 22 22 H 1.08998 * 109.46986 * 59.99849 * 1 2 3 23 23 H 1.08996 * 109.47205 * 180.02562 * 1 2 3 24 24 H 1.09001 * 109.46951 * 300.00283 * 1 2 3 25 25 H 1.08998 * 109.47268 * 240.00127 * 2 1 3 26 26 H 1.08996 * 109.47286 * 119.99709 * 2 1 3 27 27 H 1.09004 * 109.46838 * 299.99626 * 3 2 1 28 28 H 1.08998 * 109.47105 * 60.00027 * 3 2 1 29 29 H 0.97003 * 120.00042 * 179.97438 * 8 7 5 30 30 H 1.08994 * 109.47416 * 209.99958 * 13 4 3 31 31 H 1.09000 * 109.47110 * 330.00050 * 13 4 3 32 32 H 1.09004 * 109.47073 * 0.02956 * 19 18 16 33 33 H 1.09002 * 109.47189 * 120.02468 * 19 18 16 34 34 H 1.08995 * 109.47400 * 240.02595 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 7 3.5049 1.4426 -0.0006 5 6 4.1901 1.4090 1.1846 6 1 3.7876 1.9052 2.0553 7 6 5.4020 0.7370 1.2669 8 7 5.6797 -0.2261 0.4140 9 14 6.6388 1.2000 2.5881 10 1 6.3146 0.4777 3.8444 11 1 8.0045 0.8263 2.1405 12 1 6.5803 2.6640 2.8297 13 6 4.2370 1.4785 -1.2691 14 6 4.4880 2.9110 -1.6638 15 7 4.1138 3.9633 -0.9841 16 6 4.5001 5.0822 -1.6216 17 8 4.3028 6.2229 -1.2452 18 7 5.1458 4.7213 -2.7508 19 6 5.7362 5.6157 -3.7496 20 7 5.1417 3.3168 -2.7750 21 1 5.5308 2.7483 -3.4579 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 1.8934 -0.5138 -0.8900 26 1 1.8934 -0.5138 0.8900 27 1 1.6766 1.9563 -0.8901 28 1 1.6766 1.9563 0.8900 29 1 6.5267 -0.6954 0.4713 30 1 5.1894 0.9612 -1.1537 31 1 3.6477 0.9864 -2.0428 32 1 5.5794 6.6513 -3.4479 33 1 6.8053 5.4180 -3.8276 34 1 5.2635 5.4434 -4.7164 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000347496474.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:23:59 Heat of formation + Delta-G solvation = 76.450890 kcal Electronic energy + Delta-G solvation = -17649.768606 eV Core-core repulsion = 14814.322164 eV Total energy + Delta-G solvation = -2835.446442 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 240.133 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -41.50533 -36.85579 -36.09051 -33.67760 -32.84600 -30.95205 -30.69365 -27.97966 -25.65992 -25.55468 -22.42521 -21.09601 -20.60426 -19.86470 -17.88960 -16.89839 -16.02404 -15.47340 -14.94861 -14.85619 -14.28806 -13.92528 -13.39183 -13.28409 -13.09254 -12.71897 -12.51762 -12.29004 -11.56883 -11.41234 -11.01953 -10.76130 -10.70129 -10.60739 -10.37059 -10.21670 -9.99565 -9.69064 -9.29729 -9.09805 -8.60318 -7.96444 -6.81992 -5.96764 -3.42467 1.88161 2.15980 3.34774 3.42210 3.53289 4.16465 4.22658 4.45728 5.04113 5.08499 5.18577 5.23148 5.37829 5.50708 5.75967 5.85036 5.96268 6.11817 6.24589 6.30325 6.40959 6.52836 6.60524 6.66755 6.69679 7.03261 7.06647 7.28280 7.71880 7.79010 8.34329 8.72703 8.85702 9.03641 9.64873 10.18433 11.07128 Molecular weight = 240.13amu Principal moments of inertia in cm(-1) A = 0.016721 B = 0.009616 C = 0.007172 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1674.170389 B = 2911.151410 C = 3903.222927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.139 4.139 3 C 0.152 3.848 4 N -0.550 5.550 5 C -0.235 4.235 6 H 0.068 0.932 7 C 0.006 3.994 8 N -0.893 5.893 9 Si 0.896 3.104 10 H -0.283 1.283 11 H -0.290 1.290 12 H -0.276 1.276 13 C 0.192 3.808 14 C 0.393 3.607 15 N -0.555 5.555 16 C 0.630 3.370 17 O -0.562 6.562 18 N -0.464 5.464 19 C 0.111 3.889 20 N -0.516 5.516 21 H 0.436 0.564 22 H 0.044 0.956 23 H 0.043 0.957 24 H 0.048 0.952 25 H 0.051 0.949 26 H 0.066 0.934 27 H 0.036 0.964 28 H 0.049 0.951 29 H 0.257 0.743 30 H 0.138 0.862 31 H 0.071 0.929 32 H 0.100 0.900 33 H 0.063 0.937 34 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.209 0.557 -9.910 9.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.179 4.179 3 C 0.027 3.973 4 N -0.265 5.265 5 C -0.365 4.365 6 H 0.085 0.915 7 C -0.193 4.193 8 N -0.537 5.537 9 Si 0.725 3.275 10 H -0.210 1.210 11 H -0.216 1.216 12 H -0.202 1.202 13 C 0.059 3.941 14 C 0.119 3.881 15 N -0.303 5.303 16 C 0.330 3.670 17 O -0.436 6.436 18 N -0.294 5.294 19 C -0.031 4.031 20 N -0.248 5.248 21 H 0.282 0.718 22 H 0.063 0.937 23 H 0.062 0.938 24 H 0.067 0.933 25 H 0.070 0.930 26 H 0.084 0.916 27 H 0.055 0.945 28 H 0.068 0.932 29 H 0.067 0.933 30 H 0.154 0.846 31 H 0.089 0.911 32 H 0.118 0.882 33 H 0.081 0.919 34 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges -1.566 1.564 -9.017 9.284 hybrid contribution 1.568 0.093 -0.636 1.694 sum 0.002 1.657 -9.653 9.794 Atomic orbital electron populations 1.21748 0.97617 1.00345 1.00874 1.22061 0.93212 1.00379 1.02246 1.20957 0.83739 0.93367 0.99282 1.43456 1.00027 1.81707 1.01336 1.19113 1.02572 1.25704 0.89096 0.91459 1.25017 1.00506 0.95268 0.98500 1.69884 1.23933 1.20578 1.39340 0.86403 0.80518 0.79052 0.81540 1.21001 1.21597 1.20179 1.20265 1.02744 0.82419 0.88683 1.27587 0.81319 1.00840 0.78383 1.72010 1.32287 0.96554 1.29480 1.18775 0.79456 0.90240 0.78574 1.90858 1.62981 1.19765 1.70022 1.49531 1.58712 0.94765 1.26424 1.21665 0.97623 0.93642 0.90207 1.45499 1.57370 0.95768 1.26124 0.71780 0.93668 0.93812 0.93268 0.92992 0.91572 0.94522 0.93248 0.93333 0.84594 0.91136 0.88155 0.91852 0.91883 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.15 9.91 37.16 0.37 -1.79 16 2 C -0.14 -2.51 6.26 -26.73 -0.17 -2.67 16 3 C 0.15 3.05 5.67 -4.04 -0.02 3.03 16 4 N -0.55 -12.58 2.15 -174.61 -0.38 -12.95 16 5 C -0.24 -6.10 9.49 -15.06 -0.14 -6.24 16 6 H 0.07 1.82 7.93 -52.49 -0.42 1.40 16 7 C 0.01 0.15 4.94 -17.43 -0.09 0.06 16 8 N -0.89 -23.01 11.34 55.49 0.63 -22.38 16 9 Si 0.90 21.25 29.61 -169.99 -5.03 16.22 16 10 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 11 H -0.29 -6.84 7.11 56.52 0.40 -6.44 16 12 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 13 C 0.19 3.85 5.91 -5.19 -0.03 3.82 16 14 C 0.39 7.77 8.02 -155.12 -1.24 6.53 16 15 N -0.56 -13.16 10.83 -13.82 -0.15 -13.31 16 16 C 0.63 14.44 8.97 -87.01 -0.78 13.66 16 17 O -0.56 -14.45 17.69 5.16 0.09 -14.36 16 18 N -0.46 -8.02 4.06 -72.07 -0.29 -8.31 16 19 C 0.11 1.31 11.57 59.85 0.69 2.00 16 20 N -0.52 -8.00 7.36 32.73 0.24 -7.76 16 21 H 0.44 4.73 8.96 -182.31 -1.63 3.09 16 22 H 0.04 0.61 8.14 -51.93 -0.42 0.18 16 23 H 0.04 0.58 8.14 -51.93 -0.42 0.16 16 24 H 0.05 0.70 8.14 -51.93 -0.42 0.27 16 25 H 0.05 0.93 8.14 -51.93 -0.42 0.51 16 26 H 0.07 1.34 8.14 -51.93 -0.42 0.91 16 27 H 0.04 0.69 8.06 -51.93 -0.42 0.27 16 28 H 0.05 1.03 8.05 -51.93 -0.42 0.61 16 29 H 0.26 6.44 8.31 -40.82 -0.34 6.10 16 30 H 0.14 2.99 5.33 -51.93 -0.28 2.72 16 31 H 0.07 1.20 8.07 -51.93 -0.42 0.79 16 32 H 0.10 1.23 7.80 -51.93 -0.41 0.83 16 33 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 34 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 LS Contribution 294.61 15.07 4.44 4.44 Total: -1.00 -33.03 294.61 -7.95 -40.97 By element: Atomic # 1 Polarization: 5.12 SS G_CDS: -6.08 Total: -0.96 kcal Atomic # 6 Polarization: 19.81 SS G_CDS: -1.41 Total: 18.40 kcal Atomic # 7 Polarization: -64.76 SS G_CDS: 0.05 Total: -64.71 kcal Atomic # 8 Polarization: -14.45 SS G_CDS: 0.09 Total: -14.36 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.03 Total: 16.22 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -33.03 -7.95 -40.97 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000347496474.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.425 kcal (2) G-P(sol) polarization free energy of solvation -33.028 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 84.397 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.974 kcal (6) G-S(sol) free energy of system = (1) + (5) 76.451 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds