Wall clock time and date at job start Mon Mar 30 2020 00:04:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17399 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 N 1.46494 * 109.47383 * 332.74177 * 3 2 1 5 5 C 1.36937 * 120.00143 * 263.91610 * 4 3 2 6 6 H 1.08007 * 120.00203 * 199.35966 * 5 4 3 7 7 C 1.38809 * 119.99912 * 19.36378 * 5 4 3 8 8 N 1.31623 * 120.00112 * 22.31427 * 7 5 4 9 9 Si 1.86806 * 120.00015 * 202.31126 * 7 5 4 10 10 H 1.48504 * 109.46935 * 0.02562 * 9 7 5 11 11 H 1.48495 * 109.46813 * 119.99947 * 9 7 5 12 12 H 1.48498 * 109.47235 * 239.99966 * 9 7 5 13 13 C 1.46495 * 120.00058 * 83.91943 * 4 3 2 14 14 C 1.50702 * 109.47560 * 89.99976 * 13 4 3 15 15 C 1.38170 * 119.96958 * 89.99585 * 14 13 4 16 16 C 1.38715 * 119.97220 * 180.02562 * 15 14 13 17 17 O 1.35901 * 120.04605 * 179.97438 * 16 15 14 18 18 C 1.38726 * 119.90326 * 0.02562 * 16 15 14 19 19 C 1.38232 * 119.93067 * 359.97438 * 18 16 15 20 20 Cl 1.73605 * 119.98411 * 179.97438 * 19 18 16 21 21 C 1.38223 * 119.96384 * 269.72999 * 14 13 4 22 22 H 4.40632 * 5.51370 * 180.02562 * 4 1 2 23 23 H 1.09003 * 109.46758 * 212.74104 * 3 2 1 24 24 H 1.08998 * 109.47437 * 92.74410 * 3 2 1 25 25 H 0.97002 * 119.99658 * 179.97438 * 8 7 5 26 26 H 1.09001 * 109.47577 * 210.00157 * 13 4 3 27 27 H 1.09001 * 109.46963 * 329.99807 * 13 4 3 28 28 H 1.08009 * 120.00949 * 359.97438 * 15 14 13 29 29 H 0.96708 * 113.99816 * 90.00244 * 17 16 15 30 30 H 1.08007 * 120.03206 * 179.97438 * 18 16 15 31 31 H 1.07998 * 119.95417 * 359.97438 * 21 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1349 -1.2269 0.6326 5 6 3.4817 -1.2233 1.9573 6 1 4.1202 -2.0006 2.3506 7 6 3.0126 -0.2206 2.7948 8 7 1.9276 0.4516 2.4731 9 14 3.9210 0.1747 4.3785 10 1 5.1015 -0.7168 4.5077 11 1 4.3705 1.5897 4.3512 12 1 3.0134 -0.0341 5.5351 13 6 3.2530 -2.4583 -0.1521 14 6 4.6253 -2.5304 -0.7707 15 6 5.6594 -3.1405 -0.0870 16 6 6.9227 -3.2063 -0.6562 17 8 7.9411 -3.8056 0.0151 18 6 7.1453 -2.6586 -1.9111 19 6 6.1078 -2.0491 -2.5916 20 17 6.3849 -1.3626 -4.1618 21 6 4.8468 -1.9908 -2.0238 22 1 -1.0497 -0.0004 0.0000 23 1 3.0089 0.8653 0.5558 24 1 3.0094 0.0500 -1.0264 25 1 1.5996 1.1520 3.0585 26 1 3.1022 -3.3197 0.4986 27 1 2.4990 -2.4613 -0.9392 28 1 5.4844 -3.5652 0.8905 29 1 8.0273 -4.7520 -0.1642 30 1 8.1282 -2.7083 -2.3561 31 1 4.0361 -1.5185 -2.5586 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000897164552.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:04:44 Heat of formation + Delta-G solvation = 55.710139 kcal Electronic energy + Delta-G solvation = -17248.624112 eV Core-core repulsion = 14330.690659 eV Total energy + Delta-G solvation = -2917.933453 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -39.62408 -37.13092 -36.51679 -35.45746 -32.10275 -31.59694 -30.04158 -29.50058 -26.44061 -25.72660 -22.42819 -22.34819 -20.72518 -17.97466 -17.48332 -16.50061 -16.10451 -15.71862 -15.32901 -14.98273 -14.22939 -13.71824 -13.59927 -13.44020 -12.91765 -12.56516 -12.13516 -11.83718 -11.56477 -11.31812 -11.00154 -10.93359 -10.81773 -10.68255 -10.47690 -10.26268 -10.04296 -9.00936 -8.85075 -8.51441 -8.42907 -8.39560 -7.06811 -5.83703 -3.27429 1.35345 1.43370 2.22624 3.34902 3.44224 3.46260 3.71251 4.17628 4.31125 4.35286 4.51655 5.02887 5.26548 5.31623 5.40638 5.60054 5.67545 5.70735 5.79982 6.02735 6.18146 6.34158 6.47713 6.53124 6.68749 6.86768 6.93839 7.15578 7.37902 7.71518 7.72531 8.22022 9.03853 9.16049 9.70045 10.15612 11.19372 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.017697 B = 0.006600 C = 0.005318 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1581.779841 B = 4241.689493 C = 5264.268089 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.296 4.296 2 C -0.098 4.098 3 C 0.268 3.732 4 N -0.576 5.576 5 C -0.269 4.269 6 H 0.075 0.925 7 C 0.008 3.992 8 N -0.884 5.884 9 Si 0.897 3.103 10 H -0.277 1.277 11 H -0.288 1.288 12 H -0.291 1.291 13 C 0.179 3.821 14 C -0.049 4.049 15 C -0.120 4.120 16 C 0.111 3.889 17 O -0.496 6.496 18 C -0.154 4.154 19 C -0.020 4.020 20 Cl -0.081 7.081 21 C -0.112 4.112 22 H 0.191 0.809 23 H 0.093 0.907 24 H 0.037 0.963 25 H 0.255 0.745 26 H 0.064 0.936 27 H 0.053 0.947 28 H 0.133 0.867 29 H 0.387 0.613 30 H 0.130 0.870 31 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.960 -6.932 -9.836 13.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.316 4.316 2 C -0.101 4.101 3 C 0.143 3.857 4 N -0.295 5.295 5 C -0.398 4.398 6 H 0.093 0.907 7 C -0.192 4.192 8 N -0.526 5.526 9 Si 0.726 3.274 10 H -0.202 1.202 11 H -0.215 1.215 12 H -0.218 1.218 13 C 0.052 3.948 14 C -0.053 4.053 15 C -0.139 4.139 16 C 0.066 3.934 17 O -0.305 6.305 18 C -0.173 4.173 19 C -0.046 4.046 20 Cl -0.052 7.052 21 C -0.132 4.132 22 H 0.208 0.792 23 H 0.110 0.890 24 H 0.055 0.945 25 H 0.065 0.935 26 H 0.083 0.917 27 H 0.072 0.928 28 H 0.151 0.849 29 H 0.242 0.758 30 H 0.148 0.852 31 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 7.004 -6.162 -9.612 13.394 hybrid contribution 0.178 -0.009 0.752 0.773 sum 7.181 -6.171 -8.860 12.967 Atomic orbital electron populations 1.24179 0.95331 1.04228 1.07815 1.24206 0.95229 0.96698 0.93940 1.17722 0.82900 0.90956 0.94122 1.43970 1.74349 1.03922 1.07247 1.19176 1.24785 1.11628 0.84184 0.90730 1.24918 0.96011 1.00387 0.97861 1.70148 1.19223 1.25168 1.38079 0.86317 0.79595 0.78238 0.83210 1.20164 1.21465 1.21801 1.19827 0.89101 0.91140 0.94780 1.21044 0.99381 0.92872 0.92016 1.21459 0.91199 1.00806 1.00471 1.18271 0.87087 0.97805 0.90189 1.84865 1.50450 1.26788 1.68415 1.21071 0.98851 1.02592 0.94794 1.20659 0.95104 1.01105 0.87767 1.98347 1.96647 1.83780 1.26438 1.21000 0.95293 1.00911 0.95979 0.79224 0.88957 0.94460 0.93496 0.91740 0.92839 0.84932 0.75826 0.85172 0.85147 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -6.64 19.25 29.55 0.57 -6.07 16 2 C -0.10 -2.34 11.50 -37.12 -0.43 -2.76 16 3 C 0.27 6.21 5.41 -6.83 -0.04 6.18 16 4 N -0.58 -13.47 2.47 -177.95 -0.44 -13.91 16 5 C -0.27 -6.99 9.63 -15.06 -0.15 -7.13 16 6 H 0.07 1.90 7.92 -52.48 -0.42 1.49 16 7 C 0.01 0.21 4.82 -17.43 -0.08 0.13 16 8 N -0.88 -24.76 9.61 55.49 0.53 -24.22 16 9 Si 0.90 21.37 29.61 -169.99 -5.03 16.34 16 10 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 11 H -0.29 -6.95 7.11 56.52 0.40 -6.54 16 12 H -0.29 -7.03 7.11 56.52 0.40 -6.63 16 13 C 0.18 3.41 5.80 -5.20 -0.03 3.38 16 14 C -0.05 -0.84 5.46 -104.65 -0.57 -1.41 16 15 C -0.12 -1.95 9.64 -39.43 -0.38 -2.33 16 16 C 0.11 1.64 6.70 -39.22 -0.26 1.38 16 17 O -0.50 -6.43 13.50 -19.43 -0.26 -6.69 16 18 C -0.15 -2.17 9.77 -39.40 -0.38 -2.55 16 19 C -0.02 -0.29 6.32 -39.52 -0.25 -0.54 16 20 Cl -0.08 -1.06 28.95 -51.86 -1.50 -2.56 16 21 C -0.11 -1.76 9.48 -39.52 -0.37 -2.14 16 22 H 0.19 3.56 7.80 -54.10 -0.42 3.14 16 23 H 0.09 2.37 6.59 -51.93 -0.34 2.02 16 24 H 0.04 0.76 8.12 -51.93 -0.42 0.34 16 25 H 0.25 7.02 8.31 -40.82 -0.34 6.68 16 26 H 0.06 1.21 7.98 -51.93 -0.41 0.80 16 27 H 0.05 0.96 8.01 -51.93 -0.42 0.55 16 28 H 0.13 2.15 8.06 -52.48 -0.42 1.73 16 29 H 0.39 2.87 9.06 45.56 0.41 3.28 16 30 H 0.13 1.60 8.06 -52.48 -0.42 1.18 16 31 H 0.13 1.94 8.06 -52.49 -0.42 1.51 16 LS Contribution 297.21 15.07 4.48 4.48 Total: -1.00 -29.97 297.21 -7.02 -37.00 By element: Atomic # 1 Polarization: 5.87 SS G_CDS: -2.42 Total: 3.45 kcal Atomic # 6 Polarization: -11.50 SS G_CDS: -2.38 Total: -13.87 kcal Atomic # 7 Polarization: -38.23 SS G_CDS: 0.09 Total: -38.14 kcal Atomic # 8 Polarization: -6.43 SS G_CDS: -0.26 Total: -6.69 kcal Atomic # 14 Polarization: 21.37 SS G_CDS: -5.03 Total: 16.34 kcal Atomic # 17 Polarization: -1.06 SS G_CDS: -1.50 Total: -2.56 kcal Total LS contribution 4.48 Total: 4.48 kcal Total: -29.97 -7.02 -37.00 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000897164552.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 92.709 kcal (2) G-P(sol) polarization free energy of solvation -29.975 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.735 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.024 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.999 kcal (6) G-S(sol) free energy of system = (1) + (5) 55.710 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds