Wall clock time and date at job start Mon Mar 30 2020 00:04:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 N 1.46495 * 109.47174 * 2 1 4 4 C 1.36787 * 119.99868 * 264.46145 * 3 2 1 5 5 H 1.07997 * 120.00009 * 132.00699 * 4 3 2 6 6 C 1.39112 * 120.00355 * 312.00084 * 4 3 2 7 7 N 1.31326 * 119.99561 * 3.27529 * 6 4 3 8 8 Si 1.86793 * 120.00312 * 183.27488 * 6 4 3 9 9 H 1.48495 * 109.47566 * 90.00026 * 8 6 4 10 10 H 1.48503 * 109.47111 * 210.00407 * 8 6 4 11 11 H 1.48505 * 109.46790 * 329.99748 * 8 6 4 12 12 C 1.34767 * 120.00152 * 84.46880 * 3 2 1 13 13 O 1.21567 * 120.00422 * 4.81988 * 12 3 2 14 14 C 1.48013 * 120.00147 * 184.82761 * 12 3 2 15 15 C 1.39366 * 119.72326 * 174.16916 * 14 12 3 16 16 C 1.38697 * 119.02975 * 179.70016 * 15 14 12 17 17 Cl 1.73605 * 120.76345 * 180.25729 * 16 15 14 18 18 C 1.38808 * 118.47220 * 0.28052 * 16 15 14 19 19 C 1.38482 * 119.35598 * 359.97438 * 18 16 15 20 20 N 1.31560 * 120.92500 * 0.02562 * 19 18 16 21 21 H 1.08998 * 109.47307 * 179.97438 * 1 2 3 22 22 H 1.08997 * 109.46730 * 299.99986 * 1 2 3 23 23 H 1.09000 * 109.47007 * 59.99628 * 1 2 3 24 24 H 1.08997 * 109.46730 * 240.00014 * 2 1 3 25 25 H 1.09000 * 109.47007 * 120.00372 * 2 1 3 26 26 H 0.97002 * 119.99767 * 179.97438 * 7 6 4 27 27 H 1.07992 * 120.48317 * 359.97438 * 15 14 12 28 28 H 1.08004 * 120.32362 * 179.97438 * 18 16 15 29 29 H 1.07997 * 119.53689 * 179.97438 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.3541 1.9878 -1.1791 5 1 1.9867 2.9790 -1.4002 6 6 3.1690 1.3282 -2.0935 7 7 3.5632 0.0986 -1.8540 8 14 3.7023 2.1912 -3.6619 9 1 4.9784 2.9116 -3.4211 10 1 3.8964 1.1867 -4.7382 11 1 2.6561 3.1615 -4.0732 12 6 2.1369 2.0540 1.1617 13 8 1.9229 1.4885 2.2163 14 6 2.5276 3.4816 1.1535 15 6 2.5304 4.2040 2.3453 16 6 2.9049 5.5393 2.3221 17 17 2.9309 6.4797 3.7811 18 6 3.2580 6.1065 1.1054 19 6 3.2270 5.3293 -0.0404 20 7 2.8677 4.0647 0.0099 21 1 -0.3634 -1.0276 -0.0005 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 1.8933 -0.5138 -0.8900 25 1 1.8933 -0.5139 0.8900 26 1 4.1310 -0.3616 -2.4917 27 1 2.2493 3.7299 3.2740 28 1 3.5541 7.1438 1.0528 29 1 3.5007 5.7677 -0.9887 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068241254.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:04:11 Heat of formation + Delta-G solvation = 10.256761 kcal Electronic energy + Delta-G solvation = -16580.020563 eV Core-core repulsion = 13722.916333 eV Total energy + Delta-G solvation = -2857.104230 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 254.056 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -39.96736 -38.06188 -36.51915 -35.01978 -31.91025 -31.77948 -31.04910 -29.50075 -25.02778 -24.16969 -23.10288 -21.78787 -19.45769 -18.05731 -16.44969 -15.99940 -15.57032 -14.91452 -14.55512 -14.17064 -14.12143 -13.46556 -13.33845 -12.91962 -12.56891 -12.03425 -11.91878 -11.67682 -11.59332 -11.13361 -10.97168 -10.82670 -10.66779 -10.30559 -9.88105 -9.23919 -9.16852 -8.99924 -8.79824 -8.37257 -7.37288 -6.29776 -4.04428 1.11466 1.44113 2.08917 3.16670 3.23733 3.26843 3.59965 4.11307 4.45886 4.56595 4.85360 5.06836 5.12747 5.33170 5.39852 5.87759 5.97115 6.13105 6.19180 6.26201 6.40618 6.49178 6.80933 6.89294 7.08760 7.41781 7.67240 7.99912 8.34817 8.54630 9.09263 9.40722 9.85525 10.69524 Molecular weight = 254.06amu Principal moments of inertia in cm(-1) A = 0.022974 B = 0.007871 C = 0.006161 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1218.457782 B = 3556.413452 C = 4543.729812 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.158 4.158 2 C 0.101 3.899 3 N -0.405 5.405 4 C -0.297 4.297 5 H 0.115 0.885 6 C 0.039 3.961 7 N -0.873 5.873 8 Si 0.926 3.074 9 H -0.277 1.277 10 H -0.287 1.287 11 H -0.268 1.268 12 C 0.502 3.498 13 O -0.601 6.601 14 C 0.131 3.869 15 C -0.125 4.125 16 C -0.005 4.005 17 Cl -0.069 7.069 18 C -0.171 4.171 19 C 0.096 3.904 20 N -0.407 5.407 21 H 0.049 0.951 22 H 0.043 0.957 23 H 0.051 0.949 24 H 0.118 0.882 25 H 0.053 0.947 26 H 0.269 0.731 27 H 0.149 0.851 28 H 0.137 0.863 29 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.921 9.282 2.119 9.566 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.216 4.216 2 C -0.022 4.022 3 N -0.120 5.120 4 C -0.426 4.426 5 H 0.132 0.868 6 C -0.165 4.165 7 N -0.511 5.511 8 Si 0.753 3.247 9 H -0.202 1.202 10 H -0.213 1.213 11 H -0.193 1.193 12 C 0.291 3.709 13 O -0.488 6.488 14 C -0.007 4.007 15 C -0.147 4.147 16 C -0.039 4.039 17 Cl -0.040 7.040 18 C -0.193 4.193 19 C -0.063 4.063 20 N -0.118 5.118 21 H 0.068 0.932 22 H 0.062 0.938 23 H 0.070 0.930 24 H 0.136 0.864 25 H 0.072 0.928 26 H 0.080 0.920 27 H 0.167 0.833 28 H 0.155 0.845 29 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -0.955 8.354 1.870 8.614 hybrid contribution 0.497 1.087 0.092 1.199 sum -0.458 9.441 1.962 9.653 Atomic orbital electron populations 1.22083 0.98209 1.00283 1.01041 1.21654 0.91524 0.84666 1.04333 1.43472 1.51807 1.11601 1.05091 1.20059 1.27155 1.01957 0.93479 0.86820 1.25614 0.95459 0.95488 0.99967 1.69686 1.33805 1.10848 1.36798 0.85941 0.79376 0.78983 0.80392 1.20244 1.21279 1.19251 1.18021 0.83184 0.85105 0.84630 1.90632 1.58078 1.68907 1.31181 1.21557 0.95693 0.95762 0.87732 1.22027 0.99745 0.91955 1.00953 1.21099 1.02321 0.92500 0.88020 1.98357 1.97040 1.72429 1.36160 1.22156 1.03204 1.01922 0.92018 1.23180 0.95183 0.90324 0.97618 1.68897 1.06793 1.09143 1.26974 0.93177 0.93791 0.92989 0.86393 0.92803 0.92017 0.83310 0.84465 0.82190 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.23 10.20 37.16 0.38 -2.86 15 2 C 0.10 2.43 5.60 -4.04 -0.02 2.41 15 3 N -0.40 -10.35 2.51 -115.84 -0.29 -10.64 15 4 C -0.30 -7.50 7.47 -15.02 -0.11 -7.61 15 5 H 0.11 2.81 5.96 -52.49 -0.31 2.50 15 6 C 0.04 0.99 5.35 -17.44 -0.09 0.89 15 7 N -0.87 -22.95 10.99 55.50 0.61 -22.34 15 8 Si 0.93 19.63 29.55 -169.99 -5.02 14.61 15 9 H -0.28 -5.88 7.11 56.52 0.40 -5.47 15 10 H -0.29 -6.08 7.11 56.52 0.40 -5.68 15 11 H -0.27 -5.48 7.11 56.52 0.40 -5.08 15 12 C 0.50 12.69 7.57 -12.26 -0.09 12.60 15 13 O -0.60 -16.07 15.98 5.31 0.08 -15.98 15 14 C 0.13 2.88 6.66 -83.02 -0.55 2.32 15 15 C -0.12 -2.34 9.45 -38.99 -0.37 -2.71 15 16 C -0.01 -0.08 6.37 -39.20 -0.25 -0.33 15 17 Cl -0.07 -0.92 29.02 -51.86 -1.50 -2.42 15 18 C -0.17 -2.43 9.94 -39.28 -0.39 -2.83 15 19 C 0.10 1.54 11.18 -17.58 -0.20 1.34 15 20 N -0.41 -8.41 6.36 -9.83 -0.06 -8.47 15 21 H 0.05 0.88 8.14 -51.93 -0.42 0.46 15 22 H 0.04 0.91 8.14 -51.93 -0.42 0.49 15 23 H 0.05 1.05 8.14 -51.93 -0.42 0.62 15 24 H 0.12 2.98 5.51 -51.93 -0.29 2.70 15 25 H 0.05 1.34 7.53 -51.93 -0.39 0.95 15 26 H 0.27 6.71 8.31 -40.82 -0.34 6.37 15 27 H 0.15 2.77 7.65 -52.49 -0.40 2.37 15 28 H 0.14 1.49 8.06 -52.48 -0.42 1.07 15 29 H 0.16 2.04 8.06 -52.49 -0.42 1.62 15 LS Contribution 271.02 15.07 4.08 4.08 Total: -1.00 -28.59 271.02 -6.44 -35.04 By element: Atomic # 1 Polarization: 5.55 SS G_CDS: -2.64 Total: 2.91 kcal Atomic # 6 Polarization: 4.93 SS G_CDS: -1.70 Total: 3.23 kcal Atomic # 7 Polarization: -41.71 SS G_CDS: 0.26 Total: -41.45 kcal Atomic # 8 Polarization: -16.07 SS G_CDS: 0.08 Total: -15.98 kcal Atomic # 14 Polarization: 19.63 SS G_CDS: -5.02 Total: 14.61 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.50 Total: -2.42 kcal Total LS contribution 4.08 Total: 4.08 kcal Total: -28.59 -6.44 -35.04 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068241254.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.293 kcal (2) G-P(sol) polarization free energy of solvation -28.594 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.700 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.443 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.037 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.257 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds