Wall clock time and date at job start Sun Mar 29 2020 23:26:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35950 * 116.99802 * 2 1 4 4 C 1.38918 * 120.05663 * 269.72421 * 3 2 1 5 5 F 1.35099 * 120.04736 * 359.97438 * 4 3 2 6 6 C 1.38399 * 119.89362 * 179.76723 * 4 3 2 7 7 Cl 1.73601 * 119.99279 * 180.20715 * 6 4 3 8 8 C 1.38403 * 120.00736 * 0.48771 * 6 4 3 9 9 C 1.38206 * 120.11254 * 359.76576 * 8 6 4 10 10 C 1.38222 * 120.10544 * 359.97438 * 9 8 6 11 11 C 1.50705 * 120.00154 * 179.97438 * 10 9 8 12 12 C 1.52998 * 109.47236 * 264.97783 * 11 10 9 13 13 C 1.50705 * 109.47236 * 180.02562 * 12 11 10 14 14 H 1.08000 * 119.99520 * 0.02562 * 13 12 11 15 15 C 1.37867 * 119.99977 * 179.97438 * 13 12 11 16 16 N 1.31516 * 120.00377 * 0.02562 * 15 13 12 17 17 Si 1.86800 * 119.99866 * 180.02562 * 15 13 12 18 18 H 1.48504 * 109.46928 * 60.00508 * 17 15 13 19 19 H 1.48501 * 109.47003 * 180.02562 * 17 15 13 20 20 H 1.48497 * 109.47422 * 300.00282 * 17 15 13 21 21 H 1.09001 * 109.46558 * 60.00252 * 1 2 3 22 22 H 1.09001 * 109.47103 * 179.97438 * 1 2 3 23 23 H 1.09000 * 109.47187 * 300.00204 * 1 2 3 24 24 H 1.08003 * 119.93942 * 179.74958 * 8 6 4 25 25 H 1.08002 * 119.94859 * 179.97438 * 9 8 6 26 26 H 1.09005 * 109.47175 * 24.98634 * 11 10 9 27 27 H 1.08997 * 109.46761 * 144.97903 * 11 10 9 28 28 H 1.08997 * 109.47111 * 300.00454 * 12 11 10 29 29 H 1.09002 * 109.46694 * 60.00438 * 12 11 10 30 30 H 0.96993 * 120.00470 * 179.97438 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 2.3672 1.8287 -1.2024 5 9 2.0670 1.2259 -2.3736 6 6 2.9911 3.0641 -1.1985 7 17 3.3886 3.8403 -2.6995 8 6 3.3034 3.6780 0.0020 9 6 2.9889 3.0617 1.1984 10 6 2.3610 1.8303 1.1999 11 6 2.0196 1.1601 2.5059 12 6 3.1345 0.1831 2.8844 13 6 2.7928 -0.4876 4.1900 14 1 1.8724 -0.2418 4.6987 15 6 3.6548 -1.4156 4.7346 16 7 4.7754 -1.7154 4.1149 17 14 3.2309 -2.2474 6.3526 18 1 1.9515 -2.9874 6.2084 19 1 4.3131 -3.1957 6.7200 20 1 3.0916 -1.2201 7.4157 21 1 -0.3632 0.5138 -0.8900 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3633 0.5139 0.8900 24 1 3.7940 4.6402 0.0038 25 1 3.2342 3.5429 2.1336 26 1 1.9175 1.9148 3.2858 27 1 1.0805 0.6169 2.4008 28 1 3.2365 -0.5715 2.1045 29 1 4.0736 0.7264 2.9894 30 1 5.3820 -2.3680 4.4981 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000260856498.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:26:23 Heat of formation + Delta-G solvation = -78.402441 kcal Electronic energy + Delta-G solvation = -16819.986926 eV Core-core repulsion = 13748.662132 eV Total energy + Delta-G solvation = -3071.324794 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 258.056 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -48.81437 -39.83835 -37.46698 -36.36961 -34.01923 -32.02934 -30.09559 -28.95112 -26.83061 -25.10672 -22.55282 -22.32096 -20.43638 -17.89266 -17.10370 -16.91248 -16.28565 -15.96091 -15.17070 -14.76672 -14.49408 -14.46740 -13.80374 -13.29246 -12.93569 -12.72351 -12.42999 -12.32509 -11.91764 -11.50084 -11.47108 -11.01842 -10.94045 -10.76765 -10.61748 -10.06482 -9.77082 -9.63547 -9.15190 -8.60945 -8.35716 -8.31252 -6.00609 -4.04271 1.04356 1.06934 1.98821 3.32288 3.34925 3.37365 3.39477 3.83977 4.21093 4.44462 4.83542 4.96556 5.21091 5.35076 5.35944 5.42189 5.51128 5.72969 5.89448 5.90479 5.99082 6.23608 6.45128 6.57862 6.67936 6.93931 7.58377 7.64184 7.78926 7.98245 8.36725 9.01860 9.59588 11.10434 Molecular weight = 258.06amu Principal moments of inertia in cm(-1) A = 0.032260 B = 0.005103 C = 0.004769 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 867.750510 B = 5485.906092 C = 5870.123987 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.312 6.312 3 C 0.073 3.927 4 C 0.090 3.910 5 F -0.125 7.125 6 C -0.080 4.080 7 Cl -0.060 7.060 8 C -0.087 4.087 9 C -0.108 4.108 10 C -0.042 4.042 11 C -0.077 4.077 12 C 0.032 3.968 13 C -0.523 4.523 14 H 0.055 0.945 15 C 0.059 3.941 16 N -0.893 5.893 17 Si 0.893 3.107 18 H -0.277 1.277 19 H -0.287 1.287 20 H -0.277 1.277 21 H 0.042 0.958 22 H 0.098 0.902 23 H 0.051 0.949 24 H 0.142 0.858 25 H 0.144 0.856 26 H 0.066 0.934 27 H 0.066 0.934 28 H 0.025 0.975 29 H 0.017 0.983 30 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.189 10.444 -9.673 15.522 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.228 6.228 3 C 0.028 3.972 4 C 0.069 3.931 5 F -0.104 7.104 6 C -0.108 4.108 7 Cl -0.031 7.031 8 C -0.105 4.105 9 C -0.126 4.126 10 C -0.043 4.043 11 C -0.114 4.114 12 C -0.005 4.005 13 C -0.561 4.561 14 H 0.073 0.927 15 C -0.143 4.143 16 N -0.531 5.531 17 Si 0.720 3.280 18 H -0.202 1.202 19 H -0.213 1.213 20 H -0.202 1.202 21 H 0.060 0.940 22 H 0.116 0.884 23 H 0.070 0.930 24 H 0.160 0.840 25 H 0.162 0.838 26 H 0.084 0.916 27 H 0.084 0.916 28 H 0.043 0.957 29 H 0.035 0.965 30 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -5.930 10.185 -9.847 15.358 hybrid contribution -0.225 -0.431 0.431 0.650 sum -6.155 9.754 -9.416 14.889 Atomic orbital electron populations 1.23042 0.78931 1.03665 1.00377 1.86193 1.19813 1.22915 1.93909 1.18378 1.00825 0.87976 0.90035 1.17792 1.02369 0.91284 0.81671 1.91497 1.91097 1.82755 1.45006 1.20712 1.06915 0.94302 0.88861 1.98358 1.92753 1.80141 1.31881 1.20950 0.99340 1.00494 0.89740 1.21069 0.98689 0.94791 0.98071 1.20800 0.94429 0.92976 0.96066 1.20869 1.01890 0.98992 0.89639 1.19066 0.91825 0.92963 0.96613 1.21142 1.05649 1.23088 1.06246 0.92672 1.25002 0.95039 0.96732 0.97484 1.69957 1.10653 1.33497 1.39027 0.86657 0.77996 0.79375 0.83947 1.20230 1.21276 1.20246 0.93976 0.88405 0.93006 0.84034 0.83812 0.91553 0.91577 0.95681 0.96454 0.92867 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.47 10.80 101.05 1.09 1.56 16 2 O -0.31 -5.75 9.55 -19.58 -0.19 -5.94 16 3 C 0.07 1.30 5.70 -39.18 -0.22 1.07 16 4 C 0.09 1.48 7.28 -39.27 -0.29 1.19 16 5 F -0.13 -2.10 16.68 2.25 0.04 -2.06 16 6 C -0.08 -1.17 6.32 -39.46 -0.25 -1.42 16 7 Cl -0.06 -0.78 28.61 -51.86 -1.48 -2.26 16 8 C -0.09 -1.13 9.83 -39.53 -0.39 -1.52 16 9 C -0.11 -1.56 9.67 -39.60 -0.38 -1.94 16 10 C -0.04 -0.73 5.15 -104.48 -0.54 -1.27 16 11 C -0.08 -1.51 5.00 -27.88 -0.14 -1.65 16 12 C 0.03 0.82 4.96 -27.88 -0.14 0.68 16 13 C -0.52 -14.46 9.11 -34.44 -0.31 -14.77 16 14 H 0.06 1.46 7.74 -52.49 -0.41 1.05 16 15 C 0.06 1.67 5.46 -17.82 -0.10 1.58 16 16 N -0.89 -26.76 13.29 55.43 0.74 -26.02 16 17 Si 0.89 21.34 29.54 -169.99 -5.02 16.32 16 18 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 19 H -0.29 -6.83 7.11 56.52 0.40 -6.43 16 20 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 21 H 0.04 0.51 8.14 -51.93 -0.42 0.09 16 22 H 0.10 1.17 8.14 -51.93 -0.42 0.74 16 23 H 0.05 0.67 7.17 -51.93 -0.37 0.30 16 24 H 0.14 1.42 8.06 -52.48 -0.42 1.00 16 25 H 0.14 1.79 8.06 -52.49 -0.42 1.36 16 26 H 0.07 1.20 8.05 -51.93 -0.42 0.78 16 27 H 0.07 1.28 6.42 -51.93 -0.33 0.94 16 28 H 0.02 0.70 8.14 -51.93 -0.42 0.28 16 29 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 30 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 LS Contribution 284.65 15.07 4.29 4.29 Total: -1.00 -30.57 284.65 -6.50 -37.07 By element: Atomic # 1 Polarization: -1.71 SS G_CDS: -3.20 Total: -4.92 kcal Atomic # 6 Polarization: -14.81 SS G_CDS: -1.67 Total: -16.47 kcal Atomic # 7 Polarization: -26.76 SS G_CDS: 0.74 Total: -26.02 kcal Atomic # 8 Polarization: -5.75 SS G_CDS: -0.19 Total: -5.94 kcal Atomic # 9 Polarization: -2.10 SS G_CDS: 0.04 Total: -2.06 kcal Atomic # 14 Polarization: 21.34 SS G_CDS: -5.02 Total: 16.32 kcal Atomic # 17 Polarization: -0.78 SS G_CDS: -1.48 Total: -2.26 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -30.57 -6.50 -37.07 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000260856498.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.332 kcal (2) G-P(sol) polarization free energy of solvation -30.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.907 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.496 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.070 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds