Wall clock time and date at job start Sun Mar 29 2020 23:19:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46504 * 1 3 3 C 1.34601 * 126.49285 * 2 1 4 4 Cl 1.73599 * 125.43218 * 359.97438 * 3 2 1 5 5 N 1.31018 * 109.12932 * 179.97438 * 3 2 1 6 6 C 1.33303 * 109.70577 * 359.97438 * 5 3 2 7 7 C 1.36671 * 107.82832 * 359.97438 * 6 5 3 8 8 C 1.46665 * 126.83903 * 179.97438 * 7 6 5 9 9 O 1.21692 * 119.99981 * 174.46886 * 8 7 6 10 10 N 1.34775 * 120.00134 * 354.47262 * 8 7 6 11 11 C 1.46496 * 120.00147 * 185.12215 * 10 8 7 12 12 C 1.50703 * 109.47263 * 179.97438 * 11 10 8 13 13 H 1.08002 * 120.00027 * 0.02562 * 12 11 10 14 14 C 1.37877 * 120.00017 * 179.97438 * 12 11 10 15 15 N 1.31514 * 120.00063 * 179.97438 * 14 12 11 16 16 Si 1.86801 * 120.00175 * 0.02562 * 14 12 11 17 17 H 1.48495 * 109.47236 * 89.99133 * 16 14 12 18 18 H 1.48499 * 109.47062 * 209.99809 * 16 14 12 19 19 H 1.48501 * 109.46809 * 329.99575 * 16 14 12 20 20 H 1.09001 * 109.46978 * 274.32121 * 1 2 3 21 21 H 1.08999 * 109.46769 * 34.32322 * 1 2 3 22 22 H 1.08996 * 109.46832 * 154.32171 * 1 2 3 23 23 H 1.08000 * 126.08323 * 180.26000 * 6 5 3 24 24 H 0.97005 * 119.99832 * 5.11923 * 10 8 7 25 25 H 1.08999 * 109.47359 * 299.99718 * 11 10 8 26 26 H 1.08999 * 109.47226 * 60.00080 * 11 10 8 27 27 H 0.96996 * 120.00523 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2655 1.0821 0.0000 4 17 1.7269 2.7324 -0.0006 5 7 3.5160 0.6911 0.0006 6 6 3.5705 -0.6408 0.0015 7 6 2.2876 -1.1121 0.0021 8 6 1.8669 -2.5171 0.0027 9 8 0.6875 -2.7991 0.1048 10 7 2.7865 -3.4959 -0.1098 11 6 2.3595 -4.8928 -0.2222 12 6 3.5716 -5.7811 -0.3354 13 1 4.5611 -5.3485 -0.3242 14 6 3.4174 -7.1462 -0.4521 15 7 4.4751 -7.9214 -0.5514 16 14 1.7059 -7.8947 -0.4707 17 1 1.2134 -7.9692 -1.8696 18 1 1.7567 -9.2605 0.1098 19 1 0.7872 -7.0490 0.3331 20 1 -0.3633 0.0774 1.0248 21 1 -0.3633 0.8487 -0.5795 22 1 -0.3633 -0.9262 -0.4453 23 1 4.4686 -1.2407 0.0061 24 1 3.7311 -3.2755 -0.1164 25 1 1.7868 -5.1700 0.6628 26 1 1.7378 -5.0124 -1.1095 27 1 4.3667 -8.8818 -0.6339 RHF calculation, no. of doubly occupied orbitals= 41 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000696474491.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:19:32 Heat of formation + Delta-G solvation = 18.575237 kcal Electronic energy + Delta-G solvation = -14825.755105 eV Core-core repulsion = 12031.811821 eV Total energy + Delta-G solvation = -2793.943284 eV No. of doubly occupied orbitals = 41 Molecular weight (most abundant/longest-lived isotopes) = 243.052 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -42.30833 -38.78145 -37.20263 -34.83170 -34.01196 -32.48932 -30.23099 -27.72429 -27.27292 -23.55603 -22.01780 -21.16554 -19.95731 -18.20736 -16.95071 -16.33586 -16.00951 -15.55222 -14.65502 -14.50906 -14.36421 -13.88018 -13.34215 -13.13550 -12.88071 -12.46318 -12.37868 -11.96318 -11.82353 -11.11772 -10.84829 -10.47252 -10.04141 -9.95682 -9.63755 -9.53718 -8.87104 -8.69264 -8.27884 -6.26841 -4.30267 1.03356 1.20223 2.57724 2.61308 3.21851 3.29225 3.35765 3.53771 3.76518 4.27504 4.57990 4.63038 5.03384 5.07193 5.08073 5.27964 5.41677 5.86755 6.27705 6.55626 6.67647 6.94760 7.00161 7.26232 7.53707 7.98923 8.35613 8.58156 8.74045 9.31534 10.84874 Molecular weight = 243.05amu Principal moments of inertia in cm(-1) A = 0.056753 B = 0.004939 C = 0.004565 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 493.246889 B = 5667.320080 C = 6132.542555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.414 5.414 3 C 0.250 3.750 4 Cl 0.035 6.965 5 N -0.468 5.468 6 C 0.042 3.958 7 C -0.053 4.053 8 C 0.579 3.421 9 O -0.558 6.558 10 N -0.684 5.684 11 C 0.223 3.777 12 C -0.547 4.547 13 H 0.082 0.918 14 C 0.079 3.921 15 N -0.889 5.889 16 Si 0.876 3.124 17 H -0.273 1.273 18 H -0.283 1.283 19 H -0.261 1.261 20 H 0.085 0.915 21 H 0.086 0.914 22 H 0.114 0.886 23 H 0.192 0.808 24 H 0.401 0.599 25 H 0.030 0.970 26 H 0.024 0.976 27 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.421 17.156 0.845 18.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.098 5.098 3 C -0.036 4.036 4 Cl 0.062 6.938 5 N -0.190 5.190 6 C -0.112 4.112 7 C -0.171 4.171 8 C 0.363 3.637 9 O -0.439 6.439 10 N -0.332 5.332 11 C 0.101 3.899 12 C -0.585 4.585 13 H 0.100 0.900 14 C -0.125 4.125 15 N -0.526 5.526 16 Si 0.702 3.298 17 H -0.198 1.198 18 H -0.208 1.208 19 H -0.185 1.185 20 H 0.103 0.897 21 H 0.105 0.895 22 H 0.132 0.868 23 H 0.209 0.791 24 H 0.236 0.764 25 H 0.048 0.952 26 H 0.042 0.958 27 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -6.770 17.386 0.876 18.678 hybrid contribution -1.109 -0.663 -0.037 1.293 sum -7.879 16.723 0.839 18.505 Atomic orbital electron populations 1.22405 0.74704 1.06254 1.04576 1.45027 1.08519 1.04485 1.51787 1.23133 0.86770 0.84219 1.09490 1.98411 1.88765 1.09390 1.97192 1.70028 1.16065 1.12821 1.20061 1.22741 0.95955 0.89811 1.02665 1.21158 0.90910 0.88985 1.15997 1.16730 0.86195 0.82647 0.78118 1.90749 1.17168 1.83845 1.52131 1.45911 1.09090 1.07659 1.70539 1.19598 0.97087 0.76164 0.97013 1.21049 0.92774 0.91427 1.53217 0.89972 1.24776 0.97138 0.96765 0.93814 1.69868 1.29152 1.05024 1.48532 0.86832 0.84700 0.79036 0.79208 1.19820 1.20815 1.18498 0.89653 0.89522 0.86775 0.79097 0.76428 0.95182 0.95810 0.92145 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.68 10.53 59.85 0.63 1.31 15 2 N -0.41 -5.79 3.18 -118.36 -0.38 -6.16 15 3 C 0.25 3.42 8.48 -90.34 -0.77 2.65 15 4 Cl 0.03 0.36 28.83 -51.86 -1.50 -1.13 15 5 N -0.47 -7.04 11.21 -11.49 -0.13 -7.17 15 6 C 0.04 0.61 11.37 -17.48 -0.20 0.41 15 7 C -0.05 -0.84 6.91 -82.10 -0.57 -1.40 15 8 C 0.58 10.77 7.77 -12.86 -0.10 10.67 15 9 O -0.56 -11.72 14.87 5.20 0.08 -11.65 15 10 N -0.68 -13.23 5.53 -62.81 -0.35 -13.58 15 11 C 0.22 5.20 4.50 -5.19 -0.02 5.18 15 12 C -0.55 -14.41 9.83 -34.44 -0.34 -14.75 15 13 H 0.08 2.25 7.84 -52.49 -0.41 1.84 15 14 C 0.08 2.17 5.47 -17.82 -0.10 2.08 15 15 N -0.89 -25.73 13.96 55.43 0.77 -24.96 15 16 Si 0.88 20.68 27.47 -169.99 -4.67 16.01 15 17 H -0.27 -6.35 7.11 56.52 0.40 -5.94 15 18 H -0.28 -6.58 7.11 56.52 0.40 -6.18 15 19 H -0.26 -6.07 6.54 56.52 0.37 -5.70 15 20 H 0.08 0.83 8.14 -51.93 -0.42 0.40 15 21 H 0.09 0.70 7.92 -51.93 -0.41 0.29 15 22 H 0.11 1.44 6.39 -51.93 -0.33 1.11 15 23 H 0.19 2.22 7.46 -52.49 -0.39 1.83 15 24 H 0.40 6.76 7.26 -40.82 -0.30 6.47 15 25 H 0.03 0.74 7.20 -51.93 -0.37 0.37 15 26 H 0.02 0.57 7.57 -51.93 -0.39 0.18 15 27 H 0.27 7.28 8.31 -40.82 -0.34 6.94 15 LS Contribution 258.77 15.07 3.90 3.90 Total: -1.00 -31.07 258.77 -5.93 -37.00 By element: Atomic # 1 Polarization: 3.81 SS G_CDS: -2.20 Total: 1.61 kcal Atomic # 6 Polarization: 7.60 SS G_CDS: -1.46 Total: 6.14 kcal Atomic # 7 Polarization: -51.80 SS G_CDS: -0.08 Total: -51.88 kcal Atomic # 8 Polarization: -11.72 SS G_CDS: 0.08 Total: -11.65 kcal Atomic # 14 Polarization: 20.68 SS G_CDS: -4.67 Total: 16.01 kcal Atomic # 17 Polarization: 0.36 SS G_CDS: -1.50 Total: -1.13 kcal Total LS contribution 3.90 Total: 3.90 kcal Total: -31.07 -5.93 -37.00 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000696474491.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.574 kcal (2) G-P(sol) polarization free energy of solvation -31.072 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.503 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.927 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.999 kcal (6) G-S(sol) free energy of system = (1) + (5) 18.575 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds