Wall clock time and date at job start Mon Mar 30 2020 00:20:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37101 * 120.00087 * 2 1 4 4 H 1.07997 * 119.99758 * 202.44568 * 3 2 1 5 5 C 1.38952 * 120.00200 * 22.43721 * 3 2 1 6 6 N 1.31407 * 119.99558 * 11.08863 * 5 3 2 7 7 Si 1.86799 * 120.00040 * 191.08403 * 5 3 2 8 8 H 1.48498 * 109.46944 * 0.02562 * 7 5 3 9 9 H 1.48498 * 109.47011 * 120.00359 * 7 5 3 10 10 H 1.48497 * 109.47198 * 240.00247 * 7 5 3 11 11 C 1.34773 * 119.99848 * 179.97438 * 2 1 3 12 12 O 1.21294 * 119.99972 * 180.02562 * 11 2 1 13 13 C 1.50697 * 120.00041 * 0.02562 * 11 2 1 14 14 H 1.09005 * 112.88553 * 308.32887 * 13 11 2 15 15 C 1.52262 * 113.59189 * 177.16381 * 13 11 2 16 16 C 1.50549 * 87.23572 * 245.41025 * 15 13 11 17 17 C 1.37749 * 92.76952 * 359.97438 * 16 15 13 18 18 C 1.38768 * 119.93790 * 179.97438 * 17 16 15 19 19 C 1.38125 * 120.12025 * 0.02562 * 18 17 16 20 20 C 1.38168 * 119.99218 * 359.97438 * 19 18 17 21 21 C 1.38228 * 119.97200 * 0.04372 * 20 19 18 22 22 Cl 1.73595 * 119.97075 * 179.97438 * 21 20 19 23 23 H 1.08999 * 109.47260 * 273.63490 * 1 2 3 24 24 H 1.09003 * 109.46910 * 33.63499 * 1 2 3 25 25 H 1.08995 * 109.47140 * 153.63245 * 1 2 3 26 26 H 0.97002 * 119.99779 * 179.97438 * 6 5 3 27 27 H 1.09000 * 113.59406 * 130.81695 * 15 13 11 28 28 H 1.09004 * 113.58285 * 359.97438 * 15 13 11 29 29 H 1.07995 * 119.94009 * 179.71872 * 18 17 16 30 30 H 1.07995 * 119.99871 * 180.02562 * 19 18 17 31 31 H 1.08000 * 120.01232 * 179.97438 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1505 1.1873 0.0000 4 1 3.1691 1.2227 -0.3571 5 6 1.5347 2.3452 0.4593 6 7 0.3853 2.2713 1.0919 7 14 2.3408 4.0065 0.1776 8 1 3.6194 3.8186 -0.5539 9 1 1.4342 4.8670 -0.6242 10 1 2.6094 4.6547 1.4863 11 6 2.1388 -1.1672 0.0005 12 8 3.3518 -1.1672 0.0010 13 6 1.3853 -2.4723 0.0005 14 1 0.6337 -2.5278 0.7880 15 6 2.2876 -3.6968 -0.0679 16 6 1.6831 -3.9765 -1.4181 17 6 0.8664 -2.8690 -1.3560 18 6 0.0073 -2.5822 -2.4074 19 6 -0.0307 -3.4056 -3.5157 20 6 0.7881 -4.5168 -3.5791 21 6 1.6442 -4.8042 -2.5326 22 17 2.6724 -6.2007 -2.6119 23 1 -0.3634 0.0652 1.0256 24 1 -0.3633 0.8557 -0.5692 25 1 -0.3633 -0.9207 -0.4564 26 1 -0.0444 3.0795 1.4128 27 1 2.0530 -4.4539 0.6804 28 1 3.3496 -3.4544 -0.1075 29 1 -0.6363 -1.7165 -2.3568 30 1 -0.6997 -3.1804 -4.3330 31 1 0.7583 -5.1610 -4.4454 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000528319542.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:20:59 Heat of formation + Delta-G solvation = 29.824880 kcal Electronic energy + Delta-G solvation = -17524.323603 eV Core-core repulsion = 14605.267681 eV Total energy + Delta-G solvation = -2919.055922 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.31 seconds Orbital eigenvalues (eV) -40.78523 -38.09191 -36.42291 -35.27903 -34.43647 -31.66442 -30.37527 -27.62760 -26.49709 -25.29307 -23.82551 -21.89047 -20.66090 -18.54816 -17.01070 -16.87290 -16.30186 -15.52179 -14.99992 -14.78403 -14.11157 -13.99735 -13.53054 -13.21086 -12.80610 -12.60061 -12.11428 -11.76252 -11.56257 -11.33699 -11.32738 -11.20500 -11.13418 -10.92836 -10.62196 -10.44259 -10.33535 -10.26282 -9.07938 -8.96493 -8.49942 -8.18801 -7.72612 -6.34991 -3.91829 1.27086 1.34703 2.26054 3.12104 3.23571 3.30675 3.62527 3.78034 4.10512 4.38214 4.58443 4.77534 4.96606 5.03335 5.13537 5.38404 5.57654 5.63315 5.72936 5.87001 5.91583 6.11479 6.20397 6.30873 6.45321 6.45636 6.74922 6.84061 6.95285 7.19667 7.53181 8.08442 8.43855 9.13920 9.37633 9.92548 10.68037 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.034554 B = 0.005104 C = 0.004853 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 810.138624 B = 5484.611832 C = 5768.559004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.109 3.891 2 N -0.438 5.438 3 C -0.305 4.305 4 H 0.100 0.900 5 C 0.031 3.969 6 N -0.882 5.882 7 Si 0.927 3.073 8 H -0.268 1.268 9 H -0.281 1.281 10 H -0.281 1.281 11 C 0.459 3.541 12 O -0.584 6.584 13 C -0.059 4.059 14 H 0.112 0.888 15 C -0.055 4.055 16 C -0.113 4.113 17 C -0.090 4.090 18 C -0.087 4.087 19 C -0.110 4.110 20 C -0.116 4.116 21 C -0.011 4.011 22 Cl -0.085 7.085 23 H 0.060 0.940 24 H 0.067 0.933 25 H 0.029 0.971 26 H 0.267 0.733 27 H 0.093 0.907 28 H 0.113 0.887 29 H 0.128 0.872 30 H 0.134 0.866 31 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.232 -11.260 -6.088 13.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.034 4.034 2 N -0.156 5.156 3 C -0.433 4.433 4 H 0.117 0.883 5 C -0.172 4.172 6 N -0.521 5.521 7 Si 0.753 3.247 8 H -0.192 1.192 9 H -0.206 1.206 10 H -0.207 1.207 11 C 0.247 3.753 12 O -0.468 6.468 13 C -0.080 4.080 14 H 0.130 0.870 15 C -0.092 4.092 16 C -0.114 4.114 17 C -0.091 4.091 18 C -0.105 4.105 19 C -0.128 4.128 20 C -0.134 4.134 21 C -0.037 4.037 22 Cl -0.056 7.056 23 H 0.079 0.921 24 H 0.086 0.914 25 H 0.048 0.952 26 H 0.077 0.923 27 H 0.111 0.889 28 H 0.131 0.869 29 H 0.146 0.854 30 H 0.152 0.848 31 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -3.700 -11.208 -6.023 13.250 hybrid contribution 0.072 0.803 -0.157 0.822 sum -3.627 -10.404 -6.180 12.633 Atomic orbital electron populations 1.21587 0.81066 0.98698 1.02084 1.43530 1.05595 1.04590 1.61850 1.19733 0.99549 0.83709 1.40272 0.88275 1.25351 0.96449 1.00102 0.95321 1.70004 1.17061 1.29247 1.35822 0.85848 0.79325 0.81299 0.78185 1.19192 1.20643 1.20664 1.19389 0.87639 0.83935 0.84382 1.90513 1.13649 1.86504 1.56180 1.21153 0.97545 0.95699 0.93608 0.87047 1.21435 1.02013 0.95051 0.90695 1.21793 0.98679 0.94856 0.96069 1.21640 0.95617 0.95551 0.96333 1.20680 0.98192 0.99526 0.92083 1.20889 0.99507 0.94421 0.98009 1.20826 0.96379 0.98696 0.97522 1.20396 0.96990 0.90725 0.95610 1.98342 1.67363 1.41434 1.98435 0.92131 0.91424 0.95204 0.92255 0.88881 0.86890 0.85383 0.84848 0.84934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.39 8.46 59.85 0.51 2.89 16 2 N -0.44 -11.10 3.02 -122.19 -0.37 -11.47 16 3 C -0.30 -8.44 9.29 -14.93 -0.14 -8.58 16 4 H 0.10 2.90 7.40 -52.49 -0.39 2.51 16 5 C 0.03 0.81 5.13 -17.47 -0.09 0.72 16 6 N -0.88 -23.10 10.58 55.50 0.59 -22.51 16 7 Si 0.93 20.58 29.57 -169.99 -5.03 15.56 16 8 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 9 H -0.28 -6.07 7.11 56.52 0.40 -5.67 16 10 H -0.28 -6.21 7.11 56.52 0.40 -5.80 16 11 C 0.46 11.12 7.15 -10.99 -0.08 11.05 16 12 O -0.58 -16.11 15.38 5.55 0.09 -16.03 16 13 C -0.06 -1.09 2.95 -93.66 -0.28 -1.36 16 14 H 0.11 1.84 7.94 -51.93 -0.41 1.43 16 15 C -0.06 -0.92 7.69 -28.62 -0.22 -1.14 16 16 C -0.11 -1.87 7.21 -104.93 -0.76 -2.63 16 17 C -0.09 -1.55 6.08 -104.96 -0.64 -2.19 16 18 C -0.09 -1.30 9.62 -39.43 -0.38 -1.68 16 19 C -0.11 -1.39 10.04 -39.65 -0.40 -1.79 16 20 C -0.12 -1.49 9.82 -39.61 -0.39 -1.88 16 21 C -0.01 -0.16 6.33 -39.35 -0.25 -0.41 16 22 Cl -0.08 -1.14 28.96 -51.86 -1.50 -2.64 16 23 H 0.06 1.37 7.46 -51.93 -0.39 0.99 16 24 H 0.07 1.55 7.15 -51.93 -0.37 1.18 16 25 H 0.03 0.54 4.61 -51.93 -0.24 0.30 16 26 H 0.27 6.61 8.31 -40.82 -0.34 6.27 16 27 H 0.09 1.26 8.14 -51.93 -0.42 0.84 16 28 H 0.11 2.10 7.02 -51.93 -0.36 1.73 16 29 H 0.13 1.78 7.22 -52.49 -0.38 1.40 16 30 H 0.13 1.27 8.06 -52.49 -0.42 0.84 16 31 H 0.13 1.36 8.06 -52.49 -0.42 0.94 16 LS Contribution 279.97 15.07 4.22 4.22 Total: -1.00 -30.42 279.97 -8.06 -38.48 By element: Atomic # 1 Polarization: 4.33 SS G_CDS: -2.95 Total: 1.38 kcal Atomic # 6 Polarization: -3.89 SS G_CDS: -3.11 Total: -7.00 kcal Atomic # 7 Polarization: -34.20 SS G_CDS: 0.22 Total: -33.98 kcal Atomic # 8 Polarization: -16.11 SS G_CDS: 0.09 Total: -16.03 kcal Atomic # 14 Polarization: 20.58 SS G_CDS: -5.03 Total: 15.56 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.50 Total: -2.64 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -30.42 -8.06 -38.48 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000528319542.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.303 kcal (2) G-P(sol) polarization free energy of solvation -30.421 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.882 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.478 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.825 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.31 seconds