Wall clock time and date at job start Sun Mar 29 2020 23:50:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50706 * 1 3 3 C 1.38352 * 120.32531 * 2 1 4 4 N 1.31917 * 121.10129 * 179.97438 * 3 2 1 5 5 C 1.31826 * 121.86568 * 359.97438 * 4 3 2 6 6 Cl 1.73594 * 119.74076 * 180.02562 * 5 4 3 7 7 C 1.39713 * 120.52060 * 0.03094 * 5 4 3 8 8 C 1.47761 * 120.56753 * 179.97438 * 7 5 4 9 9 O 1.21558 * 120.00201 * 359.97438 * 8 7 5 10 10 N 1.34778 * 119.99671 * 179.97438 * 8 7 5 11 11 C 1.46507 * 119.99683 * 180.02562 * 10 8 7 12 12 C 1.50695 * 109.47164 * 179.97438 * 11 10 8 13 13 H 1.08006 * 119.99777 * 359.97438 * 12 11 10 14 14 C 1.37880 * 120.00246 * 179.97438 * 12 11 10 15 15 N 1.31510 * 119.99989 * 179.97438 * 14 12 11 16 16 Si 1.86796 * 119.99760 * 0.02562 * 14 12 11 17 17 H 1.48502 * 109.47689 * 89.99793 * 16 14 12 18 18 H 1.48505 * 109.46931 * 210.00128 * 16 14 12 19 19 H 1.48506 * 109.47283 * 329.99444 * 16 14 12 20 20 C 1.38345 * 120.33024 * 179.72135 * 2 1 3 21 21 H 1.09001 * 109.46953 * 89.99825 * 1 2 3 22 22 H 1.09000 * 109.47318 * 209.99423 * 1 2 3 23 23 H 1.09000 * 109.47161 * 330.00054 * 1 2 3 24 24 H 1.07994 * 119.45308 * 0.02562 * 3 2 1 25 25 H 0.96996 * 120.00477 * 359.97438 * 10 8 7 26 26 H 1.09003 * 109.46679 * 299.98995 * 11 10 8 27 27 H 1.08994 * 109.47380 * 59.98846 * 11 10 8 28 28 H 0.96999 * 119.99929 * 180.02562 * 15 14 12 29 29 H 1.08010 * 120.84604 * 359.97438 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.2056 1.1942 0.0000 4 7 3.5247 1.2121 0.0005 5 6 4.2357 0.1020 0.0015 6 17 5.9694 0.1899 0.0028 7 6 3.6050 -1.1446 0.0015 8 6 4.4009 -2.3895 0.0021 9 8 5.6153 -2.3345 0.0021 10 7 3.7805 -3.5860 0.0025 11 6 4.5697 -4.8203 0.0037 12 6 3.6433 -6.0089 0.0046 13 1 2.5736 -5.8598 0.0048 14 6 4.1613 -7.2867 0.0052 15 7 3.3528 -8.3239 0.0066 16 14 6.0113 -7.5445 0.0056 17 1 6.5015 -7.6122 1.4058 18 1 6.3343 -8.8141 -0.6939 19 1 6.6691 -6.4123 -0.6949 20 6 2.2057 -1.1941 0.0058 21 1 -0.3633 0.0000 -1.0277 22 1 -0.3634 -0.8900 0.5137 23 1 -0.3633 0.8900 0.5138 24 1 1.6620 2.1274 0.0004 25 1 2.8115 -3.6299 0.0028 26 1 5.1986 -4.8502 -0.8861 27 1 5.1981 -4.8490 0.8938 28 1 3.7171 -9.2229 0.0074 29 1 1.6849 -2.1403 0.0108 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000879800113.mol2 29 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:50:38 Heat of formation + Delta-G solvation = -7.682411 kcal Electronic energy + Delta-G solvation = -15861.011004 eV Core-core repulsion = 13003.128873 eV Total energy + Delta-G solvation = -2857.882130 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 254.056 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -40.65743 -38.61183 -36.49571 -34.48934 -33.74409 -32.66693 -31.96098 -28.04859 -27.35928 -24.71794 -23.10984 -21.66081 -20.12582 -17.99886 -17.21620 -17.02668 -16.19302 -15.18019 -14.97378 -14.42107 -14.20609 -14.10157 -13.68240 -13.30052 -13.09199 -12.82239 -12.39796 -12.25023 -12.22932 -11.41287 -11.23038 -10.91003 -10.80277 -10.09653 -10.01382 -9.99576 -9.54957 -9.08157 -8.92577 -8.82104 -8.23437 -6.26139 -4.29077 0.47716 0.87693 1.91628 3.02404 3.24425 3.31273 3.39648 3.66175 3.77861 4.29674 4.34056 4.42546 4.58186 4.68696 4.84967 5.09487 5.28057 5.31574 5.38201 5.59871 5.65616 5.91214 6.21631 6.73663 7.00867 7.08588 7.30627 7.47754 8.03168 8.39389 8.66235 8.77898 9.33335 10.85625 Molecular weight = 254.06amu Principal moments of inertia in cm(-1) A = 0.025674 B = 0.005906 C = 0.004818 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1090.344160 B = 4739.890209 C = 5809.787063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 C -0.144 4.144 3 C 0.130 3.870 4 N -0.482 5.482 5 C 0.211 3.789 6 Cl 0.007 6.993 7 C -0.155 4.155 8 C 0.540 3.460 9 O -0.527 6.527 10 N -0.696 5.696 11 C 0.221 3.779 12 C -0.546 4.546 13 H 0.079 0.921 14 C 0.079 3.921 15 N -0.891 5.891 16 Si 0.876 3.124 17 H -0.272 1.272 18 H -0.283 1.283 19 H -0.260 1.260 20 C -0.036 4.036 21 H 0.077 0.923 22 H 0.074 0.926 23 H 0.072 0.928 24 H 0.167 0.833 25 H 0.394 0.606 26 H 0.029 0.971 27 H 0.024 0.976 28 H 0.268 0.732 29 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.469 17.117 -0.048 17.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C -0.146 4.146 3 C -0.028 4.028 4 N -0.192 5.192 5 C 0.046 3.954 6 Cl 0.036 6.964 7 C -0.162 4.162 8 C 0.324 3.676 9 O -0.405 6.405 10 N -0.345 5.345 11 C 0.099 3.901 12 C -0.584 4.584 13 H 0.097 0.903 14 C -0.125 4.125 15 N -0.528 5.528 16 Si 0.702 3.298 17 H -0.198 1.198 18 H -0.209 1.209 19 H -0.184 1.184 20 C -0.062 4.062 21 H 0.096 0.904 22 H 0.093 0.907 23 H 0.091 0.909 24 H 0.184 0.816 25 H 0.229 0.771 26 H 0.047 0.953 27 H 0.042 0.958 28 H 0.078 0.922 29 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -3.979 17.697 -0.050 18.139 hybrid contribution 0.083 -1.087 0.019 1.091 sum -3.896 16.610 -0.031 17.061 Atomic orbital electron populations 1.20747 0.89183 1.03665 1.03088 1.20951 0.98266 0.93600 1.01814 1.22753 0.88314 0.98011 0.93699 1.67157 1.08318 1.29987 1.13751 1.21826 0.89060 0.88518 0.96037 1.98451 1.04002 1.98348 1.95562 1.20905 0.94419 0.94878 1.05986 1.17875 0.87624 0.83213 0.78870 1.90827 1.12870 1.86930 1.49834 1.46117 1.10603 1.05846 1.71912 1.19561 0.92388 0.80974 0.97145 1.21053 0.94551 0.89082 1.53692 0.90259 1.24779 0.98385 0.95596 0.93751 1.69871 1.35137 0.98604 1.49192 0.86823 0.85444 0.78365 0.79127 1.19791 1.20862 1.18390 1.21800 0.92041 0.99367 0.92980 0.90432 0.90672 0.90865 0.81635 0.77132 0.95306 0.95768 0.92189 0.83170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.69 10.03 36.01 0.36 -0.33 15 2 C -0.14 -1.42 5.89 -104.54 -0.62 -2.03 15 3 C 0.13 1.36 10.85 -17.47 -0.19 1.17 15 4 N -0.48 -6.76 10.33 -10.02 -0.10 -6.87 15 5 C 0.21 3.36 7.31 -17.00 -0.12 3.24 15 6 Cl 0.01 0.12 26.20 -51.86 -1.36 -1.24 15 7 C -0.16 -2.46 5.89 -104.79 -0.62 -3.08 15 8 C 0.54 10.51 7.77 -12.37 -0.10 10.41 15 9 O -0.53 -11.77 14.00 5.32 0.07 -11.69 15 10 N -0.70 -13.82 5.50 -62.46 -0.34 -14.17 15 11 C 0.22 5.31 4.50 -5.19 -0.02 5.28 15 12 C -0.55 -14.59 9.83 -34.44 -0.34 -14.93 15 13 H 0.08 2.19 7.84 -52.48 -0.41 1.77 15 14 C 0.08 2.19 5.47 -17.82 -0.10 2.09 15 15 N -0.89 -25.98 13.96 55.43 0.77 -25.20 15 16 Si 0.88 21.11 27.47 -169.99 -4.67 16.44 15 17 H -0.27 -6.49 7.11 56.52 0.40 -6.08 15 18 H -0.28 -6.70 7.11 56.52 0.40 -6.30 15 19 H -0.26 -6.22 6.54 56.52 0.37 -5.85 15 20 C -0.04 -0.43 9.32 -38.88 -0.36 -0.79 15 21 H 0.08 0.43 8.14 -51.93 -0.42 0.01 15 22 H 0.07 0.45 8.09 -51.93 -0.42 0.03 15 23 H 0.07 0.34 8.09 -51.93 -0.42 -0.08 15 24 H 0.17 1.12 8.06 -52.49 -0.42 0.70 15 25 H 0.39 6.73 6.43 -40.82 -0.26 6.47 15 26 H 0.03 0.73 7.20 -51.93 -0.37 0.36 15 27 H 0.02 0.61 7.57 -51.93 -0.39 0.21 15 28 H 0.27 7.33 8.31 -40.82 -0.34 6.99 15 29 H 0.15 1.55 6.52 -52.48 -0.34 1.21 15 LS Contribution 271.32 15.07 4.09 4.09 Total: -1.00 -31.89 271.32 -6.28 -38.16 By element: Atomic # 1 Polarization: 2.07 SS G_CDS: -2.64 Total: -0.56 kcal Atomic # 6 Polarization: 3.13 SS G_CDS: -2.10 Total: 1.03 kcal Atomic # 7 Polarization: -46.56 SS G_CDS: 0.33 Total: -46.24 kcal Atomic # 8 Polarization: -11.77 SS G_CDS: 0.07 Total: -11.69 kcal Atomic # 14 Polarization: 21.11 SS G_CDS: -4.67 Total: 16.44 kcal Atomic # 17 Polarization: 0.12 SS G_CDS: -1.36 Total: -1.24 kcal Total LS contribution 4.09 Total: 4.09 kcal Total: -31.89 -6.28 -38.16 kcal The number of atoms in the molecule is 29 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000879800113.mol2 29 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.481 kcal (2) G-P(sol) polarization free energy of solvation -31.886 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.405 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.277 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.164 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds