Wall clock time and date at job start Sun Mar 29 2020 22:58:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31002 * 1 3 3 C 1.50697 * 119.99886 * 2 1 4 4 N 1.46903 * 109.46916 * 125.19414 * 3 2 1 5 5 C 1.46897 * 111.00128 * 297.11748 * 4 3 2 6 6 C 1.50705 * 109.47410 * 288.53867 * 5 4 3 7 7 H 1.08001 * 119.99701 * 0.33517 * 6 5 4 8 8 C 1.37869 * 120.00093 * 180.34495 * 6 5 4 9 9 N 1.31513 * 120.00221 * 359.97438 * 8 6 5 10 10 Si 1.86803 * 120.00068 * 179.97438 * 8 6 5 11 11 H 1.48500 * 109.46974 * 89.99856 * 10 8 6 12 12 H 1.48502 * 109.47009 * 209.99724 * 10 8 6 13 13 H 1.48494 * 109.46950 * 329.99755 * 10 8 6 14 14 C 1.38605 * 110.99892 * 61.07420 * 4 3 2 15 15 N 1.32958 * 120.53360 * 256.85848 * 14 4 3 16 16 C 1.31762 * 120.69667 * 180.02562 * 15 14 4 17 17 N 1.31779 * 121.86037 * 359.97438 * 16 15 14 18 18 C 1.32554 * 121.01662 * 0.02562 * 17 16 15 19 19 C 1.38206 * 119.18324 * 0.02562 * 18 17 16 20 20 Cl 1.73600 * 120.84241 * 179.97438 * 19 18 17 21 21 H 1.07997 * 120.00155 * 359.97438 * 1 2 3 22 22 H 1.08004 * 120.00139 * 180.02562 * 1 2 3 23 23 H 1.08003 * 119.99948 * 180.02562 * 2 1 3 24 24 H 1.09006 * 109.47311 * 5.19624 * 3 2 1 25 25 H 1.09001 * 109.47223 * 245.19492 * 3 2 1 26 26 H 1.09000 * 109.47032 * 48.53298 * 5 4 3 27 27 H 1.09002 * 109.47273 * 168.53209 * 5 4 3 28 28 H 0.97007 * 120.00478 * 180.02562 * 9 8 6 29 29 H 1.08007 * 119.06978 * 180.02562 * 16 15 14 30 30 H 1.08001 * 120.40702 * 179.72270 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 7 2.9996 1.3300 1.1319 5 6 2.2805 1.2672 2.4113 6 6 1.5725 2.5752 2.6544 7 1 1.6447 3.3714 1.9282 8 6 0.8329 2.7555 3.8038 9 7 0.7448 1.7859 4.6880 10 14 -0.0441 4.3770 4.1055 11 1 -1.4124 4.3139 3.5318 12 1 -0.1310 4.6284 5.5665 13 1 0.7139 5.4776 3.4581 14 6 3.9268 0.3045 1.0323 15 7 3.8100 -0.7869 1.7825 16 6 4.6898 -1.7635 1.6908 17 7 5.7119 -1.7032 0.8613 18 6 5.8966 -0.6482 0.0804 19 6 4.9997 0.4015 0.1426 20 17 5.2006 1.8043 -0.8601 21 1 -0.5400 0.9353 0.0004 22 1 -0.5400 -0.9353 0.0004 23 1 1.8500 -0.9353 -0.0004 24 1 1.3588 2.1315 0.0931 25 1 2.6185 1.4042 -0.9329 26 1 1.5496 0.4593 2.3780 27 1 2.9898 1.0825 3.2181 28 1 0.2241 1.9126 5.4966 29 1 4.5693 -2.6384 2.3125 30 1 6.7403 -0.6072 -0.5926 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000488484292.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:58:11 Heat of formation + Delta-G solvation = 78.100717 kcal Electronic energy + Delta-G solvation = -16458.954383 eV Core-core repulsion = 13702.510751 eV Total energy + Delta-G solvation = -2756.443633 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 253.068 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -40.89637 -37.61698 -36.39758 -33.41997 -32.87977 -32.16722 -30.55560 -27.38099 -25.51773 -24.23304 -23.16995 -21.22102 -19.57395 -17.53542 -17.01623 -16.12142 -15.87839 -15.56232 -14.70850 -14.45441 -14.34052 -13.68368 -13.53887 -12.75729 -12.27186 -12.05669 -11.67528 -11.24299 -11.09477 -10.95482 -10.87513 -10.83980 -10.60392 -10.44266 -10.08265 -9.43596 -9.16751 -8.98209 -8.81434 -8.47372 -7.75649 -6.06447 -4.09546 0.99953 1.25043 2.26192 2.71613 3.28537 3.35363 3.38964 3.89704 4.04931 4.31336 4.41089 4.51942 5.08489 5.25740 5.29935 5.33178 5.57299 5.60329 5.85008 6.23706 6.34014 6.36692 6.83232 6.99925 7.13600 7.18909 7.37261 7.65154 7.78619 8.00823 8.30000 8.38107 8.96212 9.53791 11.03739 Molecular weight = 253.07amu Principal moments of inertia in cm(-1) A = 0.023246 B = 0.007191 C = 0.006946 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1204.219765 B = 3892.911121 C = 4030.217415 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.182 4.182 3 C 0.098 3.902 4 N -0.467 5.467 5 C 0.201 3.799 6 C -0.516 4.516 7 H 0.063 0.937 8 C 0.061 3.939 9 N -0.891 5.891 10 Si 0.897 3.103 11 H -0.280 1.280 12 H -0.286 1.286 13 H -0.273 1.273 14 C 0.384 3.616 15 N -0.528 5.528 16 C 0.310 3.690 17 N -0.538 5.538 18 C 0.162 3.838 19 C -0.156 4.156 20 Cl -0.039 7.039 21 H 0.101 0.899 22 H 0.090 0.910 23 H 0.095 0.905 24 H 0.103 0.897 25 H 0.074 0.926 26 H 0.023 0.977 27 H 0.035 0.965 28 H 0.262 0.738 29 H 0.196 0.804 30 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.881 -4.319 -10.444 12.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.202 4.202 3 C -0.027 4.027 4 N -0.184 5.184 5 C 0.077 3.923 6 C -0.555 4.555 7 H 0.082 0.918 8 C -0.142 4.142 9 N -0.529 5.529 10 Si 0.725 3.275 11 H -0.206 1.206 12 H -0.212 1.212 13 H -0.198 1.198 14 C 0.143 3.857 15 N -0.248 5.248 16 C 0.020 3.980 17 N -0.255 5.255 18 C -0.003 4.003 19 C -0.191 4.191 20 Cl -0.011 7.011 21 H 0.119 0.881 22 H 0.109 0.891 23 H 0.113 0.887 24 H 0.121 0.879 25 H 0.092 0.908 26 H 0.041 0.959 27 H 0.053 0.947 28 H 0.072 0.928 29 H 0.212 0.788 30 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 5.907 -4.505 -9.780 12.282 hybrid contribution -0.696 0.956 -0.023 1.182 sum 5.212 -3.549 -9.803 11.656 Atomic orbital electron populations 1.23748 0.95745 1.01604 0.99318 1.23429 0.96958 0.98651 1.01167 1.21317 0.93636 0.96017 0.91720 1.59780 1.16985 1.33479 1.08166 1.19830 0.92971 0.97687 0.81778 1.21090 1.29887 0.99214 1.05312 0.91845 1.24931 0.96557 0.96835 0.95852 1.69974 1.40755 1.32074 1.10117 0.86516 0.79862 0.83784 0.77388 1.20647 1.21211 1.19760 1.20450 0.92113 0.86990 0.86153 1.68934 1.29275 1.00536 1.26019 1.24907 0.84713 0.96261 0.92089 1.68499 1.23066 1.25694 1.08232 1.22985 0.96122 0.86772 0.94388 1.22443 1.00579 0.93872 1.02218 1.98348 1.96674 1.39349 1.66718 0.88058 0.89134 0.88669 0.87876 0.90775 0.95870 0.94694 0.92834 0.78759 0.81338 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.78 14.32 29.01 0.42 -2.36 16 2 C -0.18 -3.26 7.57 -36.03 -0.27 -3.53 16 3 C 0.10 1.82 5.44 -4.98 -0.03 1.79 16 4 N -0.47 -9.93 4.24 -175.71 -0.74 -10.67 16 5 C 0.20 5.14 3.82 -4.97 -0.02 5.12 16 6 C -0.52 -14.08 8.55 -34.44 -0.29 -14.37 16 7 H 0.06 1.70 7.47 -52.49 -0.39 1.30 16 8 C 0.06 1.68 5.46 -17.82 -0.10 1.59 16 9 N -0.89 -26.08 13.29 55.43 0.74 -25.35 16 10 Si 0.90 21.23 29.54 -169.99 -5.02 16.20 16 11 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 12 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 13 H -0.27 -6.37 7.11 56.52 0.40 -5.97 16 14 C 0.38 7.41 4.82 -154.71 -0.75 6.66 16 15 N -0.53 -10.19 8.83 -13.78 -0.12 -10.31 16 16 C 0.31 4.88 12.28 -92.20 -1.13 3.75 16 17 N -0.54 -8.08 10.43 -14.64 -0.15 -8.23 16 18 C 0.16 2.28 11.11 -17.25 -0.19 2.08 16 19 C -0.16 -2.53 6.24 -39.04 -0.24 -2.78 16 20 Cl -0.04 -0.58 27.15 -51.86 -1.41 -1.98 16 21 H 0.10 1.67 7.84 -52.49 -0.41 1.26 16 22 H 0.09 1.35 8.06 -52.48 -0.42 0.93 16 23 H 0.10 1.72 7.42 -52.48 -0.39 1.33 16 24 H 0.10 1.99 6.83 -51.93 -0.35 1.63 16 25 H 0.07 1.22 6.68 -51.93 -0.35 0.87 16 26 H 0.02 0.64 6.84 -51.93 -0.36 0.28 16 27 H 0.03 1.00 7.75 -51.93 -0.40 0.60 16 28 H 0.26 7.27 8.31 -40.82 -0.34 6.93 16 29 H 0.20 2.40 8.06 -52.48 -0.42 1.98 16 30 H 0.17 1.77 8.06 -52.49 -0.42 1.34 16 LS Contribution 277.72 15.07 4.19 4.19 Total: -1.00 -29.98 277.72 -8.19 -38.17 By element: Atomic # 1 Polarization: 3.08 SS G_CDS: -3.06 Total: 0.03 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -2.61 Total: -2.04 kcal Atomic # 7 Polarization: -54.28 SS G_CDS: -0.28 Total: -54.56 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -5.02 Total: 16.20 kcal Atomic # 17 Polarization: -0.58 SS G_CDS: -1.41 Total: -1.98 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -29.98 -8.19 -38.17 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000488484292.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 116.269 kcal (2) G-P(sol) polarization free energy of solvation -29.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.168 kcal (6) G-S(sol) free energy of system = (1) + (5) 78.101 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds