Wall clock time and date at job start Sun Mar 29 2020 23:13:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43198 * 179.97438 * 2 1 4 4 C 1.39746 * 120.18050 * 330.77593 * 3 2 1 5 5 C 1.37775 * 119.91218 * 179.97438 * 4 3 2 6 6 C 1.38654 * 120.28280 * 0.02562 * 5 4 3 7 7 Cl 1.73603 * 119.81664 * 180.02562 * 6 5 4 8 8 C 1.38243 * 120.36625 * 359.74521 * 6 5 4 9 9 C 1.38593 * 120.07899 * 0.50730 * 8 6 5 10 10 O 1.35709 * 120.14306 * 179.76575 * 9 8 6 11 11 C 1.42903 * 116.99720 * 359.73092 * 10 9 8 12 12 C 1.53000 * 109.46726 * 179.97438 * 11 10 9 13 13 C 1.50706 * 109.46735 * 180.02562 * 12 11 10 14 14 H 1.07996 * 119.99928 * 359.97438 * 13 12 11 15 15 C 1.37880 * 119.99611 * 179.97438 * 13 12 11 16 16 N 1.31512 * 119.99711 * 179.97438 * 15 13 12 17 17 Si 1.86804 * 120.00219 * 359.97438 * 15 13 12 18 18 H 1.48497 * 109.46794 * 90.00022 * 17 15 13 19 19 H 1.48502 * 109.47140 * 210.00005 * 17 15 13 20 20 H 1.48501 * 109.46982 * 330.00118 * 17 15 13 21 21 H 1.08002 * 120.04159 * 0.02562 * 4 3 2 22 22 H 1.07999 * 119.85277 * 180.02562 * 5 4 3 23 23 H 1.08003 * 119.96295 * 180.28344 * 8 6 5 24 24 H 1.09002 * 109.47382 * 59.99602 * 11 10 9 25 25 H 1.09001 * 109.46938 * 299.99588 * 11 10 9 26 26 H 1.09001 * 109.47194 * 299.99575 * 12 11 10 27 27 H 1.08992 * 109.47399 * 59.99748 * 12 11 10 28 28 H 0.97000 * 119.99684 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2710 -1.0533 0.5898 5 6 4.6487 -1.0473 0.5862 6 6 5.3418 0.0008 0.0000 7 17 7.0778 -0.0043 0.0018 8 6 4.6581 1.0469 -0.5909 9 6 3.2722 1.0589 -0.5913 10 8 2.5997 2.0876 -1.1668 11 6 3.3843 3.1301 -1.7498 12 6 2.4585 4.1928 -2.3452 13 6 3.2859 5.2919 -2.9606 14 1 4.3641 5.2379 -2.9298 15 6 2.6663 6.3662 -3.5630 16 7 3.3882 7.3256 -4.0996 17 14 0.8013 6.4591 -3.6170 18 1 0.3060 7.1680 -2.4097 19 1 0.3775 7.1978 -4.8335 20 1 0.2380 5.0855 -3.6505 21 1 2.7349 -1.8719 1.0471 22 1 5.1910 -1.8625 1.0419 23 1 5.2045 1.8578 -1.0496 24 1 4.0134 2.7145 -2.5370 25 1 4.0131 3.5834 -0.9836 26 1 1.8300 3.7391 -3.1115 27 1 1.8291 4.6084 -1.5584 28 1 2.9523 8.0812 -4.5237 RHF calculation, no. of doubly occupied orbitals= 42 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000132551623.mol2 28 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:13:05 Heat of formation + Delta-G solvation = -0.371226 kcal Electronic energy + Delta-G solvation = -14931.833435 eV Core-core repulsion = 12167.005731 eV Total energy + Delta-G solvation = -2764.827704 eV No. of doubly occupied orbitals = 42 Molecular weight (most abundant/longest-lived isotopes) = 251.045 amu Computer time = 0.18 seconds Orbital eigenvalues (eV) -40.40862 -37.88073 -36.85966 -36.07315 -33.47369 -31.51125 -31.10144 -29.88260 -25.56513 -24.02881 -22.63044 -20.83498 -19.27507 -17.95661 -16.78124 -16.33515 -15.89672 -15.52952 -14.65266 -14.24374 -14.04795 -13.82156 -13.34433 -13.18692 -12.92607 -12.65665 -12.46909 -12.12289 -11.87088 -11.37109 -11.21646 -11.18426 -10.90328 -10.36193 -10.15728 -9.92465 -9.44536 -9.15290 -8.69237 -8.39970 -6.20378 -4.22401 0.43815 1.07832 1.80485 2.72861 2.77474 3.23463 3.24812 3.32695 3.37657 3.67145 3.84835 4.33301 4.51425 4.77601 4.86303 5.13133 5.13668 5.30137 5.56861 5.70628 5.74417 5.88376 5.92832 6.20362 6.29274 6.87731 7.09873 7.39104 7.54455 7.59921 8.29763 8.79356 9.39474 10.91818 Molecular weight = 251.05amu Principal moments of inertia in cm(-1) A = 0.021365 B = 0.005587 C = 0.004443 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1310.237418 B = 5010.276705 C = 6300.066891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.418 5.418 2 C 0.266 3.734 3 C -0.072 4.072 4 C -0.020 4.020 5 C -0.162 4.162 6 C 0.035 3.965 7 Cl -0.059 7.059 8 C -0.206 4.206 9 C 0.206 3.794 10 O -0.305 6.305 11 C 0.066 3.934 12 C -0.009 4.009 13 C -0.530 4.530 14 H 0.076 0.924 15 C 0.075 3.925 16 N -0.895 5.895 17 Si 0.878 3.122 18 H -0.274 1.274 19 H -0.285 1.285 20 H -0.263 1.263 21 H 0.146 0.854 22 H 0.143 0.857 23 H 0.154 0.846 24 H 0.066 0.934 25 H 0.066 0.934 26 H 0.029 0.971 27 H 0.025 0.975 28 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.157 -17.031 9.501 20.173 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.094 5.094 2 C -0.049 4.049 3 C -0.077 4.077 4 C -0.040 4.040 5 C -0.181 4.181 6 C 0.007 3.993 7 Cl -0.030 7.030 8 C -0.225 4.225 9 C 0.154 3.846 10 O -0.216 6.216 11 C -0.007 4.007 12 C -0.047 4.047 13 C -0.567 4.567 14 H 0.094 0.906 15 C -0.128 4.128 16 N -0.532 5.532 17 Si 0.705 3.295 18 H -0.200 1.200 19 H -0.211 1.211 20 H -0.188 1.188 21 H 0.164 0.836 22 H 0.161 0.839 23 H 0.172 0.828 24 H 0.084 0.916 25 H 0.084 0.916 26 H 0.047 0.953 27 H 0.043 0.957 28 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 3.334 -16.777 9.355 19.495 hybrid contribution -0.024 0.376 -0.185 0.420 sum 3.310 -16.401 9.170 19.079 Atomic orbital electron populations 1.81205 1.11909 1.07594 1.08685 1.25203 0.92181 0.93776 0.93724 1.15402 0.85007 0.97583 1.09692 1.20894 0.93169 0.95570 0.94400 1.20780 0.93515 0.99367 1.04472 1.20906 0.85023 0.95533 0.97851 1.98399 1.09228 1.98330 1.97011 1.21213 0.92773 1.01654 1.06907 1.18904 0.89636 0.87069 0.88945 1.86200 1.37340 1.30019 1.68057 1.23350 0.95320 0.85644 0.96408 1.19610 0.95924 0.92714 0.96413 1.20784 0.94819 1.03681 1.37459 0.90560 1.24909 0.98450 0.95099 0.94338 1.69882 1.35818 1.10161 1.37386 0.86792 0.85829 0.78938 0.77941 1.19994 1.21052 1.18771 0.83597 0.83939 0.82824 0.91586 0.91608 0.95254 0.95687 0.92332 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -7.04 18.54 41.84 0.78 -6.27 15 2 C 0.27 3.91 14.87 -22.48 -0.33 3.58 15 3 C -0.07 -0.89 5.75 -106.67 -0.61 -1.51 15 4 C -0.02 -0.17 9.75 -39.19 -0.38 -0.55 15 5 C -0.16 -1.35 9.80 -39.60 -0.39 -1.74 15 6 C 0.03 0.36 6.32 -39.43 -0.25 0.11 15 7 Cl -0.06 -0.57 28.94 -51.86 -1.50 -2.08 15 8 C -0.21 -2.53 8.80 -39.45 -0.35 -2.87 15 9 C 0.21 2.90 6.69 -38.72 -0.26 2.64 15 10 O -0.30 -5.34 9.57 -18.83 -0.18 -5.52 15 11 C 0.07 1.22 4.68 37.16 0.17 1.40 15 12 C -0.01 -0.21 4.41 -27.88 -0.12 -0.33 15 13 C -0.53 -14.36 9.66 -34.44 -0.33 -14.70 15 14 H 0.08 2.17 7.99 -52.49 -0.42 1.75 15 15 C 0.07 2.11 5.47 -17.82 -0.10 2.01 15 16 N -0.89 -26.63 13.96 55.43 0.77 -25.86 15 17 Si 0.88 21.32 27.47 -169.99 -4.67 16.66 15 18 H -0.27 -6.57 7.11 56.52 0.40 -6.17 15 19 H -0.28 -6.83 7.11 56.52 0.40 -6.43 15 20 H -0.26 -6.26 6.54 56.52 0.37 -5.89 15 21 H 0.15 0.85 8.06 -52.49 -0.42 0.42 15 22 H 0.14 0.82 8.06 -52.49 -0.42 0.40 15 23 H 0.15 1.89 6.30 -52.48 -0.33 1.55 15 24 H 0.07 1.15 7.65 -51.93 -0.40 0.75 15 25 H 0.07 1.14 7.67 -51.93 -0.40 0.74 15 26 H 0.03 0.69 7.20 -51.93 -0.37 0.32 15 27 H 0.02 0.58 7.57 -51.93 -0.39 0.19 15 28 H 0.27 7.43 8.31 -40.82 -0.34 7.09 15 LS Contribution 274.25 15.07 4.13 4.13 Total: -1.00 -30.22 274.25 -5.95 -36.17 By element: Atomic # 1 Polarization: -2.94 SS G_CDS: -2.32 Total: -5.26 kcal Atomic # 6 Polarization: -9.02 SS G_CDS: -2.95 Total: -11.97 kcal Atomic # 7 Polarization: -33.67 SS G_CDS: 1.55 Total: -32.12 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -0.18 Total: -5.52 kcal Atomic # 14 Polarization: 21.32 SS G_CDS: -4.67 Total: 16.66 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.50 Total: -2.08 kcal Total LS contribution 4.13 Total: 4.13 kcal Total: -30.22 -5.95 -36.17 kcal The number of atoms in the molecule is 28 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000132551623.mol2 28 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 35.796 kcal (2) G-P(sol) polarization free energy of solvation -30.221 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.371 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.18 seconds