Wall clock time and date at job start Mon Mar 30 2020 00:20:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.36711 * 120.00161 * 2 1 4 4 H 1.07997 * 120.00061 * 205.62289 * 3 2 1 5 5 C 1.39123 * 119.99702 * 25.62378 * 3 2 1 6 6 N 1.31325 * 120.00144 * 11.36021 * 5 3 2 7 7 Si 1.86800 * 119.99907 * 191.35501 * 5 3 2 8 8 H 1.48496 * 109.47356 * 60.00034 * 7 5 3 9 9 H 1.48500 * 109.47156 * 180.02562 * 7 5 3 10 10 H 1.48501 * 109.47337 * 299.99769 * 7 5 3 11 11 C 1.34775 * 119.99842 * 180.02562 * 2 1 3 12 12 O 1.21763 * 119.99875 * 179.97438 * 11 2 1 13 13 C 1.46229 * 120.00439 * 359.97438 * 11 2 1 14 14 C 1.34970 * 120.00396 * 179.97438 * 13 11 2 15 15 C 1.47150 * 120.00215 * 179.97438 * 14 13 11 16 16 C 1.39898 * 120.16609 * 0.02562 * 15 14 13 17 17 C 1.37859 * 119.85273 * 179.97438 * 16 15 14 18 18 C 1.38419 * 120.18656 * 359.97438 * 17 16 15 19 19 C 1.38502 * 120.33596 * 359.72877 * 18 17 16 20 20 Cl 1.73602 * 119.92666 * 180.30125 * 19 18 17 21 21 C 1.38021 * 120.15179 * 0.55232 * 19 18 17 22 22 H 1.09000 * 109.46498 * 264.92498 * 1 2 3 23 23 H 1.08997 * 109.47203 * 24.91996 * 1 2 3 24 24 H 1.08994 * 109.47255 * 144.92737 * 1 2 3 25 25 H 0.96995 * 119.99778 * 180.02562 * 6 5 3 26 26 H 1.08007 * 119.99611 * 0.02562 * 13 11 2 27 27 H 1.08006 * 119.99931 * 0.02562 * 14 13 11 28 28 H 1.08001 * 120.07297 * 359.97438 * 16 15 14 29 29 H 1.07995 * 119.90863 * 180.02562 * 17 16 15 30 30 H 1.07997 * 119.83192 * 180.02562 * 18 17 16 31 31 H 1.07999 * 120.10070 * 179.72424 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1486 1.1839 0.0000 4 1 3.1489 1.2299 -0.4045 5 6 1.5556 2.3295 0.5211 6 7 0.4414 2.2368 1.2101 7 14 2.3442 3.9995 0.2407 8 1 2.4266 4.2696 -1.2171 9 1 1.5232 5.0505 0.8938 10 1 3.7101 4.0060 0.8233 11 6 2.1388 -1.1672 -0.0005 12 8 3.3565 -1.1672 -0.0010 13 6 1.4078 -2.4336 -0.0005 14 6 2.0826 -3.6025 -0.0016 15 6 1.3469 -4.8769 -0.0010 16 6 -0.0521 -4.8810 0.0001 17 6 -0.7348 -6.0786 0.0001 18 6 -0.0401 -7.2758 -0.0015 19 6 1.3449 -7.2809 -0.0088 20 17 2.2055 -8.7885 -0.0187 21 6 2.0426 -6.0900 -0.0030 22 1 -0.3632 -0.0909 1.0237 23 1 -0.3633 0.9320 -0.4330 24 1 -0.3633 -0.8410 -0.5905 25 1 0.0278 3.0356 1.5730 26 1 0.3277 -2.4336 -0.0005 27 1 3.1627 -3.6025 -0.0020 28 1 -0.5960 -3.9479 0.0009 29 1 -1.8148 -6.0828 0.0005 30 1 -0.5807 -8.2107 -0.0019 31 1 3.1225 -6.0949 -0.0042 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491364824.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:20:39 Heat of formation + Delta-G solvation = 5.634990 kcal Electronic energy + Delta-G solvation = -16570.055654 eV Core-core repulsion = 13649.950780 eV Total energy + Delta-G solvation = -2920.104874 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -39.37533 -38.39262 -36.59542 -34.87643 -33.50106 -31.75596 -30.94531 -29.34036 -26.49215 -25.04194 -23.46675 -22.66869 -20.74489 -18.19932 -17.38555 -16.93148 -16.16896 -15.44201 -15.28037 -14.74548 -14.11529 -13.94806 -13.80770 -13.60156 -13.30601 -12.78896 -12.04476 -11.88392 -11.72084 -11.62204 -11.45242 -11.35841 -11.12950 -10.92091 -10.78781 -10.46762 -10.40321 -9.98394 -9.11747 -8.89456 -8.48709 -8.05127 -7.74755 -6.47515 -3.95984 0.70688 1.15343 2.01473 2.30928 3.15726 3.18357 3.22289 3.70855 4.03961 4.37788 4.61957 4.73403 4.92101 5.02919 5.09894 5.17855 5.30372 5.47203 5.68357 5.78552 5.96759 6.13130 6.22008 6.25881 6.31107 6.72140 6.73710 6.86144 6.93314 7.09456 7.42480 8.05284 8.39201 9.08711 9.29351 9.92583 10.56225 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.050644 B = 0.003476 C = 0.003280 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 552.746056 B = 8053.265431 C = 8535.309436 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.106 3.894 2 N -0.427 5.427 3 C -0.301 4.301 4 H 0.101 0.899 5 C 0.031 3.969 6 N -0.872 5.872 7 Si 0.931 3.069 8 H -0.271 1.271 9 H -0.282 1.282 10 H -0.270 1.270 11 C 0.456 3.544 12 O -0.596 6.596 13 C -0.142 4.142 14 C -0.098 4.098 15 C -0.026 4.026 16 C -0.114 4.114 17 C -0.104 4.104 18 C -0.122 4.122 19 C -0.032 4.032 20 Cl -0.078 7.078 21 C -0.104 4.104 22 H 0.054 0.946 23 H 0.077 0.923 24 H 0.029 0.971 25 H 0.272 0.728 26 H 0.119 0.881 27 H 0.133 0.867 28 H 0.134 0.866 29 H 0.132 0.868 30 H 0.129 0.871 31 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.153 -14.962 -2.160 15.972 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.038 4.038 2 N -0.143 5.143 3 C -0.429 4.429 4 H 0.119 0.881 5 C -0.174 4.174 6 N -0.509 5.509 7 Si 0.757 3.243 8 H -0.197 1.197 9 H -0.208 1.208 10 H -0.195 1.195 11 C 0.248 3.752 12 O -0.484 6.484 13 C -0.163 4.163 14 C -0.120 4.120 15 C -0.026 4.026 16 C -0.132 4.132 17 C -0.122 4.122 18 C -0.141 4.141 19 C -0.058 4.058 20 Cl -0.049 7.049 21 C -0.123 4.123 22 H 0.073 0.927 23 H 0.095 0.905 24 H 0.048 0.952 25 H 0.082 0.918 26 H 0.137 0.863 27 H 0.151 0.849 28 H 0.151 0.849 29 H 0.150 0.850 30 H 0.147 0.853 31 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -4.657 -14.870 -2.058 15.717 hybrid contribution 0.117 0.717 0.043 0.728 sum -4.540 -14.153 -2.014 14.999 Atomic orbital electron populations 1.21586 0.81160 1.00283 1.00727 1.43540 1.05662 1.05019 1.60091 1.19710 1.01451 0.84429 1.37327 0.88104 1.25476 0.96522 1.00528 0.94872 1.69934 1.18840 1.30417 1.31744 0.85916 0.79224 0.80322 0.78839 1.19674 1.20771 1.19533 1.17949 0.87649 0.83798 0.85833 1.90644 1.13451 1.87147 1.57110 1.23402 0.99840 0.93718 0.99348 1.22010 1.00071 0.89543 1.00336 1.19090 0.92975 0.92831 0.97734 1.21582 0.93608 0.98740 0.99249 1.21020 1.00116 0.91529 0.99547 1.21060 0.91900 0.99112 1.02051 1.20794 0.92521 0.86779 1.05719 1.98360 1.77338 1.32186 1.97047 1.21240 1.00542 0.89950 1.00598 0.92730 0.90463 0.95229 0.91799 0.86316 0.84910 0.84861 0.85040 0.85260 0.84626 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.30 8.28 59.85 0.50 2.79 16 2 N -0.43 -10.95 3.00 -123.87 -0.37 -11.32 16 3 C -0.30 -8.31 9.21 -15.05 -0.14 -8.45 16 4 H 0.10 2.90 7.46 -52.49 -0.39 2.51 16 5 C 0.03 0.80 5.06 -17.44 -0.09 0.71 16 6 N -0.87 -22.61 10.83 55.50 0.60 -22.01 16 7 Si 0.93 20.21 29.57 -169.99 -5.03 15.18 16 8 H -0.27 -5.78 7.11 56.52 0.40 -5.38 16 9 H -0.28 -5.96 7.11 56.52 0.40 -5.56 16 10 H -0.27 -5.94 7.11 56.52 0.40 -5.53 16 11 C 0.46 11.36 7.55 -13.05 -0.10 11.26 16 12 O -0.60 -16.90 15.95 5.13 0.08 -16.82 16 13 C -0.14 -2.72 8.60 -37.53 -0.32 -3.04 16 14 C -0.10 -1.69 9.46 -37.13 -0.35 -2.04 16 15 C -0.03 -0.37 5.87 -105.06 -0.62 -0.98 16 16 C -0.11 -1.41 9.41 -39.10 -0.37 -1.78 16 17 C -0.10 -1.09 10.03 -39.65 -0.40 -1.48 16 18 C -0.12 -1.29 9.82 -39.42 -0.39 -1.68 16 19 C -0.03 -0.38 6.31 -39.56 -0.25 -0.63 16 20 Cl -0.08 -0.85 28.95 -51.86 -1.50 -2.35 16 21 C -0.10 -1.36 9.58 -39.06 -0.37 -1.74 16 22 H 0.05 1.20 7.85 -51.93 -0.41 0.79 16 23 H 0.08 1.75 6.79 -51.93 -0.35 1.40 16 24 H 0.03 0.52 6.39 -51.93 -0.33 0.19 16 25 H 0.27 6.64 8.31 -40.82 -0.34 6.31 16 26 H 0.12 1.93 4.33 -52.48 -0.23 1.70 16 27 H 0.13 2.42 7.52 -52.48 -0.39 2.02 16 28 H 0.13 1.53 6.17 -52.49 -0.32 1.20 16 29 H 0.13 1.01 8.06 -52.49 -0.42 0.59 16 30 H 0.13 1.09 8.06 -52.49 -0.42 0.67 16 31 H 0.14 1.64 8.06 -52.49 -0.42 1.22 16 LS Contribution 287.79 15.07 4.34 4.34 Total: -1.00 -30.30 287.79 -7.61 -37.91 By element: Atomic # 1 Polarization: 4.95 SS G_CDS: -2.83 Total: 2.12 kcal Atomic # 6 Polarization: -4.16 SS G_CDS: -2.90 Total: -7.06 kcal Atomic # 7 Polarization: -33.56 SS G_CDS: 0.23 Total: -33.33 kcal Atomic # 8 Polarization: -16.90 SS G_CDS: 0.08 Total: -16.82 kcal Atomic # 14 Polarization: 20.21 SS G_CDS: -5.03 Total: 15.18 kcal Atomic # 17 Polarization: -0.85 SS G_CDS: -1.50 Total: -2.35 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -30.30 -7.61 -37.91 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491364824.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.546 kcal (2) G-P(sol) polarization free energy of solvation -30.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.243 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.911 kcal (6) G-S(sol) free energy of system = (1) + (5) 5.635 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds