Wall clock time and date at job start Sun Mar 29 2020 22:21:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.36876 * 119.99774 * 2 1 4 4 H 1.08003 * 119.99808 * 201.95537 * 3 2 1 5 5 C 1.38847 * 120.00164 * 21.95340 * 3 2 1 6 6 N 1.31537 * 119.99895 * 15.76828 * 5 3 2 7 7 Si 1.86803 * 120.00082 * 195.76446 * 5 3 2 8 8 H 1.48498 * 109.47059 * 60.00332 * 7 5 3 9 9 H 1.48503 * 109.47236 * 180.02562 * 7 5 3 10 10 H 1.48498 * 109.47098 * 300.00298 * 7 5 3 11 11 C 1.38594 * 119.99916 * 179.97438 * 2 1 3 12 12 C 1.40282 * 119.23553 * 189.43575 * 11 2 1 13 13 C 1.36212 * 119.86489 * 180.02562 * 12 11 2 14 14 C 1.41019 * 118.29650 * 359.97438 * 13 12 11 15 15 C 1.40335 * 121.24908 * 179.97438 * 14 13 12 16 16 C 1.36228 * 119.70178 * 179.74834 * 15 14 13 17 17 C 1.39267 * 120.87929 * 0.56365 * 16 15 14 18 18 C 1.36321 * 121.01204 * 359.42698 * 17 16 15 19 19 F 1.35101 * 120.14666 * 180.30251 * 18 17 16 20 20 C 1.40805 * 119.70647 * 0.28230 * 18 17 16 21 21 N 1.31808 * 119.23929 * 9.46149 * 11 2 1 22 22 H 1.09001 * 109.47185 * 273.03062 * 1 2 3 23 23 H 1.08999 * 109.47191 * 33.03882 * 1 2 3 24 24 H 1.09003 * 109.47194 * 153.03610 * 1 2 3 25 25 H 0.97002 * 120.00075 * 179.97438 * 6 5 3 26 26 H 1.08004 * 120.06615 * 359.97438 * 12 11 2 27 27 H 1.08008 * 120.85485 * 180.02562 * 13 12 11 28 28 H 1.08003 * 120.14870 * 0.05230 * 15 14 13 29 29 H 1.07998 * 119.55674 * 180.29478 * 16 15 14 30 30 H 1.08001 * 119.49202 * 179.71222 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1494 1.1854 0.0000 4 1 3.1706 1.2193 -0.3497 5 6 1.5306 2.3443 0.4495 6 7 0.4228 2.2673 1.1545 7 14 2.2715 4.0127 0.0532 8 1 2.3355 4.1885 -1.4199 9 1 1.4271 5.0821 0.6437 10 1 3.6411 4.0936 0.6214 11 6 2.1580 -1.2003 0.0005 12 6 3.5463 -1.1898 0.2012 13 6 4.2402 -2.3619 0.2037 14 6 3.5268 -3.5615 0.0019 15 6 4.1794 -4.8038 -0.0079 16 6 3.4584 -5.9435 -0.2006 17 6 2.0811 -5.8928 -0.4000 18 6 1.4142 -4.7039 -0.3967 19 9 0.0768 -4.6756 -0.5858 20 6 2.1253 -3.5055 -0.1947 21 7 1.4974 -2.3252 -0.1880 22 1 -0.3633 0.0543 1.0262 23 1 -0.3633 0.8615 -0.5603 24 1 -0.3634 -0.9160 -0.4660 25 1 -0.0093 3.0768 1.4689 26 1 4.0641 -0.2541 0.3526 27 1 5.3093 -2.3724 0.3571 28 1 5.2477 -4.8565 0.1415 29 1 3.9624 -6.8987 -0.2029 30 1 1.5322 -6.8099 -0.5552 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260409719.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:21:50 Heat of formation + Delta-G solvation = 22.981325 kcal Electronic energy + Delta-G solvation = -17044.771972 eV Core-core repulsion = 14140.795249 eV Total energy + Delta-G solvation = -2903.976723 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 246.086 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -48.01847 -39.75843 -37.32275 -35.07432 -32.44843 -31.96573 -29.35465 -28.58666 -26.73400 -24.59662 -22.94116 -21.62922 -20.99493 -18.50295 -17.02711 -16.67602 -16.40094 -15.36690 -14.94276 -14.92707 -14.46021 -14.16874 -13.74997 -13.38275 -12.96439 -12.58892 -12.51698 -11.99076 -11.69884 -11.57461 -11.35733 -10.94974 -10.92228 -10.74065 -10.61702 -10.46811 -9.60244 -9.48419 -8.70658 -8.37857 -7.66390 -6.98068 -6.64727 -4.04865 1.17026 1.71981 2.75380 2.97662 3.02440 3.04410 3.64285 3.77896 4.52088 4.60379 4.89958 5.05997 5.18315 5.28735 5.57240 5.72892 5.84692 5.93069 6.06720 6.42641 6.53254 6.57675 6.66361 6.77289 6.84310 6.90785 7.05867 7.11819 7.17647 7.26937 7.44784 7.77006 8.21594 8.82823 8.93323 9.49660 10.27146 Molecular weight = 246.09amu Principal moments of inertia in cm(-1) A = 0.039120 B = 0.006292 C = 0.005516 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 715.569436 B = 4448.725033 C = 5074.765051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.117 3.883 2 N -0.392 5.392 3 C -0.318 4.318 4 H 0.103 0.897 5 C 0.036 3.964 6 N -0.849 5.849 7 Si 0.935 3.065 8 H -0.269 1.269 9 H -0.279 1.279 10 H -0.268 1.268 11 C 0.363 3.637 12 C -0.180 4.180 13 C -0.053 4.053 14 C -0.176 4.176 15 C -0.067 4.067 16 C -0.173 4.173 17 C -0.125 4.125 18 C 0.070 3.930 19 F -0.139 7.139 20 C 0.190 3.810 21 N -0.589 5.589 22 H 0.060 0.940 23 H 0.060 0.940 24 H 0.054 0.946 25 H 0.277 0.723 26 H 0.132 0.868 27 H 0.126 0.874 28 H 0.116 0.884 29 H 0.117 0.883 30 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.351 -6.596 -1.533 8.631 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.026 4.026 2 N -0.077 5.077 3 C -0.447 4.447 4 H 0.121 0.879 5 C -0.173 4.173 6 N -0.482 5.482 7 Si 0.760 3.240 8 H -0.194 1.194 9 H -0.204 1.204 10 H -0.193 1.193 11 C 0.114 3.886 12 C -0.203 4.203 13 C -0.077 4.077 14 C -0.184 4.184 15 C -0.086 4.086 16 C -0.194 4.194 17 C -0.146 4.146 18 C 0.047 3.953 19 F -0.118 7.118 20 C 0.057 3.943 21 N -0.316 5.316 22 H 0.079 0.921 23 H 0.079 0.921 24 H 0.072 0.928 25 H 0.088 0.912 26 H 0.150 0.850 27 H 0.144 0.856 28 H 0.134 0.866 29 H 0.135 0.865 30 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 4.048 -5.985 -1.536 7.387 hybrid contribution 0.882 0.881 0.043 1.247 sum 4.930 -5.104 -1.493 7.251 Atomic orbital electron populations 1.21512 0.79262 0.99852 1.02008 1.42707 1.05721 1.01478 1.57747 1.19753 0.99948 0.83467 1.41500 0.87894 1.25509 0.96543 1.00723 0.94499 1.70096 1.18056 1.30582 1.29482 0.85855 0.79099 0.79809 0.79268 1.19374 1.20410 1.19311 1.18504 0.88473 0.86245 0.95393 1.21363 0.94247 0.99095 1.05638 1.20962 0.98771 0.91269 0.96742 1.18205 0.93448 0.94311 1.12395 1.20746 0.98781 0.91551 0.97565 1.20143 0.92968 0.98048 1.08234 1.20542 0.95388 0.95890 1.02796 1.17032 0.77287 0.92781 1.08162 1.91422 1.30188 1.97277 1.92919 1.18352 0.89745 0.90987 0.95168 1.67484 1.37668 0.96154 1.30276 0.92108 0.92114 0.92756 0.91234 0.85007 0.85648 0.86573 0.86542 0.85943 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 2.84 8.81 59.85 0.53 3.36 16 2 N -0.39 -9.83 3.11 -122.35 -0.38 -10.21 16 3 C -0.32 -7.79 8.85 -15.07 -0.13 -7.92 16 4 H 0.10 2.37 6.41 -52.48 -0.34 2.03 16 5 C 0.04 0.86 5.02 -17.45 -0.09 0.77 16 6 N -0.85 -21.26 10.82 55.49 0.60 -20.66 16 7 Si 0.93 18.32 29.58 -169.99 -5.03 13.29 16 8 H -0.27 -5.24 7.11 56.52 0.40 -4.84 16 9 H -0.28 -5.45 7.11 56.52 0.40 -5.05 16 10 H -0.27 -5.14 7.11 56.52 0.40 -4.74 16 11 C 0.36 8.77 7.31 -155.48 -1.14 7.63 16 12 C -0.18 -3.77 9.15 -39.54 -0.36 -4.13 16 13 C -0.05 -0.96 9.88 -39.26 -0.39 -1.35 16 14 C -0.18 -3.39 5.74 -106.76 -0.61 -4.00 16 15 C -0.07 -1.05 9.77 -39.52 -0.39 -1.44 16 16 C -0.17 -2.55 9.95 -39.92 -0.40 -2.95 16 17 C -0.13 -2.05 9.92 -39.89 -0.40 -2.44 16 18 C 0.07 1.40 7.31 -39.30 -0.29 1.11 16 19 F -0.14 -2.93 17.12 2.25 0.04 -2.90 16 20 C 0.19 4.17 6.61 -84.79 -0.56 3.61 16 21 N -0.59 -14.38 8.82 -10.15 -0.09 -14.47 16 22 H 0.06 1.54 7.48 -51.93 -0.39 1.15 16 23 H 0.06 1.46 7.20 -51.93 -0.37 1.09 16 24 H 0.05 1.29 7.14 -51.93 -0.37 0.92 16 25 H 0.28 6.51 8.31 -40.82 -0.34 6.17 16 26 H 0.13 2.61 6.32 -52.48 -0.33 2.28 16 27 H 0.13 1.78 8.06 -52.48 -0.42 1.36 16 28 H 0.12 1.44 8.06 -52.48 -0.42 1.02 16 29 H 0.12 1.34 8.06 -52.49 -0.42 0.91 16 30 H 0.12 1.65 8.06 -52.49 -0.42 1.23 16 LS Contribution 264.19 15.07 3.98 3.98 Total: -1.00 -27.46 264.19 -7.73 -35.18 By element: Atomic # 1 Polarization: 6.15 SS G_CDS: -2.63 Total: 3.53 kcal Atomic # 6 Polarization: -3.52 SS G_CDS: -4.22 Total: -7.74 kcal Atomic # 7 Polarization: -45.48 SS G_CDS: 0.13 Total: -45.35 kcal Atomic # 9 Polarization: -2.93 SS G_CDS: 0.04 Total: -2.90 kcal Atomic # 14 Polarization: 18.32 SS G_CDS: -5.03 Total: 13.29 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -27.46 -7.73 -35.18 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260409719.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.165 kcal (2) G-P(sol) polarization free energy of solvation -27.458 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 30.707 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.184 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.981 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds