Wall clock time and date at job start Sun Mar 29 2020 23:29:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.38267 * 119.99601 * 2 1 4 4 C 1.38216 * 120.02599 * 179.72584 * 3 2 1 5 5 C 1.38240 * 120.01429 * 0.54711 * 4 3 2 6 6 C 1.50703 * 120.00679 * 179.74905 * 5 4 3 7 7 C 1.50701 * 109.47064 * 264.72351 * 6 5 4 8 8 O 1.21208 * 119.99902 * 0.02562 * 7 6 5 9 9 O 1.34308 * 119.99862 * 179.97438 * 7 6 5 10 10 C 1.34922 * 117.00061 * 179.97438 * 9 7 6 11 11 H 1.07999 * 119.99785 * 0.02562 * 10 9 7 12 12 C 1.38750 * 120.00381 * 179.97438 * 10 9 7 13 13 N 1.31444 * 119.99695 * 0.02562 * 12 10 9 14 14 Si 1.86801 * 120.00301 * 180.02562 * 12 10 9 15 15 H 1.48502 * 109.46672 * 90.00391 * 14 12 10 16 16 H 1.48496 * 109.47190 * 210.00246 * 14 12 10 17 17 H 1.48500 * 109.46859 * 330.00630 * 14 12 10 18 18 C 1.38328 * 119.98397 * 359.47484 * 5 4 3 19 19 Cl 1.73602 * 120.01166 * 180.27197 * 18 5 4 20 20 C 1.38194 * 119.99153 * 180.02562 * 2 1 3 21 21 H 1.08998 * 109.47166 * 269.98122 * 1 2 3 22 22 H 1.09004 * 109.46889 * 29.97517 * 1 2 3 23 23 H 1.08999 * 109.47506 * 149.97875 * 1 2 3 24 24 H 1.07996 * 119.98317 * 0.02562 * 3 2 1 25 25 H 1.08004 * 119.99282 * 180.30012 * 4 3 2 26 26 H 1.09002 * 109.47152 * 144.72444 * 6 5 4 27 27 H 1.09001 * 109.46980 * 24.72544 * 6 5 4 28 28 H 0.97000 * 119.99943 * 179.97438 * 13 12 10 29 29 H 1.07997 * 120.00645 * 0.02562 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1975 0.0000 4 6 3.5804 1.1982 0.0057 5 6 4.2725 0.0016 0.0000 6 6 5.7796 0.0026 0.0006 7 6 6.2825 -0.1207 -1.4147 8 8 5.4952 -0.2009 -2.3328 9 8 7.6030 -0.1406 -1.6588 10 6 7.9861 -0.2535 -2.9475 11 1 7.2426 -0.3226 -3.7278 12 6 9.3353 -0.2798 -3.2705 13 7 10.2401 -0.1953 -2.3209 14 14 9.8657 -0.4354 -5.0549 15 1 10.0042 0.9182 -5.6498 16 1 11.1698 -1.1423 -5.1238 17 1 8.8445 -1.2056 -5.8094 18 6 3.5815 -1.1967 -0.0004 19 17 4.4500 -2.6999 -0.0004 20 6 2.1978 -1.1969 -0.0005 21 1 -0.3633 -0.0003 1.0276 22 1 -0.3633 0.8902 -0.5135 23 1 -0.3634 -0.8898 -0.5141 24 1 1.6579 2.1326 0.0004 25 1 4.1198 2.1339 0.0106 26 1 6.1433 -0.8391 0.5900 27 1 6.1421 0.9342 0.4352 28 1 11.1833 -0.2140 -2.5467 29 1 1.6577 -2.1322 -0.0014 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000761994934.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:29:40 Heat of formation + Delta-G solvation = -73.574417 kcal Electronic energy + Delta-G solvation = -15937.395274 eV Core-core repulsion = 13044.363100 eV Total energy + Delta-G solvation = -2893.032173 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 254.050 amu Computer time = 0.25 seconds Orbital eigenvalues (eV) -39.69423 -38.60570 -36.24976 -35.24867 -33.47458 -32.08495 -30.63507 -29.68177 -26.02215 -24.65545 -22.71799 -21.30949 -19.81880 -17.66522 -16.49821 -16.16127 -15.94094 -15.23751 -14.52346 -14.42633 -14.25735 -13.82743 -13.69912 -12.85511 -12.70210 -12.58383 -12.10031 -11.84202 -11.58896 -11.41308 -11.19709 -11.08259 -10.99686 -10.51978 -10.39460 -10.28451 -9.75243 -9.01628 -8.68492 -8.52685 -8.35322 -6.35922 -4.03401 1.28235 1.37345 2.38417 3.14738 3.21638 3.27944 3.60098 3.63867 4.05033 4.66703 4.80671 4.84404 5.00794 5.13594 5.21163 5.27024 5.48161 5.52629 5.67085 5.76867 5.87814 5.98568 6.10352 6.28067 6.51565 6.58360 6.79507 6.96273 7.45018 8.01184 8.78085 9.13154 9.92014 10.82349 Molecular weight = 254.05amu Principal moments of inertia in cm(-1) A = 0.034315 B = 0.005334 C = 0.005109 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 815.763976 B = 5247.742915 C = 5479.106726 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.084 4.084 3 C -0.117 4.117 4 C -0.092 4.092 5 C -0.051 4.051 6 C -0.075 4.075 7 C 0.405 3.595 8 O -0.546 6.546 9 O -0.216 6.216 10 C -0.379 4.379 11 H 0.095 0.905 12 C 0.041 3.959 13 N -0.867 5.867 14 Si 0.941 3.059 15 H -0.274 1.274 16 H -0.278 1.278 17 H -0.267 1.267 18 C -0.014 4.014 19 Cl -0.065 7.065 20 C -0.113 4.113 21 H 0.070 0.930 22 H 0.067 0.933 23 H 0.066 0.934 24 H 0.126 0.874 25 H 0.131 0.869 26 H 0.105 0.895 27 H 0.104 0.896 28 H 0.268 0.732 29 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.766 0.545 7.264 16.465 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.084 4.084 3 C -0.135 4.135 4 C -0.110 4.110 5 C -0.051 4.051 6 C -0.112 4.112 7 C 0.251 3.749 8 O -0.443 6.443 9 O -0.123 6.123 10 C -0.455 4.455 11 H 0.112 0.888 12 C -0.162 4.162 13 N -0.505 5.505 14 Si 0.766 3.234 15 H -0.199 1.199 16 H -0.204 1.204 17 H -0.191 1.191 18 C -0.041 4.041 19 Cl -0.036 7.036 20 C -0.132 4.132 21 H 0.088 0.912 22 H 0.086 0.914 23 H 0.085 0.915 24 H 0.144 0.856 25 H 0.149 0.851 26 H 0.123 0.877 27 H 0.122 0.878 28 H 0.078 0.922 29 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -14.635 0.379 7.038 16.244 hybrid contribution 0.479 -0.223 -0.888 1.034 sum -14.155 0.156 6.150 15.434 Atomic orbital electron populations 1.20754 0.90791 1.02903 1.02225 1.19777 0.96090 0.92523 1.00057 1.21020 0.93956 0.97599 1.00971 1.20983 0.94114 0.97130 0.98753 1.19292 0.94879 0.91835 0.99139 1.20143 0.90596 1.05691 0.94805 1.22795 0.82916 0.78819 0.90405 1.90573 1.57033 1.50211 1.46461 1.83870 1.21699 1.75549 1.31220 1.21201 0.92026 1.51625 0.80693 0.88775 1.25309 0.94515 0.96403 1.00020 1.69995 1.01165 1.46888 1.32421 0.85703 0.78245 0.78716 0.80715 1.19932 1.20361 1.19145 1.20760 0.92275 0.87009 1.04013 1.98372 1.76807 1.31715 1.96695 1.20816 0.91668 0.98527 1.02193 0.91173 0.91400 0.91498 0.85628 0.85092 0.87702 0.87804 0.92176 0.85248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.96 10.01 36.00 0.36 -0.60 15 2 C -0.08 -1.04 5.88 -104.63 -0.62 -1.66 15 3 C -0.12 -1.49 9.70 -39.58 -0.38 -1.87 15 4 C -0.09 -1.36 9.68 -39.59 -0.38 -1.74 15 5 C -0.05 -0.87 4.38 -104.59 -0.46 -1.33 15 6 C -0.07 -1.41 5.46 -29.03 -0.16 -1.57 15 7 C 0.40 10.19 7.90 36.01 0.28 10.48 15 8 O -0.55 -14.97 15.27 -19.05 -0.29 -15.27 15 9 O -0.22 -6.31 9.75 -20.70 -0.20 -6.51 15 10 C -0.38 -11.46 9.65 30.92 0.30 -11.16 15 11 H 0.09 2.87 6.86 -52.49 -0.36 2.51 15 12 C 0.04 1.18 5.49 -17.53 -0.10 1.08 15 13 N -0.87 -25.84 13.67 55.48 0.76 -25.08 15 14 Si 0.94 21.78 29.55 -169.99 -5.02 16.76 15 15 H -0.27 -6.13 7.11 56.52 0.40 -5.73 15 16 H -0.28 -6.19 7.11 56.52 0.40 -5.78 15 17 H -0.27 -6.10 7.11 56.52 0.40 -5.70 15 18 C -0.01 -0.23 6.31 -39.50 -0.25 -0.48 15 19 Cl -0.06 -1.11 27.40 -51.86 -1.42 -2.53 15 20 C -0.11 -1.59 9.49 -39.55 -0.38 -1.96 15 21 H 0.07 0.52 8.14 -51.93 -0.42 0.09 15 22 H 0.07 0.52 8.09 -51.93 -0.42 0.10 15 23 H 0.07 0.54 8.09 -51.93 -0.42 0.12 15 24 H 0.13 1.23 8.06 -52.49 -0.42 0.81 15 25 H 0.13 1.71 8.06 -52.48 -0.42 1.28 15 26 H 0.10 1.88 7.13 -51.93 -0.37 1.51 15 27 H 0.10 1.69 8.05 -51.93 -0.42 1.27 15 28 H 0.27 7.32 8.31 -40.82 -0.34 6.98 15 29 H 0.13 1.54 8.06 -52.49 -0.42 1.11 15 LS Contribution 279.72 15.07 4.22 4.22 Total: -1.00 -34.07 279.72 -6.55 -40.63 By element: Atomic # 1 Polarization: 1.40 SS G_CDS: -2.81 Total: -1.41 kcal Atomic # 6 Polarization: -9.03 SS G_CDS: -1.78 Total: -10.81 kcal Atomic # 7 Polarization: -25.84 SS G_CDS: 0.76 Total: -25.08 kcal Atomic # 8 Polarization: -21.29 SS G_CDS: -0.49 Total: -21.78 kcal Atomic # 14 Polarization: 21.78 SS G_CDS: -5.02 Total: 16.76 kcal Atomic # 17 Polarization: -1.11 SS G_CDS: -1.42 Total: -2.53 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -34.07 -6.55 -40.63 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000761994934.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.948 kcal (2) G-P(sol) polarization free energy of solvation -34.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.022 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.553 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.627 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.574 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.25 seconds