Wall clock time and date at job start Mon Mar 30 2020 00:04:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 N 1.46501 * 109.46806 * 2 1 4 4 C 1.36793 * 120.00084 * 278.05124 * 3 2 1 5 5 H 1.07992 * 120.00269 * 179.69034 * 4 3 2 6 6 C 1.39108 * 119.99700 * 359.70053 * 4 3 2 7 7 N 1.31323 * 120.00120 * 11.50478 * 6 4 3 8 8 Si 1.86800 * 119.99807 * 191.50490 * 6 4 3 9 9 H 1.48502 * 109.47467 * 0.02562 * 8 6 4 10 10 H 1.48505 * 109.46915 * 119.99983 * 8 6 4 11 11 H 1.48504 * 109.47206 * 239.99682 * 8 6 4 12 12 C 1.34775 * 120.00087 * 98.06064 * 3 2 1 13 13 O 1.21563 * 119.99836 * 186.07235 * 12 3 2 14 14 C 1.47994 * 120.00176 * 6.06669 * 12 3 2 15 15 C 1.39971 * 120.91912 * 315.42083 * 14 12 3 16 16 C 1.38036 * 119.02267 * 180.02562 * 15 14 12 17 17 N 1.31879 * 120.92918 * 0.02562 * 16 15 14 18 18 C 1.31915 * 122.04466 * 359.72392 * 17 16 15 19 19 Cl 1.73595 * 119.56709 * 180.27330 * 18 17 16 20 20 C 1.38305 * 120.86777 * 0.53942 * 18 17 16 21 21 H 1.09006 * 109.47714 * 69.00843 * 1 2 3 22 22 H 1.09003 * 109.47213 * 189.00817 * 1 2 3 23 23 H 1.09006 * 109.47490 * 309.00896 * 1 2 3 24 24 H 1.08998 * 109.47229 * 240.00080 * 2 1 3 25 25 H 1.08999 * 109.46919 * 119.99533 * 2 1 3 26 26 H 0.97001 * 119.99661 * 180.02562 * 7 6 4 27 27 H 1.07999 * 120.48494 * 0.02562 * 15 14 12 28 28 H 1.07999 * 119.53901 * 179.97438 * 16 15 14 29 29 H 1.08001 * 120.51206 * 179.75069 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0182 1.3812 0.0000 4 6 2.0898 2.0814 -1.1730 5 1 2.4449 3.1013 -1.1723 6 6 1.7047 1.4798 -2.3667 7 7 1.0655 0.3328 -2.3476 8 14 2.0971 2.3034 -3.9967 9 1 2.8188 3.5770 -3.7469 10 1 2.9506 1.4034 -4.8133 11 1 0.8343 2.5843 -4.7260 12 6 2.3971 1.9621 1.1556 13 8 2.6970 3.1400 1.1741 14 6 2.4480 1.1659 2.4021 15 6 1.4099 0.2894 2.7386 16 6 1.4975 -0.4337 3.9111 17 7 2.5397 -0.3072 4.7092 18 6 3.5420 0.5031 4.4285 19 17 4.8857 0.6143 5.5219 20 6 3.5338 1.2694 3.2771 21 1 -0.3635 0.3681 -0.9595 22 1 -0.3634 -1.0150 0.1609 23 1 -0.3634 0.6469 0.7986 24 1 1.8933 -0.5138 -0.8900 25 1 1.8933 -0.5138 0.8900 26 1 0.7974 -0.0869 -3.1800 27 1 0.5529 0.1806 2.0904 28 1 0.7010 -1.1121 4.1790 29 1 4.3557 1.9340 3.0549 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068241238.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:04:31 Heat of formation + Delta-G solvation = 22.885064 kcal Electronic energy + Delta-G solvation = -16576.200727 eV Core-core repulsion = 13719.644102 eV Total energy + Delta-G solvation = -2856.556625 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 254.056 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.23714 -38.33597 -36.45394 -35.41789 -32.73074 -31.59718 -30.79785 -29.58528 -25.84446 -23.65927 -23.23829 -22.24296 -19.89005 -17.41171 -16.85803 -16.35411 -15.93929 -15.31220 -14.60266 -14.29711 -14.11395 -13.87720 -13.62469 -13.03277 -12.57209 -12.06623 -11.62822 -11.48901 -11.28840 -11.25051 -11.15056 -10.89053 -10.46624 -10.35927 -10.20870 -9.61287 -9.45230 -9.07024 -8.73475 -8.60527 -8.01224 -6.46927 -4.00762 1.11521 1.20826 1.94672 3.00981 3.13594 3.20392 3.54483 3.88868 4.05651 4.48796 4.72935 4.91933 5.15720 5.18414 5.27847 5.53507 5.83396 5.98036 6.06680 6.37281 6.48942 6.53408 6.62059 6.68861 7.17050 7.39435 7.63096 7.83369 7.87318 8.28682 8.93518 9.16429 9.71922 10.39042 Molecular weight = 254.06amu Principal moments of inertia in cm(-1) A = 0.036286 B = 0.006008 C = 0.005431 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 771.463770 B = 4659.195872 C = 5154.453779 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.101 3.899 3 N -0.417 5.417 4 C -0.290 4.290 5 H 0.110 0.890 6 C 0.025 3.975 7 N -0.864 5.864 8 Si 0.935 3.065 9 H -0.266 1.266 10 H -0.278 1.278 11 H -0.279 1.279 12 C 0.458 3.542 13 O -0.587 6.587 14 C -0.029 4.029 15 C -0.161 4.161 16 C 0.108 3.892 17 N -0.485 5.485 18 C 0.168 3.832 19 Cl -0.042 7.042 20 C -0.120 4.120 21 H 0.101 0.899 22 H 0.039 0.961 23 H 0.026 0.974 24 H 0.121 0.879 25 H 0.039 0.961 26 H 0.269 0.731 27 H 0.160 0.840 28 H 0.165 0.835 29 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.346 -4.460 6.365 7.780 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.022 4.022 3 N -0.132 5.132 4 C -0.418 4.418 5 H 0.128 0.872 6 C -0.178 4.178 7 N -0.505 5.505 8 Si 0.761 3.239 9 H -0.190 1.190 10 H -0.204 1.204 11 H -0.205 1.205 12 C 0.247 3.753 13 O -0.473 6.473 14 C -0.041 4.041 15 C -0.181 4.181 16 C -0.049 4.049 17 N -0.197 5.197 18 C 0.004 3.996 19 Cl -0.014 7.014 20 C -0.142 4.142 21 H 0.119 0.881 22 H 0.058 0.942 23 H 0.044 0.956 24 H 0.138 0.862 25 H 0.057 0.943 26 H 0.081 0.919 27 H 0.177 0.823 28 H 0.182 0.818 29 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 0.557 -4.493 7.025 8.357 hybrid contribution 0.114 0.594 -1.326 1.458 sum 0.671 -3.899 5.699 6.937 Atomic orbital electron populations 1.22348 0.96316 0.98868 1.03353 1.22137 0.94980 0.83160 1.01906 1.43814 1.51594 1.12129 1.05689 1.19994 1.40107 0.99029 0.82689 0.87178 1.25394 0.95728 0.96519 1.00130 1.70056 1.35730 1.17180 1.27527 0.85702 0.78433 0.79357 0.80372 1.19048 1.20390 1.20518 1.17561 0.87793 0.87304 0.82679 1.90638 1.56426 1.15284 1.84995 1.20695 0.93255 0.94316 0.95875 1.23101 1.00679 0.96023 0.98302 1.22530 0.94564 0.97792 0.89970 1.66790 1.01097 1.18650 1.33191 1.21385 0.91002 0.96331 0.90868 1.98375 1.42010 1.96992 1.64037 1.21831 0.99891 0.99681 0.92778 0.88071 0.94177 0.95558 0.86182 0.94339 0.91947 0.82309 0.81830 0.83524 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.92 8.57 37.16 0.32 -2.60 15 2 C 0.10 2.12 4.89 -4.04 -0.02 2.10 15 3 N -0.42 -10.13 2.64 -115.84 -0.31 -10.44 15 4 C -0.29 -7.53 9.50 -15.02 -0.14 -7.68 15 5 H 0.11 3.03 7.19 -52.49 -0.38 2.65 15 6 C 0.02 0.59 5.34 -17.45 -0.09 0.50 15 7 N -0.86 -20.06 7.25 55.50 0.40 -19.66 15 8 Si 0.94 19.18 29.57 -169.99 -5.03 14.15 15 9 H -0.27 -5.58 7.11 56.52 0.40 -5.18 15 10 H -0.28 -5.64 7.11 56.52 0.40 -5.24 15 11 H -0.28 -5.68 7.11 56.52 0.40 -5.27 15 12 C 0.46 11.08 7.28 -12.26 -0.09 11.00 15 13 O -0.59 -16.18 16.59 5.31 0.09 -16.09 15 14 C -0.03 -0.59 5.14 -104.65 -0.54 -1.13 15 15 C -0.16 -2.70 7.51 -39.01 -0.29 -2.99 15 16 C 0.11 1.59 11.17 -17.61 -0.20 1.39 15 17 N -0.49 -7.98 10.31 -10.42 -0.11 -8.09 15 18 C 0.17 2.82 7.27 -17.49 -0.13 2.69 15 19 Cl -0.04 -0.61 29.10 -51.86 -1.51 -2.12 15 20 C -0.12 -2.19 9.58 -38.96 -0.37 -2.56 15 21 H 0.10 2.22 5.88 -51.93 -0.31 1.92 15 22 H 0.04 0.65 8.14 -51.93 -0.42 0.23 15 23 H 0.03 0.49 6.50 -51.93 -0.34 0.15 15 24 H 0.12 2.74 5.74 -51.93 -0.30 2.44 15 25 H 0.04 0.73 4.98 -51.93 -0.26 0.47 15 26 H 0.27 5.91 8.31 -40.82 -0.34 5.57 15 27 H 0.16 2.57 3.84 -52.49 -0.20 2.37 15 28 H 0.16 1.78 8.06 -52.49 -0.42 1.36 15 29 H 0.15 2.61 8.06 -52.49 -0.42 2.19 15 LS Contribution 259.72 15.07 3.91 3.91 Total: -1.00 -27.65 259.72 -6.28 -33.93 By element: Atomic # 1 Polarization: 5.85 SS G_CDS: -2.18 Total: 3.67 kcal Atomic # 6 Polarization: 2.29 SS G_CDS: -1.55 Total: 0.73 kcal Atomic # 7 Polarization: -38.17 SS G_CDS: -0.01 Total: -38.18 kcal Atomic # 8 Polarization: -16.18 SS G_CDS: 0.09 Total: -16.09 kcal Atomic # 14 Polarization: 19.18 SS G_CDS: -5.03 Total: 14.15 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.51 Total: -2.12 kcal Total LS contribution 3.91 Total: 3.91 kcal Total: -27.65 -6.28 -33.93 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068241238.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.813 kcal (2) G-P(sol) polarization free energy of solvation -27.648 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.280 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.928 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.885 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds