Wall clock time and date at job start Sun Mar 29 2020 23:00:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.36936 * 119.99725 * 2 1 4 4 H 1.07997 * 120.00171 * 148.72511 * 3 2 1 5 5 C 1.38853 * 119.99717 * 328.72521 * 3 2 1 6 6 N 1.31532 * 119.99742 * 161.75112 * 5 3 2 7 7 Si 1.86800 * 120.00095 * 341.74328 * 5 3 2 8 8 H 1.48500 * 109.46741 * 94.78011 * 7 5 3 9 9 H 1.48496 * 109.47024 * 214.77721 * 7 5 3 10 10 H 1.48495 * 109.47270 * 334.77737 * 7 5 3 11 11 C 1.38516 * 120.00347 * 179.71695 * 2 1 3 12 12 N 1.33085 * 120.56258 * 178.38014 * 11 2 1 13 13 C 1.31830 * 120.60456 * 180.02562 * 12 11 2 14 14 Cl 1.73602 * 119.06010 * 179.97438 * 13 12 11 15 15 N 1.31921 * 121.88495 * 359.97438 * 13 12 11 16 16 C 1.32669 * 121.00893 * 0.02562 * 15 13 12 17 17 C 1.38000 * 119.06129 * 359.71735 * 16 15 13 18 18 C 1.51051 * 109.96136 * 180.37143 * 17 16 15 19 19 C 1.54429 * 105.12819 * 17.25566 * 18 17 16 20 20 C 1.51203 * 131.18501 * 179.97438 * 16 15 13 21 21 H 1.08998 * 109.47255 * 245.15300 * 1 2 3 22 22 H 1.09002 * 109.47390 * 5.16515 * 1 2 3 23 23 H 1.08999 * 109.46580 * 125.15915 * 1 2 3 24 24 H 0.97005 * 119.99948 * 179.97438 * 6 5 3 25 25 H 1.09004 * 110.31614 * 136.16584 * 18 17 16 26 26 H 1.09003 * 110.31476 * 258.24376 * 18 17 16 27 27 H 1.09001 * 110.82265 * 92.16376 * 19 18 17 28 28 H 1.08996 * 110.82685 * 215.52165 * 19 18 17 29 29 H 1.09001 * 110.29983 * 281.89199 * 20 16 15 30 30 H 1.08994 * 110.30483 * 44.03997 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1496 1.1859 0.0000 4 1 3.1119 1.2540 0.4855 5 6 1.6066 2.3010 -0.6243 6 7 2.0578 3.5020 -0.3343 7 14 0.2354 2.0955 -1.8761 8 1 -1.0778 2.2661 -1.2042 9 1 0.3820 3.1178 -2.9431 10 1 0.3121 0.7393 -2.4761 11 6 2.1577 -1.1995 0.0059 12 7 3.4880 -1.2129 -0.0264 13 6 4.1481 -2.3541 -0.0213 14 17 5.8833 -2.3247 -0.0650 15 7 3.5277 -3.5177 0.0161 16 6 2.2032 -3.5853 0.0498 17 6 1.4721 -2.4149 0.0513 18 6 -0.0045 -2.7294 0.1015 19 6 -0.0881 -4.1978 0.5723 20 6 1.2677 -4.7723 0.0948 21 1 -0.3633 -0.4318 0.9325 22 1 -0.3634 1.0235 -0.0925 23 1 -0.3632 -0.5918 -0.8402 24 1 1.6787 4.2810 -0.7707 25 1 -0.5069 -2.0746 0.8136 26 1 -0.4481 -2.6221 -0.8884 27 1 -0.1811 -4.2522 1.6570 28 1 -0.9170 -4.7135 0.0877 29 1 1.1746 -5.2183 -0.8954 30 1 1.6281 -5.5110 0.8107 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001166798996.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:00:34 Heat of formation + Delta-G solvation = 65.760195 kcal Electronic energy + Delta-G solvation = -16635.294876 eV Core-core repulsion = 13878.316118 eV Total energy + Delta-G solvation = -2756.978758 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 253.068 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -40.54770 -36.95851 -36.67005 -35.69416 -32.75627 -31.54904 -29.05038 -28.42410 -26.25169 -24.94408 -22.34806 -21.38970 -20.37082 -17.95061 -16.72293 -16.59787 -15.65978 -15.36048 -14.47823 -14.30779 -13.83037 -13.69955 -13.04312 -12.94903 -12.79483 -12.43359 -11.97978 -11.79822 -11.38531 -11.10370 -11.00896 -10.82881 -10.75959 -10.34169 -10.31750 -9.98795 -9.80345 -9.21476 -8.64794 -8.25986 -7.34659 -6.64613 -4.05606 1.69941 2.10079 2.13388 2.88517 3.08109 3.09603 3.87503 3.97469 4.41369 4.51844 4.82310 4.84619 5.13186 5.23675 5.42364 5.55034 5.70345 5.77716 5.83422 5.92101 5.97217 6.05055 6.13686 6.21371 6.31021 6.52555 6.78687 7.23661 7.77754 7.98395 8.35276 8.80110 9.03072 9.21657 10.45202 Molecular weight = 253.07amu Principal moments of inertia in cm(-1) A = 0.018973 B = 0.009588 C = 0.006711 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1475.393916 B = 2919.539239 C = 4171.318576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.420 5.420 3 C -0.301 4.301 4 H 0.121 0.879 5 C 0.053 3.947 6 N -0.850 5.850 7 Si 0.886 3.114 8 H -0.273 1.273 9 H -0.285 1.285 10 H -0.263 1.263 11 C 0.416 3.584 12 N -0.551 5.551 13 C 0.410 3.590 14 Cl -0.008 7.008 15 N -0.587 5.587 16 C 0.191 3.809 17 C -0.301 4.301 18 C -0.062 4.062 19 C -0.117 4.117 20 C -0.063 4.063 21 H 0.066 0.934 22 H 0.079 0.921 23 H 0.061 0.939 24 H 0.279 0.721 25 H 0.074 0.926 26 H 0.068 0.932 27 H 0.072 0.928 28 H 0.076 0.924 29 H 0.087 0.913 30 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.541 -11.244 0.165 12.536 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.111 5.111 3 C -0.430 4.430 4 H 0.138 0.862 5 C -0.155 4.155 6 N -0.484 5.484 7 Si 0.714 3.286 8 H -0.200 1.200 9 H -0.211 1.211 10 H -0.187 1.187 11 C 0.170 3.830 12 N -0.280 5.280 13 C 0.113 3.887 14 Cl 0.020 6.980 15 N -0.315 5.315 16 C 0.052 3.948 17 C -0.314 4.314 18 C -0.100 4.100 19 C -0.155 4.155 20 C -0.101 4.101 21 H 0.084 0.916 22 H 0.098 0.902 23 H 0.079 0.921 24 H 0.090 0.910 25 H 0.092 0.908 26 H 0.086 0.914 27 H 0.091 0.909 28 H 0.095 0.905 29 H 0.105 0.895 30 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -4.628 -10.669 0.108 11.630 hybrid contribution -1.141 0.277 -0.702 1.368 sum -5.769 -10.391 -0.595 11.900 Atomic orbital electron populations 1.22430 0.81164 1.02879 1.01442 1.42628 1.03414 1.02998 1.62075 1.19423 1.06238 0.83347 1.34014 0.86160 1.25429 0.98273 0.94834 0.96956 1.69747 1.41537 0.97864 1.39225 0.86887 0.80978 0.79070 0.81713 1.20018 1.21147 1.18713 1.17745 0.86663 0.85077 0.93470 1.67329 1.07205 1.28767 1.24739 1.22065 0.87988 0.84730 0.93967 1.98356 1.04830 1.98442 1.96420 1.66879 1.09790 1.28127 1.26749 1.21299 0.88124 0.94840 0.90498 1.20992 0.97608 0.93906 1.18934 1.20945 0.91940 0.96010 1.01112 1.22402 0.96259 0.95719 1.01160 1.20949 0.92207 0.94515 1.02409 0.91618 0.90234 0.92099 0.91049 0.90759 0.91351 0.90907 0.90549 0.89512 0.90156 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 1.22 6.71 59.85 0.40 1.62 16 2 N -0.42 -9.93 2.81 -122.23 -0.34 -10.27 16 3 C -0.30 -8.11 9.57 -15.04 -0.14 -8.25 16 4 H 0.12 3.62 7.78 -52.49 -0.41 3.21 16 5 C 0.05 1.39 5.28 -17.45 -0.09 1.30 16 6 N -0.85 -23.41 13.96 55.49 0.77 -22.64 16 7 Si 0.89 19.53 24.48 -169.99 -4.16 15.37 16 8 H -0.27 -5.52 6.69 56.52 0.38 -5.14 16 9 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 10 H -0.26 -5.78 6.70 56.52 0.38 -5.41 16 11 C 0.42 9.67 7.35 -154.72 -1.14 8.54 16 12 N -0.55 -13.51 9.47 -10.87 -0.10 -13.62 16 13 C 0.41 9.09 8.17 -92.01 -0.75 8.33 16 14 Cl -0.01 -0.15 29.26 -51.86 -1.52 -1.67 16 15 N -0.59 -12.27 10.40 -7.82 -0.08 -12.35 16 16 C 0.19 3.58 7.36 -82.07 -0.60 2.97 16 17 C -0.30 -5.85 5.93 -104.02 -0.62 -6.47 16 18 C -0.06 -0.90 4.74 -26.96 -0.13 -1.02 16 19 C -0.12 -1.34 7.11 -25.03 -0.18 -1.51 16 20 C -0.06 -0.83 6.78 -26.69 -0.18 -1.01 16 21 H 0.07 1.07 6.20 -51.93 -0.32 0.75 16 22 H 0.08 1.57 3.78 -51.93 -0.20 1.38 16 23 H 0.06 1.05 6.02 -51.93 -0.31 0.74 16 24 H 0.28 7.08 8.31 -40.82 -0.34 6.74 16 25 H 0.07 1.02 5.57 -51.93 -0.29 0.73 16 26 H 0.07 0.93 7.52 -51.93 -0.39 0.54 16 27 H 0.07 0.78 8.14 -51.93 -0.42 0.35 16 28 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 29 H 0.09 1.03 8.14 -51.93 -0.42 0.61 16 30 H 0.08 0.97 8.14 -51.93 -0.42 0.54 16 LS Contribution 257.67 15.07 3.88 3.88 Total: -1.00 -29.69 257.67 -7.77 -37.46 By element: Atomic # 1 Polarization: 2.13 SS G_CDS: -2.79 Total: -0.67 kcal Atomic # 6 Polarization: 7.92 SS G_CDS: -3.43 Total: 4.49 kcal Atomic # 7 Polarization: -59.12 SS G_CDS: 0.25 Total: -58.87 kcal Atomic # 14 Polarization: 19.53 SS G_CDS: -4.16 Total: 15.37 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -1.52 Total: -1.67 kcal Total LS contribution 3.88 Total: 3.88 kcal Total: -29.69 -7.77 -37.46 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001166798996.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.224 kcal (2) G-P(sol) polarization free energy of solvation -29.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.771 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.464 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds