Wall clock time and date at job start Sun Mar 29 2020 23:51:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38605 * 120.78346 * 2 1 4 4 C 1.38357 * 119.15093 * 180.02562 * 3 2 1 5 5 Cl 1.73599 * 119.63108 * 179.97438 * 4 3 2 6 6 N 1.31977 * 120.73312 * 0.02562 * 4 3 2 7 7 C 1.31879 * 121.70492 * 359.97438 * 6 4 3 8 8 C 1.50706 * 119.60537 * 179.97438 * 7 6 4 9 9 N 1.46498 * 109.46996 * 274.99844 * 8 7 6 10 10 C 1.34774 * 119.99768 * 180.02562 * 9 8 7 11 11 O 1.21696 * 120.00194 * 0.02562 * 10 9 8 12 12 C 1.46375 * 120.00195 * 180.02562 * 10 9 8 13 13 H 1.08005 * 120.00024 * 359.97438 * 12 10 9 14 14 C 1.40050 * 120.00197 * 180.02562 * 12 10 9 15 15 N 1.30667 * 119.99948 * 359.97438 * 14 12 10 16 16 Si 1.86806 * 119.99930 * 179.97438 * 14 12 10 17 17 H 1.48502 * 109.47121 * 359.97438 * 16 14 12 18 18 H 1.48497 * 109.47024 * 119.99861 * 16 14 12 19 19 H 1.48503 * 109.46894 * 240.00131 * 16 14 12 20 20 C 1.38179 * 120.78354 * 0.25776 * 7 6 4 21 21 H 1.09002 * 109.47391 * 89.99622 * 1 2 3 22 22 H 1.09000 * 109.47008 * 210.00131 * 1 2 3 23 23 H 1.08999 * 109.46544 * 329.99800 * 1 2 3 24 24 H 1.07995 * 120.42524 * 0.02562 * 3 2 1 25 25 H 1.09000 * 109.47292 * 35.00651 * 8 7 6 26 26 H 1.09001 * 109.46828 * 155.00248 * 8 7 6 27 27 H 0.97003 * 120.00250 * 0.02562 * 9 8 7 28 28 H 0.97000 * 119.99627 * 180.02562 * 15 14 12 29 29 H 1.07997 * 120.40632 * 179.72041 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2164 1.1908 0.0000 4 6 3.5994 1.1514 -0.0005 5 17 4.5003 2.6353 -0.0012 6 7 4.2413 -0.0018 -0.0016 7 6 3.5980 -1.1531 -0.0016 8 6 4.3787 -2.4422 -0.0034 9 7 4.7330 -2.7966 -1.3800 10 6 5.4370 -3.9190 -1.6269 11 8 5.7780 -4.6383 -0.7064 12 6 5.7916 -4.2729 -3.0023 13 1 5.4886 -3.6347 -3.8193 14 6 6.5227 -5.4395 -3.2589 15 7 6.8888 -6.2118 -2.2705 16 14 6.9745 -5.8914 -5.0143 17 1 6.4452 -4.8604 -5.9427 18 1 8.4522 -5.9619 -5.1425 19 1 6.3846 -7.2115 -5.3529 20 6 2.2167 -1.1914 -0.0059 21 1 -0.3634 0.0001 -1.0277 22 1 -0.3633 -0.8900 0.5139 23 1 -0.3632 0.8900 0.5139 24 1 1.6963 2.1372 0.0004 25 1 5.2876 -2.3173 0.5852 26 1 3.7707 -3.2357 0.4311 27 1 4.4609 -2.2234 -2.1137 28 1 7.3955 -7.0196 -2.4483 29 1 1.6962 -2.1376 -0.0105 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000282068292.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:51:49 Heat of formation + Delta-G solvation = -20.897624 kcal Electronic energy + Delta-G solvation = -15607.703134 eV Core-core repulsion = 12749.247949 eV Total energy + Delta-G solvation = -2858.455185 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 254.056 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.45754 -37.28109 -36.68521 -34.44922 -33.38499 -32.35655 -30.82078 -28.14591 -27.09770 -25.19363 -23.13271 -21.21477 -19.68739 -17.44851 -17.00822 -16.40291 -15.73159 -15.34106 -14.91086 -14.33875 -13.93648 -13.50368 -13.32736 -13.16628 -12.79808 -12.73215 -12.23766 -11.71405 -11.54988 -11.44469 -11.28738 -11.11415 -10.91957 -10.47218 -10.19784 -9.66872 -9.57975 -9.00188 -8.85810 -7.62572 -7.55267 -6.18901 -4.64012 0.85037 1.04709 1.75444 3.13930 3.22016 3.26674 3.50255 4.12078 4.26555 4.43695 4.58768 4.79130 4.86443 4.97597 5.08048 5.28391 5.33248 5.44851 5.58955 5.72062 5.81557 6.07003 6.24121 6.35681 6.50044 7.44044 7.78338 7.88708 8.03449 8.32085 9.02618 9.49538 10.58865 10.76898 Molecular weight = 254.06amu Principal moments of inertia in cm(-1) A = 0.027169 B = 0.004611 C = 0.004341 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1030.341124 B = 6071.121703 C = 6448.683690 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.033 4.033 3 C -0.164 4.164 4 C 0.180 3.820 5 Cl -0.038 7.038 6 N -0.468 5.468 7 C 0.152 3.848 8 C 0.180 3.820 9 N -0.759 5.759 10 C 0.556 3.444 11 O -0.579 6.579 12 C -0.542 4.542 13 H 0.068 0.932 14 C 0.087 3.913 15 N -0.767 5.767 16 Si 0.908 3.092 17 H -0.264 1.264 18 H -0.276 1.276 19 H -0.276 1.276 20 C -0.157 4.157 21 H 0.080 0.920 22 H 0.076 0.924 23 H 0.072 0.928 24 H 0.142 0.858 25 H 0.070 0.930 26 H 0.070 0.930 27 H 0.381 0.619 28 H 0.268 0.732 29 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.363 14.074 2.998 18.972 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.041 4.041 3 C -0.185 4.185 4 C 0.015 3.985 5 Cl -0.010 7.010 6 N -0.180 5.180 7 C 0.015 3.985 8 C 0.055 3.945 9 N -0.416 5.416 10 C 0.361 3.639 11 O -0.462 6.462 12 C -0.579 4.579 13 H 0.086 0.914 14 C -0.133 4.133 15 N -0.396 5.396 16 Si 0.733 3.267 17 H -0.188 1.188 18 H -0.201 1.201 19 H -0.202 1.202 20 C -0.177 4.177 21 H 0.099 0.901 22 H 0.094 0.906 23 H 0.091 0.909 24 H 0.160 0.840 25 H 0.089 0.911 26 H 0.088 0.912 27 H 0.212 0.788 28 H 0.079 0.921 29 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -11.013 13.482 3.767 17.811 hybrid contribution -0.609 0.343 -1.194 1.384 sum -11.622 13.825 2.573 18.244 Atomic orbital electron populations 1.20828 0.89460 1.03564 1.03252 1.20305 0.97047 0.92121 0.94616 1.21645 0.92438 0.99654 1.04768 1.21600 0.88697 0.88652 0.99552 1.98396 1.76672 1.29391 1.96515 1.66884 1.41483 0.97076 1.12564 1.21536 0.91192 0.92855 0.92942 1.19789 0.97836 0.88216 0.88651 1.46133 1.62591 1.28404 1.04444 1.18251 0.76896 0.78239 0.90549 1.90607 1.57334 1.51613 1.46607 1.20889 1.37069 1.08666 0.91311 0.91361 1.25710 0.93961 0.95413 0.98168 1.70028 1.27467 1.10294 1.31818 0.86305 0.78632 0.78848 0.82905 1.18784 1.20128 1.20160 1.22073 0.94699 0.99265 1.01669 0.90127 0.90555 0.90879 0.84036 0.91137 0.91163 0.78777 0.92124 0.83713 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.81 10.06 36.01 0.36 -0.45 15 2 C -0.03 -0.35 5.92 -104.32 -0.62 -0.97 15 3 C -0.16 -1.84 9.59 -39.40 -0.38 -2.22 15 4 C 0.18 2.55 7.27 -17.45 -0.13 2.42 15 5 Cl -0.04 -0.49 29.11 -51.86 -1.51 -2.00 15 6 N -0.47 -7.94 10.25 -6.62 -0.07 -8.01 15 7 C 0.15 2.49 6.15 -82.59 -0.51 1.98 15 8 C 0.18 3.56 5.98 -5.19 -0.03 3.53 15 9 N -0.76 -17.41 5.54 -62.90 -0.35 -17.76 15 10 C 0.56 15.97 7.75 -12.99 -0.10 15.87 15 11 O -0.58 -18.80 15.02 5.19 0.08 -18.72 15 12 C -0.54 -15.47 9.54 -35.63 -0.34 -15.81 15 13 H 0.07 1.80 7.85 -52.48 -0.41 1.39 15 14 C 0.09 2.45 5.50 -17.37 -0.10 2.35 15 15 N -0.77 -23.10 11.83 55.55 0.66 -22.44 15 16 Si 0.91 20.27 29.56 -169.99 -5.02 15.24 15 17 H -0.26 -5.70 7.11 56.52 0.40 -5.29 15 18 H -0.28 -6.05 7.11 56.52 0.40 -5.65 15 19 H -0.28 -6.01 7.11 56.52 0.40 -5.60 15 20 C -0.16 -2.03 9.43 -39.44 -0.37 -2.40 15 21 H 0.08 0.51 8.14 -51.93 -0.42 0.09 15 22 H 0.08 0.48 8.10 -51.93 -0.42 0.06 15 23 H 0.07 0.41 8.10 -51.93 -0.42 -0.01 15 24 H 0.14 1.18 8.06 -52.49 -0.42 0.76 15 25 H 0.07 1.52 8.14 -51.93 -0.42 1.10 15 26 H 0.07 1.35 8.04 -51.93 -0.42 0.93 15 27 H 0.38 7.99 8.44 -40.82 -0.34 7.64 15 28 H 0.27 7.28 8.29 -40.82 -0.34 6.94 15 29 H 0.15 1.65 8.06 -52.49 -0.42 1.22 15 LS Contribution 281.04 15.07 4.24 4.24 Total: -1.00 -34.53 281.04 -7.03 -41.56 By element: Atomic # 1 Polarization: 6.42 SS G_CDS: -2.84 Total: 3.58 kcal Atomic # 6 Polarization: 6.51 SS G_CDS: -2.21 Total: 4.30 kcal Atomic # 7 Polarization: -48.45 SS G_CDS: 0.24 Total: -48.20 kcal Atomic # 8 Polarization: -18.80 SS G_CDS: 0.08 Total: -18.72 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.02 Total: 15.24 kcal Atomic # 17 Polarization: -0.49 SS G_CDS: -1.51 Total: -2.00 kcal Total LS contribution 4.24 Total: 4.24 kcal Total: -34.53 -7.03 -41.56 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000282068292.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 20.664 kcal (2) G-P(sol) polarization free energy of solvation -34.534 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.561 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.898 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds