Wall clock time and date at job start Sun Mar 29 2020 23:38:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.36023 * 126.34360 * 2 1 4 4 N 1.30114 * 110.12727 * 179.71433 * 3 2 1 5 5 C 1.35800 * 109.62810 * 0.41667 * 4 3 2 6 6 C 1.39652 * 133.56873 * 179.88829 * 5 4 3 7 7 C 1.38468 * 119.55513 * 179.68276 * 6 5 4 8 8 N 1.39584 * 119.82963 * 179.97438 * 7 6 5 9 9 C 1.34781 * 120.00160 * 33.61127 * 8 7 6 10 10 O 1.21759 * 120.00063 * 5.27552 * 9 8 7 11 11 C 1.41822 * 119.99767 * 185.27521 * 9 8 7 12 12 H 1.07998 * 120.00333 * 0.02562 * 11 9 8 13 13 C 1.40136 * 120.00071 * 179.97438 * 11 9 8 14 14 N 1.30630 * 119.99600 * 0.02562 * 13 11 9 15 15 Si 1.86795 * 120.00284 * 180.02562 * 13 11 9 16 16 H 1.48494 * 109.47503 * 59.99839 * 15 13 11 17 17 H 1.48502 * 109.47176 * 180.02562 * 15 13 11 18 18 H 1.48502 * 109.46891 * 299.99764 * 15 13 11 19 19 C 1.39530 * 120.33512 * 359.97224 * 7 6 5 20 20 C 1.36658 * 120.52395 * 0.02591 * 19 7 6 21 21 C 1.38133 * 126.33877 * 179.97438 * 2 1 3 22 22 H 1.09005 * 109.47026 * 270.04094 * 1 2 3 23 23 H 1.08997 * 109.47536 * 30.04026 * 1 2 3 24 24 H 1.09003 * 109.47139 * 150.03865 * 1 2 3 25 25 H 1.08008 * 124.93981 * 359.96446 * 3 2 1 26 26 H 1.07999 * 120.22485 * 359.65553 * 6 5 4 27 27 H 0.97007 * 119.99979 * 213.61033 * 8 7 6 28 28 H 0.97002 * 120.00078 * 179.97438 * 14 13 11 29 29 H 1.07997 * 119.74130 * 180.02562 * 19 7 6 30 30 H 1.07998 * 119.97235 * 179.97438 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2711 1.0956 0.0000 4 7 3.5204 0.7323 0.0061 5 6 3.6013 -0.6233 0.0011 6 6 4.6686 -1.5239 0.0020 7 6 4.4139 -2.8849 0.0023 8 7 5.4764 -3.7902 0.0026 9 6 6.6198 -3.4871 0.6487 10 8 6.6928 -2.4685 1.3117 11 6 7.7378 -4.3548 0.5564 12 1 7.6732 -5.2581 -0.0320 13 6 8.9268 -4.0395 1.2277 14 7 9.0051 -2.9467 1.9390 15 14 10.3996 -5.1820 1.1056 16 1 10.8124 -5.3073 -0.3153 17 1 11.5240 -4.6269 1.9011 18 1 10.0330 -6.5203 1.6344 19 6 3.1006 -3.3561 0.0023 20 6 2.0497 -2.4824 0.0015 21 6 2.2835 -1.1127 0.0005 22 1 -0.3633 0.0007 1.0277 23 1 -0.3634 0.8896 -0.5144 24 1 -0.3633 -0.8903 -0.5132 25 1 1.9245 2.1186 -0.0005 26 1 5.6859 -1.1612 0.0020 27 1 5.3919 -4.6374 -0.4623 28 1 9.8279 -2.7285 2.4041 29 1 2.9129 -4.4196 0.0030 30 1 1.0367 -2.8568 0.0011 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000258762607.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:38:22 Heat of formation + Delta-G solvation = 43.719916 kcal Electronic energy + Delta-G solvation = -16741.487282 eV Core-core repulsion = 13923.755724 eV Total energy + Delta-G solvation = -2817.731558 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 245.090 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -41.62473 -38.44117 -36.09952 -33.91432 -33.06714 -32.20460 -29.45918 -28.49054 -26.94117 -25.97790 -22.95292 -21.65328 -20.28829 -19.79080 -17.64937 -16.84505 -16.55539 -15.62160 -15.50190 -15.29191 -14.24014 -13.82258 -13.58148 -13.44477 -13.04600 -12.82181 -12.54222 -12.42714 -12.00079 -11.30744 -11.28310 -11.06576 -10.92737 -10.53899 -10.32294 -9.97897 -9.51365 -9.03870 -8.63840 -7.78993 -7.57616 -6.75775 -6.29299 -4.82540 1.49578 2.12632 2.90018 3.11585 3.16834 3.18838 3.22518 4.03482 4.34513 4.56547 4.62457 4.68594 4.85450 4.91900 5.05885 5.26138 5.44894 5.76711 5.79643 5.93932 5.98870 6.20083 6.58121 6.81554 7.09026 7.20450 7.24803 7.31605 7.50869 7.95157 8.11676 8.25287 8.36343 8.87490 9.38803 10.46965 10.68364 Molecular weight = 245.09amu Principal moments of inertia in cm(-1) A = 0.054095 B = 0.005173 C = 0.004808 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 517.481397 B = 5411.244325 C = 5822.633109 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.086 3.914 2 N -0.504 5.504 3 C 0.244 3.756 4 N -0.494 5.494 5 C 0.068 3.932 6 C -0.080 4.080 7 C 0.176 3.824 8 N -0.701 5.701 9 C 0.543 3.457 10 O -0.564 6.564 11 C -0.540 4.540 12 H 0.069 0.931 13 C 0.088 3.912 14 N -0.748 5.748 15 Si 0.912 3.088 16 H -0.266 1.266 17 H -0.279 1.279 18 H -0.267 1.267 19 C -0.134 4.134 20 C -0.102 4.102 21 C 0.010 3.990 22 H 0.068 0.932 23 H 0.082 0.918 24 H 0.078 0.922 25 H 0.206 0.794 26 H 0.145 0.855 27 H 0.391 0.609 28 H 0.273 0.727 29 H 0.125 0.875 30 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.957 1.689 -4.727 15.777 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.197 5.197 3 C -0.042 4.042 4 N -0.214 5.214 5 C -0.049 4.049 6 C -0.104 4.104 7 C 0.075 3.925 8 N -0.346 5.346 9 C 0.352 3.648 10 O -0.447 6.447 11 C -0.575 4.575 12 H 0.087 0.913 13 C -0.135 4.135 14 N -0.375 5.375 15 Si 0.737 3.263 16 H -0.191 1.191 17 H -0.204 1.204 18 H -0.191 1.191 19 C -0.156 4.156 20 C -0.124 4.124 21 C -0.097 4.097 22 H 0.086 0.914 23 H 0.100 0.900 24 H 0.097 0.903 25 H 0.223 0.777 26 H 0.163 0.837 27 H 0.225 0.775 28 H 0.084 0.916 29 H 0.143 0.857 30 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -14.096 3.020 -4.102 14.988 hybrid contribution -0.224 -1.439 -0.190 1.469 sum -14.320 1.581 -4.292 15.033 Atomic orbital electron populations 1.21817 0.77122 1.03931 1.02812 1.45105 1.06516 1.05690 1.62417 1.25182 0.85483 0.93033 1.00505 1.70414 1.17870 1.11712 1.21377 1.18876 0.91773 0.89695 1.04607 1.20387 0.98645 0.90060 1.01276 1.17532 0.87686 0.89772 0.97472 1.44120 1.14474 1.19498 1.56476 1.17079 0.81054 0.87383 0.79301 1.90678 1.81919 1.28555 1.43523 1.20015 0.96428 1.08889 1.32197 0.91254 1.25756 0.99606 0.94899 0.93227 1.70009 1.26437 1.20695 1.20395 0.86352 0.80190 0.80670 0.79129 1.19078 1.20401 1.19132 1.20476 0.91060 0.99124 1.04953 1.19237 0.98564 0.88634 1.05918 1.18817 0.91106 0.89176 1.10588 0.91380 0.89954 0.90289 0.77719 0.83696 0.77534 0.91630 0.85714 0.86844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.69 11.18 59.84 0.67 1.36 16 2 N -0.50 -6.97 3.21 -123.11 -0.39 -7.36 16 3 C 0.24 3.54 12.50 -89.79 -1.12 2.42 16 4 N -0.49 -9.91 11.28 -12.05 -0.14 -10.04 16 5 C 0.07 1.46 7.23 -84.70 -0.61 0.85 16 6 C -0.08 -1.92 8.70 -38.97 -0.34 -2.26 16 7 C 0.18 3.86 6.27 -83.76 -0.53 3.34 16 8 N -0.70 -16.18 5.31 -12.42 -0.07 -16.24 16 9 C 0.54 15.46 7.30 -14.89 -0.11 15.35 16 10 O -0.56 -18.26 12.56 5.14 0.06 -18.19 16 11 C -0.54 -14.94 9.32 -37.50 -0.35 -15.29 16 12 H 0.07 1.72 7.85 -52.49 -0.41 1.31 16 13 C 0.09 2.41 5.50 -17.35 -0.10 2.31 16 14 N -0.75 -22.12 11.73 55.55 0.65 -21.47 16 15 Si 0.91 19.67 29.56 -169.99 -5.02 14.64 16 16 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 17 H -0.28 -5.89 7.11 56.52 0.40 -5.48 16 18 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 19 C -0.13 -2.35 9.89 -39.67 -0.39 -2.74 16 20 C -0.10 -1.63 9.98 -39.89 -0.40 -2.03 16 21 C 0.01 0.18 6.88 -83.88 -0.58 -0.40 16 22 H 0.07 0.48 8.14 -51.93 -0.42 0.05 16 23 H 0.08 0.43 8.14 -51.93 -0.42 0.01 16 24 H 0.08 0.56 8.14 -51.93 -0.42 0.14 16 25 H 0.21 1.86 8.06 -52.48 -0.42 1.43 16 26 H 0.15 4.01 6.41 -52.49 -0.34 3.67 16 27 H 0.39 7.58 8.77 -40.82 -0.36 7.22 16 28 H 0.27 7.30 8.29 -40.82 -0.34 6.97 16 29 H 0.12 1.81 8.06 -52.49 -0.42 1.38 16 30 H 0.11 1.39 8.06 -52.49 -0.42 0.97 16 LS Contribution 269.62 15.07 4.06 4.06 Total: -1.00 -36.91 269.62 -7.47 -44.38 By element: Atomic # 1 Polarization: 10.10 SS G_CDS: -2.78 Total: 7.32 kcal Atomic # 6 Polarization: 6.75 SS G_CDS: -3.85 Total: 2.90 kcal Atomic # 7 Polarization: -55.17 SS G_CDS: 0.06 Total: -55.12 kcal Atomic # 8 Polarization: -18.26 SS G_CDS: 0.06 Total: -18.19 kcal Atomic # 14 Polarization: 19.67 SS G_CDS: -5.02 Total: 14.64 kcal Total LS contribution 4.06 Total: 4.06 kcal Total: -36.91 -7.47 -44.38 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000258762607.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.098 kcal (2) G-P(sol) polarization free energy of solvation -36.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.189 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.470 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.378 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds