Wall clock time and date at job start Sun Mar 29 2020 23:42:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35925 * 117.00228 * 2 1 4 4 C 1.38573 * 120.08733 * 0.02562 * 3 2 1 5 5 C 1.38227 * 120.02157 * 179.97438 * 4 3 2 6 6 C 1.38349 * 120.20825 * 0.02877 * 5 4 3 7 7 C 1.38116 * 120.18759 * 359.97438 * 6 5 4 8 8 C 1.38882 * 119.97221 * 359.68671 * 7 6 5 9 9 N 1.39771 * 120.10444 * 180.31972 * 8 7 6 10 10 C 1.36832 * 120.00059 * 270.29834 * 9 8 7 11 11 H 1.07995 * 120.00038 * 180.02562 * 10 9 8 12 12 C 1.38936 * 119.99569 * 359.97438 * 10 9 8 13 13 N 1.31388 * 120.00466 * 0.02562 * 12 10 9 14 14 Si 1.86804 * 119.99631 * 180.02562 * 12 10 9 15 15 H 1.48496 * 109.47134 * 60.00365 * 14 12 10 16 16 H 1.48503 * 109.47062 * 180.02562 * 14 12 10 17 17 H 1.48500 * 109.47106 * 300.00474 * 14 12 10 18 18 C 1.36393 * 120.00263 * 90.29345 * 9 8 7 19 19 N 1.30980 * 120.00342 * 179.97438 * 18 9 8 20 20 C 1.35500 * 120.00078 * 179.97438 * 19 18 9 21 21 N 6.20855 * 136.89595 * 127.51573 * 2 1 3 22 22 H 1.09002 * 109.47220 * 299.99824 * 1 2 3 23 23 H 1.08996 * 109.47672 * 59.99767 * 1 2 3 24 24 H 1.09006 * 109.47331 * 179.97438 * 1 2 3 25 25 H 1.07992 * 119.99321 * 359.97438 * 4 3 2 26 26 H 1.08000 * 119.89588 * 180.02562 * 5 4 3 27 27 H 1.07997 * 119.90399 * 179.97438 * 6 5 4 28 28 H 1.08003 * 120.01180 * 179.97438 * 7 6 5 29 29 H 0.96995 * 120.00424 * 180.02562 * 13 12 10 30 30 H 1.08004 * 119.99570 * 0.02562 * 18 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2111 0.0000 4 6 1.2931 2.3744 0.0005 5 6 1.9221 3.6053 0.0011 6 6 3.3036 3.6811 0.0005 7 6 4.0624 2.5271 -0.0001 8 6 3.4384 1.2863 0.0064 9 7 4.2037 0.1168 0.0126 10 6 4.5834 -0.4586 -1.1694 11 1 5.1743 -1.3626 -1.1646 12 6 4.2078 0.1195 -2.3756 13 7 3.4884 1.2189 -2.3814 14 14 4.7255 -0.6664 -3.9892 15 1 4.1786 -2.0448 -4.0664 16 1 4.2022 0.1384 -5.1222 17 1 6.2079 -0.7172 -4.0618 18 6 4.5720 -0.4510 1.1968 19 7 5.2887 -1.5473 1.2025 20 6 5.6551 -2.1110 2.3790 21 7 5.9619 -2.5836 3.3651 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5138 -0.8899 24 1 -0.3634 -1.0277 -0.0005 25 1 0.2146 2.3195 0.0005 26 1 1.3334 4.5107 0.0019 27 1 3.7899 4.6453 0.0005 28 1 5.1406 2.5895 -0.0010 29 1 3.2258 1.6224 -3.2235 30 1 4.2720 0.0030 2.1297 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000005073818.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:42:30 Heat of formation + Delta-G solvation = 66.477725 kcal Electronic energy + Delta-G solvation = -17360.675193 eV Core-core repulsion = 14543.930488 eV Total energy + Delta-G solvation = -2816.744705 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 245.090 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.84305 -37.66559 -36.37513 -35.26847 -33.00327 -31.65749 -29.59366 -29.01851 -26.78255 -25.53277 -22.84156 -21.50112 -20.72829 -18.87427 -17.42430 -16.45423 -15.88037 -15.59955 -15.14448 -14.96159 -14.23622 -13.93237 -13.55825 -13.45619 -12.92525 -12.54867 -12.13114 -11.83460 -11.70153 -11.58972 -11.53882 -11.13062 -10.94477 -10.59071 -10.55723 -10.48643 -10.29850 -9.16950 -8.28915 -8.24969 -7.66680 -7.56839 -6.35555 -4.09350 2.01100 2.16206 2.54224 3.11985 3.14805 3.17631 3.71422 3.87447 4.03760 4.38746 4.47774 4.75175 5.09405 5.31341 5.36889 5.46033 5.49450 5.56126 5.72458 5.78229 5.96917 6.08629 6.28667 6.53600 6.87727 7.01486 7.15177 7.24333 7.41843 7.56446 7.96878 8.07876 8.56403 8.92597 9.14654 9.85246 10.33429 Molecular weight = 245.09amu Principal moments of inertia in cm(-1) A = 0.014389 B = 0.011372 C = 0.008355 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1945.518548 B = 2461.634418 C = 3350.542880 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.302 6.302 3 C 0.149 3.851 4 C -0.206 4.206 5 C -0.097 4.097 6 C -0.150 4.150 7 C -0.060 4.060 8 C 0.190 3.810 9 N -0.332 5.332 10 C -0.295 4.295 11 H 0.127 0.873 12 C 0.036 3.964 13 N -0.847 5.847 14 Si 0.938 3.062 15 H -0.269 1.269 16 H -0.283 1.283 17 H -0.268 1.268 18 C 0.347 3.653 19 N -0.584 5.584 20 C 0.396 3.604 21 N -0.548 5.548 22 H 0.046 0.954 23 H 0.049 0.951 24 H 0.091 0.909 25 H 0.116 0.884 26 H 0.110 0.890 27 H 0.112 0.888 28 H 0.119 0.881 29 H 0.275 0.725 30 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.506 7.524 -1.074 10.682 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.214 6.214 3 C 0.102 3.898 4 C -0.226 4.226 5 C -0.115 4.115 6 C -0.169 4.169 7 C -0.080 4.080 8 C 0.097 3.903 9 N -0.017 5.017 10 C -0.424 4.424 11 H 0.145 0.855 12 C -0.173 4.173 13 N -0.482 5.482 14 Si 0.764 3.236 15 H -0.194 1.194 16 H -0.208 1.208 17 H -0.193 1.193 18 C 0.060 3.940 19 N -0.336 5.336 20 C -0.008 4.008 21 N -0.249 5.249 22 H 0.065 0.935 23 H 0.068 0.932 24 H 0.109 0.891 25 H 0.134 0.866 26 H 0.128 0.872 27 H 0.130 0.870 28 H 0.137 0.863 29 H 0.087 0.913 30 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -6.860 6.450 -0.570 9.433 hybrid contribution -0.554 0.459 -0.996 1.229 sum -7.414 6.909 -1.566 10.255 Atomic orbital electron populations 1.22911 0.79986 1.03033 1.00445 1.86201 1.19843 1.26906 1.88484 1.18957 0.91149 0.83994 0.95696 1.20801 0.98754 0.92273 1.10769 1.20610 0.94472 0.96130 1.00321 1.20601 0.93622 0.97230 1.05454 1.20755 0.99259 0.90573 0.97406 1.16461 0.86308 0.85932 1.01570 1.39685 1.39477 1.18312 1.04261 1.20262 1.31419 1.10107 0.80613 0.85504 1.25506 0.95570 0.95745 1.00433 1.69918 1.32840 1.17413 1.27980 0.85773 0.79365 0.79124 0.79341 1.19391 1.20825 1.19343 1.22249 0.93113 0.90896 0.87708 1.67935 1.34373 1.18282 1.13013 1.26311 0.92722 0.94080 0.87646 1.81519 1.18850 1.17024 1.07544 0.93515 0.93228 0.89072 0.86642 0.87177 0.86992 0.86350 0.91273 0.87377 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.45 9.81 101.05 0.99 1.44 16 2 O -0.30 -5.96 10.24 -19.50 -0.20 -6.16 16 3 C 0.15 2.92 5.80 -39.01 -0.23 2.70 16 4 C -0.21 -3.43 9.03 -39.46 -0.36 -3.79 16 5 C -0.10 -1.49 10.04 -39.54 -0.40 -1.89 16 6 C -0.15 -2.43 10.04 -39.59 -0.40 -2.82 16 7 C -0.06 -1.13 9.04 -39.39 -0.36 -1.49 16 8 C 0.19 3.95 2.83 -83.55 -0.24 3.71 16 9 N -0.33 -7.54 2.44 -60.71 -0.15 -7.69 16 10 C -0.29 -7.17 9.55 -15.06 -0.14 -7.32 16 11 H 0.13 3.22 7.06 -52.49 -0.37 2.85 16 12 C 0.04 0.83 5.45 -17.48 -0.10 0.73 16 13 N -0.85 -19.59 9.30 55.49 0.52 -19.07 16 14 Si 0.94 18.95 29.55 -169.99 -5.02 13.93 16 15 H -0.27 -5.52 7.11 56.52 0.40 -5.12 16 16 H -0.28 -5.64 7.11 56.52 0.40 -5.24 16 17 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 18 C 0.35 7.59 10.74 -88.73 -0.95 6.64 16 19 N -0.58 -13.84 9.24 17.89 0.17 -13.68 16 20 C 0.40 9.37 16.49 -102.21 -1.69 7.68 16 21 N -0.55 -13.20 18.54 41.26 0.76 -12.43 16 22 H 0.05 0.56 7.66 -51.93 -0.40 0.16 16 23 H 0.05 0.66 7.66 -51.93 -0.40 0.26 16 24 H 0.09 1.11 8.14 -51.93 -0.42 0.69 16 25 H 0.12 1.62 6.30 -52.49 -0.33 1.29 16 26 H 0.11 1.37 8.06 -52.49 -0.42 0.94 16 27 H 0.11 1.51 8.06 -52.49 -0.42 1.09 16 28 H 0.12 2.19 8.06 -52.48 -0.42 1.77 16 29 H 0.28 6.21 8.31 -40.82 -0.34 5.87 16 30 H 0.11 2.09 8.02 -52.48 -0.42 1.67 16 LS Contribution 276.77 15.07 4.17 4.17 Total: -1.00 -27.79 276.77 -6.35 -34.14 By element: Atomic # 1 Polarization: 3.93 SS G_CDS: -2.74 Total: 1.19 kcal Atomic # 6 Polarization: 9.45 SS G_CDS: -3.86 Total: 5.60 kcal Atomic # 7 Polarization: -54.17 SS G_CDS: 1.30 Total: -52.87 kcal Atomic # 8 Polarization: -5.96 SS G_CDS: -0.20 Total: -6.16 kcal Atomic # 14 Polarization: 18.95 SS G_CDS: -5.02 Total: 13.93 kcal Total LS contribution 4.17 Total: 4.17 kcal Total: -27.79 -6.35 -34.14 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000005073818.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.618 kcal (2) G-P(sol) polarization free energy of solvation -27.787 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.354 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.141 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.478 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds