Wall clock time and date at job start Sun Mar 29 2020 23:05:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.38642 * 120.82479 * 2 1 4 4 Cl 1.73598 * 120.37195 * 359.97438 * 3 2 1 5 5 C 1.38353 * 119.25828 * 180.25732 * 3 2 1 6 6 N 1.31950 * 120.96040 * 359.79154 * 5 3 2 7 7 C 1.31816 * 121.80502 * 359.97428 * 6 5 3 8 8 Cl 1.73607 * 119.67866 * 180.02562 * 7 6 5 9 9 C 1.39268 * 120.63911 * 0.02562 * 7 6 5 10 10 N 1.39344 * 120.50657 * 179.97438 * 9 7 6 11 11 C 1.36835 * 119.99855 * 272.67123 * 10 9 7 12 12 H 1.08001 * 120.00482 * 5.81115 * 11 10 9 13 13 C 1.38793 * 120.00023 * 185.81663 * 11 10 9 14 14 N 1.31598 * 119.99716 * 0.02562 * 13 11 10 15 15 Si 1.86801 * 120.00379 * 179.97438 * 13 11 10 16 16 H 1.48499 * 109.46824 * 359.97438 * 15 13 11 17 17 H 1.48501 * 109.47119 * 119.99900 * 15 13 11 18 18 H 1.48501 * 109.47041 * 240.00134 * 15 13 11 19 19 H 1.09003 * 109.47192 * 270.20088 * 1 2 3 20 20 H 1.09002 * 109.47349 * 30.20077 * 1 2 3 21 21 H 1.09002 * 109.47439 * 150.20519 * 1 2 3 22 22 H 1.08002 * 119.52085 * 179.76798 * 5 3 2 23 23 H 0.96999 * 120.00417 * 92.93984 * 10 9 7 24 24 H 0.97005 * 119.99980 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2174 1.1906 0.0000 4 17 1.3810 2.7118 -0.0007 5 6 3.6004 1.1528 -0.0054 6 7 4.2480 0.0031 -0.0064 7 6 3.6130 -1.1520 -0.0019 8 17 4.5206 -2.6319 -0.0029 9 6 2.2210 -1.1966 0.0037 10 7 1.5525 -2.4193 0.0080 11 6 1.2681 -3.0476 -1.1738 12 1 1.6426 -2.6450 -2.1034 13 6 0.4982 -4.2024 -1.1781 14 7 0.0413 -4.6927 -0.0455 15 14 0.1092 -5.0599 -2.7914 16 1 0.7341 -4.3126 -3.9123 17 1 0.6461 -6.4440 -2.7583 18 1 -1.3623 -5.1041 -2.9862 19 1 -0.3634 0.0036 1.0277 20 1 -0.3634 0.8882 -0.5169 21 1 -0.3634 -0.8918 -0.5106 22 1 4.1580 2.0777 -0.0092 23 1 1.2854 -2.8231 0.8485 24 1 -0.4965 -5.5000 -0.0484 RHF calculation, no. of doubly occupied orbitals= 38 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001155534376.mol2 24 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:05:32 Heat of formation + Delta-G solvation = 27.291714 kcal Electronic energy + Delta-G solvation = -13442.485234 eV Core-core repulsion = 10828.765854 eV Total energy + Delta-G solvation = -2613.719380 eV No. of doubly occupied orbitals = 38 Molecular weight (most abundant/longest-lived isotopes) = 246.002 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -39.93993 -36.54326 -35.84405 -35.38325 -32.89519 -31.33747 -28.88388 -27.23143 -24.37248 -22.19930 -21.54781 -17.57481 -16.79850 -16.63080 -16.04313 -14.69969 -14.46647 -13.88648 -13.31943 -12.97977 -12.72382 -12.49510 -11.96251 -11.48010 -11.22798 -11.12815 -10.96430 -10.81362 -10.53424 -10.30739 -10.11177 -9.68728 -9.09357 -8.88255 -8.20519 -7.45220 -6.03529 -3.41441 1.18583 1.50905 2.13389 2.58165 3.31027 3.38384 3.39891 3.89638 4.37792 4.81379 4.97496 5.00515 5.25635 5.47246 5.84912 5.85230 6.07234 6.19259 6.49164 6.60108 6.86539 7.54150 7.98486 8.15720 9.23159 9.76143 9.99071 11.16437 Molecular weight = 246.00amu Principal moments of inertia in cm(-1) A = 0.023673 B = 0.008813 C = 0.006975 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1182.507424 B = 3176.429416 C = 4013.265655 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.111 4.111 2 C -0.045 4.045 3 C -0.088 4.088 4 Cl -0.069 7.069 5 C 0.102 3.898 6 N -0.474 5.474 7 C 0.153 3.847 8 Cl -0.020 7.020 9 C 0.190 3.810 10 N -0.665 5.665 11 C -0.254 4.254 12 H 0.075 0.925 13 C 0.007 3.993 14 N -0.919 5.919 15 Si 0.912 3.088 16 H -0.277 1.277 17 H -0.287 1.287 18 H -0.288 1.288 19 H 0.072 0.928 20 H 0.065 0.935 21 H 0.098 0.902 22 H 0.162 0.838 23 H 0.401 0.599 24 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.990 10.398 0.957 10.861 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.056 4.056 3 C -0.118 4.118 4 Cl -0.040 7.040 5 C -0.056 4.056 6 N -0.187 5.187 7 C -0.014 4.014 8 Cl 0.008 6.992 9 C 0.088 3.912 10 N -0.304 5.304 11 C -0.383 4.383 12 H 0.093 0.907 13 C -0.191 4.191 14 N -0.564 5.564 15 Si 0.741 3.259 16 H -0.202 1.202 17 H -0.214 1.214 18 H -0.214 1.214 19 H 0.091 0.909 20 H 0.084 0.916 21 H 0.116 0.884 22 H 0.179 0.821 23 H 0.240 0.760 24 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 3.817 10.231 0.790 10.949 hybrid contribution -1.061 -0.597 -0.555 1.338 sum 2.756 9.634 0.235 10.023 Atomic orbital electron populations 1.20748 0.88867 1.04291 1.02817 1.21178 0.98381 0.90488 0.95602 1.22139 0.93511 0.87119 1.08992 1.98332 1.78547 1.30158 1.96995 1.22317 0.89217 0.95550 0.98545 1.67034 1.40386 0.97273 1.13965 1.23542 0.89883 0.88111 0.99889 1.98386 1.74910 1.29738 1.96146 1.18022 0.89031 0.89214 0.94981 1.39779 1.66110 1.16517 1.07947 1.19099 1.27522 1.06412 0.85229 0.90691 1.24785 0.99031 0.98033 0.97294 1.69652 1.38814 1.23434 1.24525 0.86068 0.77839 0.79461 0.82515 1.20183 1.21406 1.21448 0.90898 0.91603 0.88367 0.82078 0.76019 0.92940 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 23. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.85 9.46 36.00 0.34 -1.51 14 2 C -0.05 -0.82 5.94 -104.06 -0.62 -1.43 14 3 C -0.09 -1.39 6.34 -39.39 -0.25 -1.64 14 4 Cl -0.07 -0.91 27.47 -51.86 -1.42 -2.33 14 5 C 0.10 1.59 10.98 -17.46 -0.19 1.40 14 6 N -0.47 -8.67 10.33 -10.11 -0.10 -8.77 14 7 C 0.15 3.05 7.30 -17.18 -0.13 2.93 14 8 Cl -0.02 -0.40 28.60 -51.86 -1.48 -1.89 14 9 C 0.19 3.91 5.88 -83.65 -0.49 3.42 14 10 N -0.66 -15.46 3.83 -9.48 -0.04 -15.50 14 11 C -0.25 -6.46 9.54 -15.11 -0.14 -6.61 14 12 H 0.08 1.94 7.83 -52.49 -0.41 1.53 14 13 C 0.01 0.18 5.50 -17.45 -0.10 0.08 14 14 N -0.92 -25.37 13.06 55.49 0.72 -24.64 14 15 Si 0.91 21.07 29.55 -169.99 -5.02 16.04 14 16 H -0.28 -6.29 7.11 56.52 0.40 -5.89 14 17 H -0.29 -6.73 7.11 56.52 0.40 -6.33 14 18 H -0.29 -6.66 7.11 56.52 0.40 -6.26 14 19 H 0.07 1.14 8.14 -51.93 -0.42 0.71 14 20 H 0.07 0.97 7.03 -51.93 -0.37 0.61 14 21 H 0.10 1.91 7.24 -51.93 -0.38 1.53 14 22 H 0.16 1.97 8.06 -52.49 -0.42 1.55 14 23 H 0.40 9.86 8.03 -40.82 -0.33 9.53 14 24 H 0.26 6.99 8.31 -40.82 -0.34 6.65 14 LS Contribution 249.74 15.07 3.76 3.76 Total: -1.00 -26.45 249.74 -6.62 -33.07 By element: Atomic # 1 Polarization: 5.08 SS G_CDS: -1.46 Total: 3.62 kcal Atomic # 6 Polarization: -1.78 SS G_CDS: -1.58 Total: -3.36 kcal Atomic # 7 Polarization: -49.50 SS G_CDS: 0.58 Total: -48.91 kcal Atomic # 14 Polarization: 21.07 SS G_CDS: -5.02 Total: 16.04 kcal Atomic # 17 Polarization: -1.31 SS G_CDS: -2.91 Total: -4.22 kcal Total LS contribution 3.76 Total: 3.76 kcal Total: -26.45 -6.62 -33.07 kcal The number of atoms in the molecule is 24 The average number of expansion shells was 14.00 The maximum number of expansion shells was 14 The minimum number of expansion shells was 14 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001155534376.mol2 24 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.361 kcal (2) G-P(sol) polarization free energy of solvation -26.450 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.620 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.070 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.292 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds