Wall clock time and date at job start Mon Mar 30 2020 00:31:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.38510 * 120.82620 * 2 1 4 4 Cl 1.73604 * 120.25958 * 0.04774 * 3 2 1 5 5 C 1.38388 * 119.48567 * 180.02562 * 3 2 1 6 6 N 1.31925 * 121.19747 * 359.73256 * 5 3 2 7 7 C 1.32337 * 121.79668 * 0.56064 * 6 5 3 8 8 N 1.38465 * 119.81052 * 179.71315 * 7 6 5 9 9 C 1.46498 * 120.00207 * 359.45611 * 8 7 6 10 10 H 1.08999 * 109.47316 * 34.99462 * 9 8 7 11 11 C 1.52999 * 109.46890 * 275.00112 * 9 8 7 12 12 C 1.50694 * 109.47285 * 154.99696 * 9 8 7 13 13 H 1.07995 * 120.00084 * 0.02562 * 12 9 8 14 14 C 1.37885 * 119.99899 * 179.97438 * 12 9 8 15 15 N 1.31511 * 119.99871 * 0.02562 * 14 12 9 16 16 Si 1.86797 * 119.99802 * 180.02562 * 14 12 9 17 17 H 1.48497 * 109.47417 * 0.02562 * 16 14 12 18 18 H 1.48503 * 109.47128 * 120.00139 * 16 14 12 19 19 H 1.48494 * 109.47127 * 240.00136 * 16 14 12 20 20 C 1.39933 * 120.82113 * 180.02562 * 2 1 3 21 21 C 1.43193 * 120.60585 * 359.97438 * 20 2 1 22 22 N 3.49449 * 81.58717 * 180.02562 * 2 1 3 23 23 H 1.09000 * 109.47082 * 269.97504 * 1 2 3 24 24 H 1.09008 * 109.46827 * 29.97594 * 1 2 3 25 25 H 1.08997 * 109.47055 * 149.97144 * 1 2 3 26 26 H 1.07994 * 119.40287 * 180.02562 * 5 3 2 27 27 H 0.97005 * 119.99845 * 179.72911 * 8 7 6 28 28 H 1.09005 * 109.47033 * 299.99923 * 11 9 8 29 29 H 1.08999 * 109.47825 * 59.99767 * 11 9 8 30 30 H 1.09003 * 109.47127 * 179.97438 * 11 9 8 31 31 H 0.97002 * 119.99765 * 180.02562 * 15 14 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2168 1.1894 0.0000 4 17 1.3774 2.7091 0.0012 5 6 3.6003 1.1570 -0.0005 6 7 4.2571 0.0129 0.0042 7 6 3.6288 -1.1518 -0.0013 8 7 4.3593 -2.3280 -0.0020 9 6 5.8236 -2.2809 -0.0087 10 1 6.1623 -1.4265 0.5773 11 6 6.3227 -2.1420 -1.4482 12 6 6.3697 -3.5504 0.5922 13 1 5.6939 -4.3159 0.9435 14 6 7.7325 -3.7350 0.6925 15 7 8.5555 -2.8029 0.2642 16 14 8.4095 -5.3089 1.4366 17 1 7.2842 -6.1909 1.8377 18 1 9.2525 -6.0080 0.4337 19 1 9.2301 -4.9793 2.6295 20 6 2.2240 -1.2017 -0.0005 21 6 1.5391 -2.4592 -0.0005 22 7 0.9958 -3.4569 -0.0015 23 1 -0.3633 -0.0004 1.0277 24 1 -0.3633 0.8903 -0.5135 25 1 -0.3633 -0.8897 -0.5143 26 1 4.1524 2.0852 -0.0001 27 1 3.9016 -3.1833 -0.0021 28 1 5.9840 -2.9964 -2.0343 29 1 5.9277 -1.2238 -1.8829 30 1 7.4122 -2.1065 -1.4532 31 1 9.5143 -2.9329 0.3344 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000273426927.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:31:34 Heat of formation + Delta-G solvation = 50.365184 kcal Electronic energy + Delta-G solvation = -17117.624329 eV Core-core repulsion = 14231.751853 eV Total energy + Delta-G solvation = -2885.872476 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.068 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -40.35800 -36.83726 -36.40570 -35.83622 -33.68066 -32.94482 -30.49765 -28.13054 -27.85733 -25.36546 -24.13196 -22.12571 -20.27265 -18.78799 -17.83122 -16.70221 -16.06157 -15.18127 -14.98866 -14.87789 -13.85670 -13.67660 -13.29300 -13.08748 -12.97313 -12.82584 -12.69471 -12.33619 -12.28217 -11.94849 -11.73271 -11.16441 -11.10204 -11.04630 -10.82026 -10.42264 -10.30755 -9.59289 -9.40097 -9.30965 -9.09149 -8.57633 -7.26795 -6.22724 -4.32085 0.83069 1.40848 2.19068 2.85320 3.15417 3.18900 3.27291 3.30454 3.69102 4.03208 4.06381 4.28291 4.55183 4.65114 5.09556 5.11415 5.32444 5.34803 5.42944 5.71672 5.84095 6.03484 6.33634 6.68939 6.88449 6.98560 7.22914 7.51804 7.54768 7.64676 7.77143 8.02084 8.12106 8.47590 8.76010 9.35042 10.83048 Molecular weight = 265.07amu Principal moments of inertia in cm(-1) A = 0.027650 B = 0.005084 C = 0.004482 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1012.411475 B = 5505.782425 C = 6246.057570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.126 4.126 2 C 0.064 3.936 3 C -0.184 4.184 4 Cl -0.069 7.069 5 C 0.212 3.788 6 N -0.518 5.518 7 C 0.463 3.537 8 N -0.672 5.672 9 C 0.264 3.736 10 H 0.062 0.938 11 C -0.147 4.147 12 C -0.540 4.540 13 H 0.061 0.939 14 C 0.070 3.930 15 N -0.881 5.881 16 Si 0.902 3.098 17 H -0.273 1.273 18 H -0.282 1.282 19 H -0.281 1.281 20 C -0.178 4.178 21 C 0.272 3.728 22 N -0.432 5.432 23 H 0.086 0.914 24 H 0.084 0.916 25 H 0.071 0.929 26 H 0.167 0.833 27 H 0.401 0.599 28 H 0.025 0.975 29 H 0.018 0.982 30 H 0.093 0.907 31 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.494 9.438 -1.108 14.914 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C 0.053 3.947 3 C -0.217 4.217 4 Cl -0.041 7.041 5 C 0.046 3.954 6 N -0.235 5.235 7 C 0.219 3.781 8 N -0.291 5.291 9 C 0.163 3.837 10 H 0.080 0.920 11 C -0.206 4.206 12 C -0.578 4.578 13 H 0.079 0.921 14 C -0.134 4.134 15 N -0.518 5.518 16 Si 0.729 3.271 17 H -0.197 1.197 18 H -0.208 1.208 19 H -0.207 1.207 20 C -0.191 4.191 21 C -0.042 4.042 22 N -0.109 5.109 23 H 0.105 0.895 24 H 0.103 0.897 25 H 0.090 0.910 26 H 0.184 0.816 27 H 0.237 0.763 28 H 0.044 0.956 29 H 0.037 0.963 30 H 0.112 0.888 31 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -10.982 7.912 -1.117 13.582 hybrid contribution -0.425 -0.644 0.358 0.851 sum -11.407 7.268 -0.759 13.547 Atomic orbital electron populations 1.20970 0.89627 1.03939 1.03699 1.19751 0.96309 0.89537 0.89058 1.21163 0.93356 0.86635 1.20516 1.98318 1.78222 1.29907 1.97675 1.22714 0.89051 0.96276 0.87336 1.67711 1.37744 0.96281 1.21782 1.18529 0.85633 0.88204 0.85761 1.45886 1.09870 1.03230 1.70139 1.19010 0.71375 0.98807 0.94472 0.92043 1.22105 1.04582 0.96924 0.96953 1.21222 0.92122 1.02713 1.41734 0.92116 1.24834 0.96588 0.96962 0.94969 1.69890 1.03271 1.33100 1.45530 0.86383 0.79035 0.82757 0.78927 1.19743 1.20755 1.20712 1.15995 0.91159 0.87215 1.24770 1.25168 0.93539 0.92506 0.93035 1.81236 1.08208 1.10351 1.11119 0.89529 0.89714 0.90963 0.81599 0.76310 0.95573 0.96264 0.88805 0.92480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.28 9.30 36.01 0.33 -0.95 16 2 C 0.06 0.83 5.95 -103.89 -0.62 0.21 16 3 C -0.18 -2.29 6.33 -39.43 -0.25 -2.54 16 4 Cl -0.07 -0.72 27.44 -51.86 -1.42 -2.15 16 5 C 0.21 2.89 10.96 -17.46 -0.19 2.70 16 6 N -0.52 -9.06 9.17 -12.14 -0.11 -9.17 16 7 C 0.46 8.31 7.47 -155.05 -1.16 7.15 16 8 N -0.67 -13.58 5.13 -54.83 -0.28 -13.87 16 9 C 0.26 6.26 2.57 -69.09 -0.18 6.09 16 10 H 0.06 1.60 7.52 -51.93 -0.39 1.21 16 11 C -0.15 -3.41 9.27 37.16 0.34 -3.06 16 12 C -0.54 -13.93 8.73 -34.44 -0.30 -14.23 16 13 H 0.06 1.56 7.74 -52.49 -0.41 1.15 16 14 C 0.07 1.83 5.30 -17.82 -0.09 1.74 16 15 N -0.88 -23.68 11.32 55.43 0.63 -23.05 16 16 Si 0.90 20.36 29.54 -169.99 -5.02 15.34 16 17 H -0.27 -6.15 7.11 56.52 0.40 -5.74 16 18 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 19 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 20 C -0.18 -2.75 5.77 -106.46 -0.61 -3.37 16 21 C 0.27 4.38 12.72 -22.48 -0.29 4.09 16 22 N -0.43 -7.48 18.54 41.84 0.78 -6.70 16 23 H 0.09 0.79 8.14 -51.93 -0.42 0.37 16 24 H 0.08 0.75 7.01 -51.92 -0.36 0.39 16 25 H 0.07 0.75 7.19 -51.93 -0.37 0.38 16 26 H 0.17 1.80 8.06 -52.49 -0.42 1.37 16 27 H 0.40 7.88 7.38 -40.82 -0.30 7.58 16 28 H 0.03 0.58 8.14 -51.93 -0.42 0.16 16 29 H 0.02 0.40 8.14 -51.93 -0.42 -0.02 16 30 H 0.09 2.38 6.07 -51.93 -0.32 2.06 16 31 H 0.27 6.77 8.31 -40.82 -0.34 6.43 16 LS Contribution 290.54 15.07 4.38 4.38 Total: -1.00 -26.87 290.54 -7.04 -33.91 By element: Atomic # 1 Polarization: 6.47 SS G_CDS: -2.98 Total: 3.49 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -3.01 Total: -2.18 kcal Atomic # 7 Polarization: -53.80 SS G_CDS: 1.01 Total: -52.79 kcal Atomic # 14 Polarization: 20.36 SS G_CDS: -5.02 Total: 15.34 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.42 Total: -2.15 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -26.87 -7.04 -33.91 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000273426927.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.275 kcal (2) G-P(sol) polarization free energy of solvation -26.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.408 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.043 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.910 kcal (6) G-S(sol) free energy of system = (1) + (5) 50.365 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds