Wall clock time and date at job start Sun Mar 29 2020 22:58:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46499 * 109.46759 * 220.59943 * 3 2 1 5 5 C 1.36940 * 120.00336 * 263.91016 * 4 3 2 6 6 H 1.07997 * 120.00585 * 199.39844 * 5 4 3 7 7 C 1.38816 * 119.99289 * 19.40847 * 5 4 3 8 8 N 1.31621 * 120.00524 * 22.26990 * 7 5 4 9 9 Si 1.86801 * 119.99544 * 202.27229 * 7 5 4 10 10 H 1.48498 * 109.47367 * 89.99728 * 9 7 5 11 11 H 1.48499 * 109.46997 * 209.99846 * 9 7 5 12 12 H 1.48498 * 109.47455 * 329.99621 * 9 7 5 13 13 C 1.46504 * 120.00250 * 83.91770 * 4 3 2 14 14 C 1.52994 * 109.47354 * 89.99839 * 13 4 3 15 15 N 1.46502 * 109.47608 * 180.02562 * 14 13 4 16 16 C 1.35042 * 126.04090 * 124.99244 * 15 14 13 17 17 C 1.35371 * 107.72757 * 179.97438 * 16 15 14 18 18 Cl 1.73603 * 126.04435 * 179.97438 * 17 16 15 19 19 C 1.39924 * 107.90894 * 0.02562 * 17 16 15 20 20 N 1.30852 * 108.21512 * 359.76025 * 19 17 16 21 21 H 4.40631 * 5.51430 * 179.97438 * 4 1 2 22 22 H 1.08997 * 109.47496 * 100.60358 * 3 2 1 23 23 H 1.08998 * 109.47214 * 340.59840 * 3 2 1 24 24 H 0.96998 * 119.99879 * 180.02562 * 8 7 5 25 25 H 1.09006 * 109.46886 * 329.99803 * 13 4 3 26 26 H 1.09004 * 109.46958 * 209.99841 * 13 4 3 27 27 H 1.09004 * 109.47089 * 299.99921 * 14 13 4 28 28 H 1.08996 * 109.47060 * 60.00198 * 14 13 4 29 29 H 1.08000 * 126.13193 * 359.95012 * 16 15 14 30 30 H 1.08000 * 125.89112 * 180.02562 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1338 1.0496 0.8989 5 6 3.4801 2.2755 0.3964 6 1 4.1182 2.9329 0.9681 7 6 3.0105 2.6733 -0.8479 8 7 1.9262 2.1210 -1.3496 9 14 3.9177 3.9924 -1.8104 10 1 4.9428 3.3565 -2.6765 11 1 2.9524 4.7415 -2.6542 12 1 4.5792 4.9279 -0.8657 13 6 3.2513 0.7871 2.3354 14 6 4.6447 0.2339 2.6405 15 7 4.7621 -0.0292 4.0769 16 6 5.1105 -1.2044 4.6435 17 6 5.1031 -1.0329 5.9863 18 17 5.4796 -2.2429 7.1728 19 6 4.7372 0.2919 6.2488 20 7 4.5373 0.8954 5.1050 21 1 -1.0501 -0.0001 -0.0003 22 1 3.0093 0.1899 -1.0101 23 1 3.0098 -0.9685 0.3414 24 1 1.5984 2.3988 -2.2193 25 1 2.4976 0.0586 2.6344 26 1 3.0996 1.7145 2.8878 27 1 4.7964 -0.6935 2.0881 28 1 5.3983 0.9624 2.3414 29 1 5.3514 -2.1175 4.1194 30 1 4.6409 0.7404 7.2266 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491637775.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 22:58:22 Heat of formation + Delta-G solvation = 155.228711 kcal Electronic energy + Delta-G solvation = -15728.875645 eV Core-core repulsion = 12975.776533 eV Total energy + Delta-G solvation = -2753.099112 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 253.068 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -41.10382 -36.60081 -36.29093 -33.48526 -31.64907 -31.10349 -29.89096 -27.78708 -26.11133 -24.09258 -21.51040 -21.07204 -20.30157 -17.59947 -17.20418 -16.39884 -15.40921 -15.02680 -14.56480 -14.17676 -13.84537 -13.53442 -13.29532 -13.05897 -12.68735 -12.13560 -11.60778 -11.51511 -11.36393 -11.23196 -10.89271 -10.63893 -10.37636 -10.23158 -10.09356 -9.45547 -9.02846 -8.86682 -8.56857 -8.31754 -7.14856 -5.89797 -3.35440 1.88323 2.07372 2.67465 2.93474 3.31477 3.39783 3.40685 4.07327 4.29907 4.44756 4.71190 4.82100 5.19522 5.22664 5.50458 5.57459 5.65578 5.69395 5.80073 5.84294 6.31258 6.47945 6.50936 6.69017 7.02011 7.07098 7.31890 7.66932 7.69317 8.15832 8.97647 9.11133 9.62843 10.08076 11.13260 Molecular weight = 253.07amu Principal moments of inertia in cm(-1) A = 0.031112 B = 0.004726 C = 0.004293 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 899.760954 B = 5923.246098 C = 6520.047074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.293 4.293 2 C -0.102 4.102 3 C 0.268 3.732 4 N -0.581 5.581 5 C -0.277 4.277 6 H 0.078 0.922 7 C 0.010 3.990 8 N -0.883 5.883 9 Si 0.902 3.098 10 H -0.286 1.286 11 H -0.292 1.292 12 H -0.278 1.278 13 C 0.141 3.859 14 C 0.107 3.893 15 N -0.344 5.344 16 C 0.070 3.930 17 C -0.197 4.197 18 Cl -0.056 7.056 19 C 0.051 3.949 20 N -0.274 5.274 21 H 0.191 0.809 22 H 0.095 0.905 23 H 0.037 0.963 24 H 0.256 0.744 25 H 0.043 0.957 26 H 0.066 0.934 27 H 0.092 0.908 28 H 0.091 0.909 29 H 0.179 0.821 30 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.892 -8.165 10.244 14.364 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.312 4.312 2 C -0.105 4.105 3 C 0.143 3.857 4 N -0.301 5.301 5 C -0.405 4.405 6 H 0.095 0.905 7 C -0.191 4.191 8 N -0.525 5.525 9 Si 0.731 3.269 10 H -0.213 1.213 11 H -0.218 1.218 12 H -0.204 1.204 13 C 0.013 3.987 14 C -0.016 4.016 15 N -0.125 5.125 16 C -0.080 4.080 17 C -0.236 4.236 18 Cl -0.028 7.028 19 C -0.135 4.135 20 N -0.096 5.096 21 H 0.208 0.792 22 H 0.113 0.887 23 H 0.055 0.945 24 H 0.067 0.933 25 H 0.061 0.939 26 H 0.084 0.916 27 H 0.110 0.890 28 H 0.110 0.890 29 H 0.197 0.803 30 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 5.515 -7.051 9.400 12.980 hybrid contribution 0.297 -0.101 -0.124 0.338 sum 5.812 -7.152 9.276 13.076 Atomic orbital electron populations 1.24216 0.95387 1.06353 1.05271 1.24178 0.95275 0.94944 0.96071 1.17772 0.83082 0.88518 0.96335 1.44029 1.74572 1.11373 1.00087 1.19220 1.25256 0.94404 1.01664 0.90461 1.24969 0.95864 0.98584 0.99649 1.70145 1.19102 1.44754 1.18509 0.86303 0.79228 0.81208 0.80138 1.21266 1.21797 1.20356 1.20920 0.91188 0.99771 0.86841 1.23017 1.04029 1.03004 0.71530 1.48889 1.49569 1.06586 1.07498 1.22278 1.00621 0.92287 0.92792 1.20714 1.20722 0.92536 0.89643 1.98298 1.93755 1.54622 1.56132 1.23814 1.00081 0.91567 0.98035 1.77557 1.22460 1.15377 0.94178 0.79174 0.88745 0.94513 0.93347 0.93884 0.91609 0.88989 0.89045 0.80346 0.79691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.29 -6.60 19.25 29.55 0.57 -6.03 16 2 C -0.10 -2.42 11.50 -37.12 -0.43 -2.84 16 3 C 0.27 5.97 5.41 -6.83 -0.04 5.93 16 4 N -0.58 -13.36 2.49 -176.57 -0.44 -13.80 16 5 C -0.28 -7.09 9.63 -15.06 -0.14 -7.24 16 6 H 0.08 1.97 7.92 -52.49 -0.42 1.55 16 7 C 0.01 0.25 4.82 -17.43 -0.08 0.17 16 8 N -0.88 -24.37 9.61 55.49 0.53 -23.83 16 9 Si 0.90 20.81 29.61 -169.99 -5.03 15.78 16 10 H -0.29 -6.53 7.11 56.52 0.40 -6.13 16 11 H -0.29 -6.91 7.11 56.52 0.40 -6.50 16 12 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 13 C 0.14 2.76 5.86 -4.04 -0.02 2.74 16 14 C 0.11 1.68 6.83 -4.04 -0.03 1.65 16 15 N -0.34 -5.22 3.68 -61.33 -0.23 -5.44 16 16 C 0.07 0.89 11.43 -17.16 -0.20 0.70 16 17 C -0.20 -2.52 6.65 -39.97 -0.27 -2.79 16 18 Cl -0.06 -0.62 29.30 -51.86 -1.52 -2.14 16 19 C 0.05 0.69 12.02 -17.34 -0.21 0.48 16 20 N -0.27 -4.45 12.42 30.64 0.38 -4.07 16 21 H 0.19 3.60 7.80 -54.08 -0.42 3.18 16 22 H 0.09 2.28 6.59 -51.93 -0.34 1.94 16 23 H 0.04 0.69 8.12 -51.93 -0.42 0.27 16 24 H 0.26 6.96 8.31 -40.82 -0.34 6.62 16 25 H 0.04 0.84 8.07 -51.93 -0.42 0.42 16 26 H 0.07 1.41 8.04 -51.93 -0.42 0.99 16 27 H 0.09 1.25 8.07 -51.93 -0.42 0.83 16 28 H 0.09 1.51 8.14 -51.93 -0.42 1.09 16 29 H 0.18 1.71 8.06 -52.49 -0.42 1.28 16 30 H 0.19 1.93 8.06 -52.49 -0.42 1.50 16 LS Contribution 289.01 15.07 4.36 4.36 Total: -1.00 -29.26 289.01 -6.05 -35.31 By element: Atomic # 1 Polarization: 4.33 SS G_CDS: -3.26 Total: 1.07 kcal Atomic # 6 Polarization: -6.38 SS G_CDS: -0.85 Total: -7.23 kcal Atomic # 7 Polarization: -47.40 SS G_CDS: 0.25 Total: -47.15 kcal Atomic # 14 Polarization: 20.81 SS G_CDS: -5.03 Total: 15.78 kcal Atomic # 17 Polarization: -0.62 SS G_CDS: -1.52 Total: -2.14 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -29.26 -6.05 -35.31 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491637775.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 190.544 kcal (2) G-P(sol) polarization free energy of solvation -29.261 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 161.283 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.054 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.315 kcal (6) G-S(sol) free energy of system = (1) + (5) 155.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.29 seconds