Wall clock time and date at job start Mon Mar 30 2020 00:19:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.36941 * 119.99697 * 2 1 4 4 H 1.08000 * 119.99528 * 162.84754 * 3 2 1 5 5 C 1.38810 * 120.00172 * 342.84858 * 3 2 1 6 6 N 1.31617 * 119.99962 * 343.74725 * 5 3 2 7 7 Si 1.86793 * 119.99921 * 163.74533 * 5 3 2 8 8 H 1.48497 * 109.47079 * 90.00054 * 7 5 3 9 9 H 1.48501 * 109.47268 * 209.99841 * 7 5 3 10 10 H 1.48499 * 109.47242 * 329.99939 * 7 5 3 11 11 C 1.46499 * 120.00155 * 180.27172 * 2 1 3 12 12 C 1.50698 * 109.47280 * 269.73318 * 11 2 1 13 13 C 1.34170 * 126.92054 * 90.02067 * 12 11 2 14 14 Cl 1.73603 * 124.93280 * 359.96192 * 13 12 11 15 15 O 1.34440 * 110.12430 * 179.97438 * 13 12 11 16 16 C 1.34839 * 110.89782 * 359.97438 * 15 13 12 17 17 C 1.38912 * 133.46954 * 179.97438 * 16 15 13 18 18 C 1.37877 * 119.82159 * 180.02562 * 17 16 15 19 19 C 1.38727 * 120.68538 * 0.02562 * 18 17 16 20 20 C 1.36752 * 120.41210 * 359.97438 * 19 18 17 21 21 C 1.39412 * 119.71822 * 359.72157 * 20 19 18 22 22 H 1.09001 * 109.46715 * 84.85082 * 1 2 3 23 23 H 1.09002 * 109.47316 * 204.84515 * 1 2 3 24 24 H 1.08995 * 109.47496 * 324.85127 * 1 2 3 25 25 H 0.97003 * 119.99974 * 180.02562 * 6 5 3 26 26 H 1.09002 * 109.46489 * 29.72950 * 11 2 1 27 27 H 1.08995 * 109.46796 * 149.72662 * 11 2 1 28 28 H 1.08001 * 120.08922 * 359.97438 * 17 16 15 29 29 H 1.08003 * 119.65581 * 179.97438 * 18 17 16 30 30 H 1.07998 * 119.79428 * 179.97438 * 19 18 17 31 31 H 1.08002 * 120.13990 * 180.02562 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1497 1.1860 0.0000 4 1 3.1936 1.2067 0.2758 5 6 1.5019 2.3614 -0.3545 6 7 0.3497 2.3122 -0.9887 7 14 2.2654 4.0128 0.0687 8 1 3.1429 4.4525 -1.0457 9 1 1.1907 5.0160 0.2779 10 1 3.0697 3.8827 1.3102 11 6 2.1975 -1.2687 -0.0060 12 6 2.4545 -1.7072 1.4127 13 6 1.6631 -2.4784 2.1738 14 17 0.1422 -3.1456 1.6686 15 8 2.2192 -2.6589 3.3844 16 6 3.4006 -2.0149 3.4719 17 6 4.3468 -1.8868 4.4809 18 6 5.4853 -1.1404 4.2625 19 6 5.6976 -0.5133 3.0435 20 6 4.7786 -0.6268 2.0372 21 6 3.6244 -1.3826 2.2374 22 1 -0.3633 0.0922 -1.0235 23 1 -0.3634 -0.9326 0.4318 24 1 -0.3634 0.8402 0.5916 25 1 -0.1028 3.1336 -1.2368 26 1 1.6063 -2.0271 -0.5193 27 1 3.1478 -1.1370 -0.5235 28 1 4.1906 -2.3699 5.4341 29 1 6.2190 -1.0423 5.0490 30 1 6.5944 0.0682 2.8882 31 1 4.9486 -0.1370 1.0897 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000611255565.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:19:18 Heat of formation + Delta-G solvation = 56.334911 kcal Electronic energy + Delta-G solvation = -17712.383103 eV Core-core repulsion = 14794.476743 eV Total energy + Delta-G solvation = -2917.906361 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.14707 -37.68646 -36.69640 -35.76558 -32.88660 -30.91169 -30.18052 -28.94036 -26.25859 -25.57358 -23.06556 -22.08503 -21.56168 -19.56857 -17.37749 -16.90155 -16.46454 -16.08441 -15.68414 -14.81765 -14.06714 -13.75330 -13.58959 -13.38964 -13.05581 -12.79799 -12.32579 -12.01900 -11.65975 -11.57539 -11.23589 -11.02906 -10.80197 -10.72546 -10.60794 -10.26028 -10.02037 -9.82863 -9.49522 -8.53835 -8.40732 -7.77200 -6.83786 -5.71964 -3.13340 1.10264 1.44606 1.56655 2.57690 3.38148 3.45486 3.47962 3.58153 3.94437 4.52678 4.86007 5.07430 5.12796 5.22749 5.43143 5.46575 5.62282 5.68854 5.82939 6.00445 6.32292 6.37299 6.51212 6.53915 6.66327 6.74055 6.82587 6.84043 7.33185 7.44997 7.72174 7.83607 8.36338 9.22993 9.86441 10.33061 11.33142 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.015966 B = 0.008753 C = 0.006062 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1753.341190 B = 3198.244563 C = 4617.909167 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.160 3.840 2 N -0.590 5.590 3 C -0.252 4.252 4 H 0.070 0.930 5 C 0.001 3.999 6 N -0.906 5.906 7 Si 0.900 3.100 8 H -0.287 1.287 9 H -0.290 1.290 10 H -0.280 1.280 11 C 0.208 3.792 12 C -0.118 4.118 13 C 0.044 3.956 14 Cl 0.022 6.978 15 O -0.197 6.197 16 C 0.059 3.941 17 C -0.114 4.114 18 C -0.094 4.094 19 C -0.144 4.144 20 C -0.049 4.049 21 C -0.108 4.108 22 H 0.029 0.971 23 H 0.004 0.996 24 H 0.044 0.956 25 H 0.252 0.748 26 H 0.056 0.944 27 H 0.064 0.936 28 H 0.128 0.872 29 H 0.131 0.869 30 H 0.127 0.873 31 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.572 -9.603 7.620 13.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 N -0.311 5.311 3 C -0.381 4.381 4 H 0.087 0.913 5 C -0.197 4.197 6 N -0.551 5.551 7 Si 0.729 3.271 8 H -0.214 1.214 9 H -0.216 1.216 10 H -0.206 1.206 11 C 0.080 3.920 12 C -0.124 4.124 13 C -0.030 4.030 14 Cl 0.051 6.949 15 O -0.101 6.101 16 C 0.012 3.988 17 C -0.133 4.133 18 C -0.113 4.113 19 C -0.162 4.162 20 C -0.067 4.067 21 C -0.110 4.110 22 H 0.047 0.953 23 H 0.023 0.977 24 H 0.063 0.937 25 H 0.062 0.938 26 H 0.074 0.926 27 H 0.082 0.918 28 H 0.146 0.854 29 H 0.149 0.851 30 H 0.145 0.855 31 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 6.165 -9.644 7.691 13.790 hybrid contribution 0.006 1.002 0.301 1.046 sum 6.171 -8.642 7.993 13.291 Atomic orbital electron populations 1.20903 0.82042 0.96103 0.99431 1.43934 1.02013 1.00034 1.85102 1.19174 0.95170 0.84465 1.39280 0.91265 1.24865 0.97573 0.98058 0.99165 1.70121 1.17429 1.26335 1.41247 0.86331 0.78223 0.84175 0.78327 1.21436 1.21590 1.20560 1.19218 0.97143 0.89070 0.86606 1.22523 0.91728 0.96770 1.01421 1.21900 0.91525 1.04365 0.85226 1.98402 1.24945 1.84642 1.86913 1.83771 1.30648 1.62849 1.32815 1.19507 0.85896 0.96714 0.96708 1.19819 0.92772 1.03418 0.97262 1.20851 0.96163 0.96705 0.97540 1.20746 1.00124 1.01840 0.93540 1.20417 0.91280 0.95153 0.99845 1.19727 0.96436 1.01327 0.93493 0.95277 0.97703 0.93697 0.93778 0.92604 0.91814 0.85427 0.85108 0.85508 0.84966 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 27. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.16 3.98 8.97 59.85 0.54 4.52 16 2 N -0.59 -14.80 2.91 -182.50 -0.53 -15.33 16 3 C -0.25 -6.84 9.69 -15.06 -0.15 -6.99 16 4 H 0.07 1.82 7.71 -52.49 -0.40 1.41 16 5 C 0.00 0.03 5.05 -17.43 -0.09 -0.05 16 6 N -0.91 -26.44 10.56 55.49 0.59 -25.86 16 7 Si 0.90 21.93 29.58 -169.99 -5.03 16.90 16 8 H -0.29 -6.93 7.11 56.52 0.40 -6.52 16 9 H -0.29 -7.15 7.11 56.52 0.40 -6.75 16 10 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 11 C 0.21 4.33 5.98 -5.20 -0.03 4.30 16 12 C -0.12 -2.33 5.94 -102.61 -0.61 -2.94 16 13 C 0.04 0.81 7.83 29.30 0.23 1.04 16 14 Cl 0.02 0.36 27.22 -51.86 -1.41 -1.05 16 15 O -0.20 -3.61 10.58 3.85 0.04 -3.57 16 16 C 0.06 1.03 7.41 -38.48 -0.29 0.75 16 17 C -0.11 -1.59 10.07 -39.46 -0.40 -1.99 16 18 C -0.09 -1.16 10.01 -39.53 -0.40 -1.56 16 19 C -0.14 -1.95 9.98 -39.94 -0.40 -2.35 16 20 C -0.05 -0.81 10.05 -39.68 -0.40 -1.21 16 21 C -0.11 -2.02 6.38 -105.16 -0.67 -2.69 16 22 H 0.03 0.77 7.48 -51.93 -0.39 0.38 16 23 H 0.00 0.10 6.37 -51.93 -0.33 -0.23 16 24 H 0.04 1.22 7.03 -51.93 -0.36 0.86 16 25 H 0.25 7.14 8.31 -40.82 -0.34 6.80 16 26 H 0.06 1.08 7.79 -51.93 -0.40 0.67 16 27 H 0.06 1.28 8.04 -51.93 -0.42 0.87 16 28 H 0.13 1.44 8.06 -52.49 -0.42 1.01 16 29 H 0.13 1.15 8.06 -52.48 -0.42 0.73 16 30 H 0.13 1.36 8.06 -52.49 -0.42 0.94 16 31 H 0.13 2.15 7.89 -52.49 -0.41 1.74 16 LS Contribution 284.36 15.07 4.29 4.29 Total: -1.00 -30.36 284.36 -7.84 -38.21 By element: Atomic # 1 Polarization: -1.29 SS G_CDS: -3.13 Total: -4.42 kcal Atomic # 6 Polarization: -6.51 SS G_CDS: -2.66 Total: -9.17 kcal Atomic # 7 Polarization: -41.24 SS G_CDS: 0.05 Total: -41.19 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: 0.04 Total: -3.57 kcal Atomic # 14 Polarization: 21.93 SS G_CDS: -5.03 Total: 16.90 kcal Atomic # 17 Polarization: 0.36 SS G_CDS: -1.41 Total: -1.05 kcal Total LS contribution 4.29 Total: 4.29 kcal Total: -30.36 -7.84 -38.21 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000611255565.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 94.541 kcal (2) G-P(sol) polarization free energy of solvation -30.362 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.844 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.206 kcal (6) G-S(sol) free energy of system = (1) + (5) 56.335 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds