Wall clock time and date at job start Mon Mar 30 2020 00:31:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.38514 * 120.82503 * 2 1 4 4 Cl 1.73599 * 120.25636 * 359.95830 * 3 2 1 5 5 C 1.38392 * 119.48288 * 179.97438 * 3 2 1 6 6 N 1.31912 * 121.20347 * 0.02562 * 5 3 2 7 7 C 1.32340 * 121.79702 * 359.97360 * 6 5 3 8 8 N 1.38465 * 119.81088 * 180.02562 * 7 6 5 9 9 C 1.46906 * 110.99708 * 64.56123 * 8 7 6 10 10 C 1.46892 * 110.99863 * 300.60666 * 8 7 6 11 11 C 1.50698 * 109.47155 * 190.00109 * 10 8 7 12 12 H 1.08002 * 120.00116 * 0.02562 * 11 10 8 13 13 C 1.37876 * 120.00304 * 179.97438 * 11 10 8 14 14 N 1.31515 * 119.99787 * 0.02562 * 13 11 10 15 15 Si 1.86797 * 120.00407 * 179.97438 * 13 11 10 16 16 H 1.48500 * 109.47066 * 59.99874 * 15 13 11 17 17 H 1.48496 * 109.47511 * 180.02562 * 15 13 11 18 18 H 1.48506 * 109.47005 * 300.00434 * 15 13 11 19 19 C 1.39931 * 120.82701 * 180.25425 * 2 1 3 20 20 C 1.43200 * 120.60489 * 0.03534 * 19 2 1 21 21 N 3.49450 * 81.59148 * 180.27832 * 2 1 3 22 22 H 1.08998 * 109.47243 * 90.00376 * 1 2 3 23 23 H 1.09005 * 109.46661 * 209.99915 * 1 2 3 24 24 H 1.08996 * 109.47145 * 329.99947 * 1 2 3 25 25 H 1.08004 * 119.39308 * 180.02562 * 5 3 2 26 26 H 1.08991 * 109.47452 * 54.23600 * 9 8 7 27 27 H 1.09000 * 109.46662 * 174.23431 * 9 8 7 28 28 H 1.08994 * 109.47050 * 294.22657 * 9 8 7 29 29 H 1.09001 * 109.47659 * 310.00350 * 10 8 7 30 30 H 1.08999 * 109.47775 * 70.00209 * 10 8 7 31 31 H 0.97001 * 119.99995 * 180.02562 * 14 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2167 1.1895 0.0000 4 17 1.3773 2.7090 -0.0011 5 6 3.6003 1.1571 0.0005 6 7 4.2571 0.0131 0.0005 7 6 3.6288 -1.1517 0.0006 8 7 4.3594 -2.3279 0.0011 9 6 5.1371 -2.4639 1.2400 10 6 5.2307 -2.4069 -1.1788 11 6 5.8206 -3.7902 -1.2760 12 1 5.5727 -4.5363 -0.5355 13 6 6.6760 -4.1038 -2.3109 14 7 6.9776 -3.1955 -3.2129 15 14 7.4078 -5.8183 -2.4310 16 1 6.3145 -6.8156 -2.5546 17 1 8.2885 -5.8982 -3.6239 18 1 8.2025 -6.1040 -1.2094 19 6 2.2240 -1.2016 -0.0053 20 6 1.5392 -2.4592 -0.0117 21 7 0.9959 -3.4569 -0.0168 22 1 -0.3633 -0.0001 -1.0276 23 1 -0.3633 -0.8901 0.5139 24 1 -0.3633 0.8899 0.5138 25 1 4.1522 2.0854 0.0010 26 1 4.4724 -2.3697 2.0985 27 1 5.6204 -3.4407 1.2601 28 1 5.8958 -1.6824 1.2803 29 1 4.6480 -2.1966 -2.0757 30 1 6.0335 -1.6752 -1.0875 31 1 7.5791 -3.4162 -3.9412 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273049219.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:31:28 Heat of formation + Delta-G solvation = 66.725296 kcal Electronic energy + Delta-G solvation = -17239.883699 eV Core-core repulsion = 14354.720650 eV Total energy + Delta-G solvation = -2885.163048 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.068 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.69399 -37.24350 -36.42512 -36.10437 -33.77454 -32.66393 -30.42916 -28.22408 -27.38304 -25.57862 -24.06354 -22.65517 -20.37389 -18.95597 -17.38434 -16.70333 -16.01987 -15.35199 -15.11748 -14.57319 -13.97393 -13.73183 -13.41034 -13.06926 -12.98751 -12.85847 -12.79109 -12.39550 -12.23365 -12.00182 -11.88042 -11.43687 -11.27481 -11.06339 -10.83564 -10.63468 -10.11349 -9.77713 -9.54145 -9.35022 -8.70735 -8.53930 -7.85745 -6.10004 -4.12813 0.55566 0.90602 1.85082 2.99649 3.08846 3.31173 3.35169 3.38257 3.84257 3.97215 4.03853 4.37060 4.42228 4.48813 5.00215 5.12537 5.19650 5.26555 5.33825 5.61088 5.68303 5.82843 5.89996 6.16176 6.21147 6.56061 7.05096 7.19457 7.63486 7.72276 7.74045 7.89473 7.99174 8.34205 8.92253 9.51251 11.00739 Molecular weight = 265.07amu Principal moments of inertia in cm(-1) A = 0.027495 B = 0.005232 C = 0.004791 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1018.116800 B = 5349.915448 C = 5842.432074 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 C 0.016 3.984 3 C -0.116 4.116 4 Cl -0.053 7.053 5 C 0.160 3.840 6 N -0.494 5.494 7 C 0.378 3.622 8 N -0.503 5.503 9 C 0.045 3.955 10 C 0.202 3.798 11 C -0.515 4.515 12 H 0.065 0.935 13 C 0.060 3.940 14 N -0.895 5.895 15 Si 0.901 3.099 16 H -0.276 1.276 17 H -0.287 1.287 18 H -0.276 1.276 19 C -0.058 4.058 20 C 0.280 3.720 21 N -0.408 5.408 22 H 0.090 0.910 23 H 0.076 0.924 24 H 0.085 0.915 25 H 0.168 0.832 26 H 0.046 0.954 27 H 0.086 0.914 28 H 0.037 0.963 29 H 0.029 0.971 30 H 0.016 0.984 31 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.119 11.746 7.518 17.230 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C 0.005 3.995 3 C -0.145 4.145 4 Cl -0.025 7.025 5 C -0.001 4.001 6 N -0.206 5.206 7 C 0.147 3.853 8 N -0.227 5.227 9 C -0.102 4.102 10 C 0.079 3.921 11 C -0.553 4.553 12 H 0.083 0.917 13 C -0.143 4.143 14 N -0.533 5.533 15 Si 0.729 3.271 16 H -0.201 1.201 17 H -0.212 1.212 18 H -0.201 1.201 19 C -0.065 4.065 20 C -0.036 4.036 21 N -0.084 5.084 22 H 0.108 0.892 23 H 0.095 0.905 24 H 0.104 0.896 25 H 0.185 0.815 26 H 0.065 0.935 27 H 0.105 0.895 28 H 0.056 0.944 29 H 0.047 0.953 30 H 0.034 0.966 31 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges -10.308 9.928 7.312 16.071 hybrid contribution 0.398 0.300 -0.285 0.574 sum -9.910 10.228 7.027 15.881 Atomic orbital electron populations 1.20985 0.88822 1.04265 1.04128 1.20089 0.97224 0.89701 0.92523 1.21639 0.93720 0.87321 1.11837 1.98356 1.77967 1.29046 1.97097 1.22873 0.89119 0.97177 0.90941 1.68355 1.39965 0.98135 1.14117 1.20499 0.89494 0.89070 0.86188 1.60427 1.30766 1.24650 1.06851 1.22225 0.95917 1.03203 0.88822 1.19856 0.89718 0.98129 0.84352 1.21028 1.26813 0.96468 1.11029 0.91671 1.24955 0.96347 0.97549 0.95407 1.69950 1.35715 1.33759 1.13905 0.86510 0.79015 0.84127 0.77498 1.20106 1.21235 1.20100 1.16571 0.91811 0.87238 1.10917 1.24679 0.92645 0.92213 0.94088 1.81155 1.09867 1.09340 1.07993 0.89191 0.90477 0.89618 0.81488 0.93486 0.89520 0.94409 0.95294 0.96580 0.92663 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.22 9.29 36.00 0.33 -0.88 16 2 C 0.02 0.20 5.95 -103.89 -0.62 -0.42 16 3 C -0.12 -1.37 6.33 -39.42 -0.25 -1.62 16 4 Cl -0.05 -0.51 27.44 -51.86 -1.42 -1.93 16 5 C 0.16 2.10 10.96 -17.46 -0.19 1.91 16 6 N -0.49 -8.49 9.77 -12.14 -0.12 -8.61 16 7 C 0.38 7.00 5.27 -155.05 -0.82 6.18 16 8 N -0.50 -10.77 4.10 -182.16 -0.75 -11.51 16 9 C 0.04 0.85 9.17 60.07 0.55 1.40 16 10 C 0.20 5.19 4.45 -4.98 -0.02 5.17 16 11 C -0.51 -14.22 8.54 -34.44 -0.29 -14.51 16 12 H 0.07 1.77 7.10 -52.49 -0.37 1.40 16 13 C 0.06 1.67 5.46 -17.82 -0.10 1.57 16 14 N -0.89 -26.24 13.29 55.43 0.74 -25.50 16 15 Si 0.90 21.49 29.54 -169.99 -5.02 16.47 16 16 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 17 H -0.29 -6.76 7.11 56.52 0.40 -6.36 16 18 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 19 C -0.06 -0.93 5.77 -106.46 -0.61 -1.54 16 20 C 0.28 4.91 13.45 -22.47 -0.30 4.61 16 21 N -0.41 -7.74 18.54 41.84 0.78 -6.97 16 22 H 0.09 0.80 8.14 -51.93 -0.42 0.37 16 23 H 0.08 0.76 7.20 -51.93 -0.37 0.38 16 24 H 0.09 0.68 7.01 -51.93 -0.36 0.32 16 25 H 0.17 1.69 8.06 -52.48 -0.42 1.27 16 26 H 0.05 0.76 8.10 -51.93 -0.42 0.34 16 27 H 0.09 1.70 6.91 -51.93 -0.36 1.34 16 28 H 0.04 0.71 8.05 -51.93 -0.42 0.29 16 29 H 0.03 0.81 8.05 -51.93 -0.42 0.39 16 30 H 0.02 0.45 8.06 -51.93 -0.42 0.03 16 31 H 0.26 7.33 8.31 -40.82 -0.34 6.99 16 LS Contribution 293.62 15.07 4.42 4.42 Total: -1.00 -30.36 293.62 -6.82 -37.17 By element: Atomic # 1 Polarization: -2.27 SS G_CDS: -3.12 Total: -5.40 kcal Atomic # 6 Polarization: 4.18 SS G_CDS: -2.32 Total: 1.86 kcal Atomic # 7 Polarization: -53.24 SS G_CDS: 0.65 Total: -52.60 kcal Atomic # 14 Polarization: 21.49 SS G_CDS: -5.02 Total: 16.47 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -1.42 Total: -1.93 kcal Total LS contribution 4.42 Total: 4.42 kcal Total: -30.36 -6.82 -37.17 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273049219.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 103.900 kcal (2) G-P(sol) polarization free energy of solvation -30.356 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.544 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.818 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.175 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.725 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds