Wall clock time and date at job start Sun Mar 29 2020 23:58:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50699 * 1 3 3 C 1.38294 * 119.87532 * 2 1 4 4 C 1.37949 * 120.21696 * 179.76481 * 3 2 1 5 5 C 1.39664 * 119.95539 * 0.46809 * 4 3 2 6 6 C 1.43207 * 120.12267 * 179.78874 * 5 4 3 7 7 N 4.80184 * 137.01428 * 359.97438 * 3 1 2 8 8 C 1.39537 * 119.75520 * 359.51216 * 5 4 3 9 9 C 1.38485 * 119.78659 * 0.25039 * 8 5 4 10 10 O 1.35905 * 119.98203 * 179.97438 * 9 8 5 11 11 C 1.42896 * 116.99987 * 356.71310 * 10 9 8 12 12 H 1.09003 * 109.47142 * 26.95346 * 11 10 9 13 13 C 1.50707 * 109.47187 * 146.94872 * 11 10 9 14 14 H 1.08002 * 119.99328 * 359.97438 * 13 11 10 15 15 C 1.37877 * 120.00011 * 180.02562 * 13 11 10 16 16 N 1.31509 * 120.00140 * 359.97438 * 15 13 11 17 17 Si 1.86803 * 119.99642 * 179.97438 * 15 13 11 18 18 H 1.48501 * 109.47067 * 60.00083 * 17 15 13 19 19 H 1.48500 * 109.46869 * 180.02562 * 17 15 13 20 20 H 1.48500 * 109.47258 * 299.99975 * 17 15 13 21 21 C 1.53002 * 109.47661 * 266.94750 * 11 10 9 22 22 Cl 1.80300 * 109.46856 * 64.99769 * 21 11 10 23 23 H 1.09004 * 109.46925 * 270.02016 * 1 2 3 24 24 H 1.08997 * 109.47398 * 30.02261 * 1 2 3 25 25 H 1.09001 * 109.46735 * 150.02476 * 1 2 3 26 26 H 1.08005 * 119.89007 * 359.97438 * 3 2 1 27 27 H 1.07999 * 120.02568 * 180.22750 * 4 3 2 28 28 H 1.07998 * 120.11065 * 180.28183 * 8 5 4 29 29 H 0.96995 * 119.99794 * 180.02562 * 16 15 13 30 30 H 1.08998 * 109.47185 * 184.99977 * 21 11 10 31 31 H 1.08995 * 109.46718 * 305.00081 * 21 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1959 1.1992 0.0000 4 6 3.5753 1.2074 0.0049 5 6 4.2799 0.0015 0.0000 6 6 5.7120 0.0059 0.0005 7 7 6.8480 0.0093 0.0015 8 6 3.5834 -1.2076 0.0004 9 6 2.1985 -1.2037 0.0005 10 8 1.5161 -2.3790 0.0004 11 6 2.2896 -3.5783 -0.0727 12 1 3.2783 -3.3993 0.3499 13 6 1.6003 -4.6689 0.7062 14 1 0.6653 -4.4662 1.2073 15 6 2.1640 -5.9251 0.7799 16 7 3.3027 -6.1717 0.1701 17 14 1.3099 -7.2766 1.7460 18 1 -0.0371 -7.5210 1.1706 19 1 2.1143 -8.5227 1.6709 20 1 1.1739 -6.8606 3.1651 21 6 2.4298 -4.0065 -1.5349 22 17 3.3828 -2.7686 -2.4349 23 1 -0.3633 0.0004 1.0277 24 1 -0.3634 0.8897 -0.5142 25 1 -0.3633 -0.8902 -0.5135 26 1 1.6520 2.1323 -0.0004 27 1 4.1101 2.1457 0.0086 28 1 4.1224 -2.1434 0.0013 29 1 3.6990 -7.0555 0.2217 30 1 2.9428 -4.9669 -1.5846 31 1 1.4404 -4.0995 -1.9826 RHF calculation, no. of doubly occupied orbitals= 45 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001226877831.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 29 2020 23:58:12 Heat of formation + Delta-G solvation = -4.356390 kcal Electronic energy + Delta-G solvation = -17476.646631 eV Core-core repulsion = 14556.108499 eV Total energy + Delta-G solvation = -2920.538133 eV No. of doubly occupied orbitals = 45 Molecular weight (most abundant/longest-lived isotopes) = 265.061 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -39.86200 -37.41467 -36.07842 -34.90822 -33.55401 -32.54315 -30.11441 -29.11563 -27.12300 -25.40259 -23.18535 -22.03710 -20.57540 -18.96481 -16.95059 -16.17124 -15.51582 -15.21606 -14.77047 -14.65310 -13.89106 -13.56895 -13.42871 -13.05410 -12.94122 -12.72530 -12.64001 -12.09022 -12.00561 -11.77817 -11.42630 -11.28375 -11.10343 -11.01690 -10.88822 -10.74170 -10.31195 -9.78682 -9.50738 -9.28124 -8.74866 -8.44918 -7.52853 -6.49814 -4.58293 1.08318 1.76567 2.92221 3.10039 3.17090 3.18895 3.24728 3.32648 3.93394 4.15542 4.20216 4.30831 4.86665 5.09727 5.21901 5.32804 5.57463 5.82794 5.87761 5.95849 6.02303 6.15242 6.18040 6.38557 6.48182 6.57270 6.65335 6.83921 6.99989 7.11254 7.46953 7.67459 7.73454 8.18834 8.57658 9.09990 10.57238 Molecular weight = 265.06amu Principal moments of inertia in cm(-1) A = 0.019324 B = 0.006865 C = 0.006141 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1448.653344 B = 4077.876362 C = 4558.419019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.104 4.104 2 C -0.104 4.104 3 C -0.092 4.092 4 C -0.122 4.122 5 C -0.007 4.007 6 C 0.266 3.734 7 N -0.434 5.434 8 C -0.142 4.142 9 C 0.156 3.844 10 O -0.302 6.302 11 C 0.204 3.796 12 H 0.051 0.949 13 C -0.523 4.523 14 H 0.077 0.923 15 C 0.065 3.935 16 N -0.888 5.888 17 Si 0.917 3.083 18 H -0.272 1.272 19 H -0.283 1.283 20 H -0.272 1.272 21 C -0.037 4.037 22 Cl -0.240 7.240 23 H 0.068 0.932 24 H 0.060 0.940 25 H 0.074 0.926 26 H 0.130 0.870 27 H 0.124 0.876 28 H 0.146 0.854 29 H 0.274 0.726 30 H 0.134 0.866 31 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.560 9.170 -0.967 10.287 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.161 4.161 2 C -0.106 4.106 3 C -0.111 4.111 4 C -0.143 4.143 5 C -0.011 4.011 6 C -0.049 4.049 7 N -0.109 5.109 8 C -0.163 4.163 9 C 0.108 3.892 10 O -0.215 6.215 11 C 0.149 3.851 12 H 0.068 0.932 13 C -0.561 4.561 14 H 0.096 0.904 15 C -0.139 4.139 16 N -0.525 5.525 17 Si 0.743 3.257 18 H -0.197 1.197 19 H -0.208 1.208 20 H -0.197 1.197 21 C -0.100 4.100 22 Cl -0.215 7.215 23 H 0.086 0.914 24 H 0.079 0.921 25 H 0.093 0.907 26 H 0.148 0.852 27 H 0.142 0.858 28 H 0.164 0.836 29 H 0.084 0.916 30 H 0.152 0.848 31 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -2.799 9.037 -1.061 9.520 hybrid contribution -0.401 -0.898 0.280 1.022 sum -3.200 8.139 -0.781 8.780 Atomic orbital electron populations 1.20614 0.90550 1.02697 1.02243 1.19452 0.96659 0.90479 1.03990 1.20620 0.93193 0.96884 1.00354 1.20810 0.94127 0.95978 1.03389 1.15709 0.83918 0.94487 1.06979 1.25805 0.92789 0.93094 0.93181 1.81171 1.12179 1.08011 1.09555 1.21540 0.94043 0.98163 1.02538 1.18715 0.89579 0.87439 0.93434 1.86165 1.36899 1.12425 1.85967 1.20583 0.93470 0.79792 0.91228 0.93186 1.20950 1.09398 0.93791 1.31969 0.90444 1.24984 0.94813 0.98701 0.95407 1.69777 1.17221 1.23417 1.42046 0.86225 0.79363 0.79811 0.80299 1.19675 1.20850 1.19682 1.25795 0.96535 0.94152 0.93493 1.98651 1.78406 1.63907 1.80490 0.91367 0.92076 0.90696 0.85183 0.85772 0.83607 0.91631 0.84820 0.90516 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -1.34 9.78 36.01 0.35 -0.99 16 2 C -0.10 -1.57 5.90 -104.39 -0.62 -2.18 16 3 C -0.09 -1.16 9.67 -39.67 -0.38 -1.55 16 4 C -0.12 -1.61 9.75 -39.16 -0.38 -2.00 16 5 C -0.01 -0.12 5.73 -106.95 -0.61 -0.73 16 6 C 0.27 4.55 15.33 -22.47 -0.34 4.21 16 7 N -0.43 -8.03 18.54 41.84 0.78 -7.25 16 8 C -0.14 -2.58 6.74 -39.01 -0.26 -2.84 16 9 C 0.16 2.84 5.94 -39.27 -0.23 2.61 16 10 O -0.30 -6.28 8.76 -19.44 -0.17 -6.45 16 11 C 0.20 4.64 2.19 -27.88 -0.06 4.58 16 12 H 0.05 1.22 5.39 -51.93 -0.28 0.94 16 13 C -0.52 -12.91 8.89 -34.44 -0.31 -13.22 16 14 H 0.08 1.90 7.81 -52.49 -0.41 1.49 16 15 C 0.06 1.58 5.29 -17.82 -0.09 1.49 16 16 N -0.89 -22.46 11.29 55.43 0.63 -21.83 16 17 Si 0.92 19.26 29.54 -169.99 -5.02 14.24 16 18 H -0.27 -5.63 7.11 56.52 0.40 -5.22 16 19 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 20 H -0.27 -5.71 7.11 56.52 0.40 -5.30 16 21 C -0.04 -0.80 6.17 37.16 0.23 -0.57 16 22 Cl -0.24 -4.77 25.60 -51.86 -1.33 -6.10 16 23 H 0.07 0.82 8.14 -51.93 -0.42 0.40 16 24 H 0.06 0.62 8.08 -51.93 -0.42 0.20 16 25 H 0.07 1.07 7.52 -51.93 -0.39 0.68 16 26 H 0.13 1.21 8.06 -52.48 -0.42 0.78 16 27 H 0.12 1.32 8.06 -52.49 -0.42 0.90 16 28 H 0.15 2.94 5.10 -52.49 -0.27 2.68 16 29 H 0.27 6.63 8.31 -40.82 -0.34 6.29 16 30 H 0.13 3.14 5.95 -51.93 -0.31 2.83 16 31 H 0.08 1.60 8.14 -51.93 -0.42 1.18 16 LS Contribution 286.99 15.07 4.32 4.32 Total: -1.00 -25.54 286.99 -6.41 -31.95 By element: Atomic # 1 Polarization: 5.22 SS G_CDS: -2.90 Total: 2.31 kcal Atomic # 6 Polarization: -8.47 SS G_CDS: -2.71 Total: -11.19 kcal Atomic # 7 Polarization: -30.49 SS G_CDS: 1.40 Total: -29.09 kcal Atomic # 8 Polarization: -6.28 SS G_CDS: -0.17 Total: -6.45 kcal Atomic # 14 Polarization: 19.26 SS G_CDS: -5.02 Total: 14.24 kcal Atomic # 17 Polarization: -4.77 SS G_CDS: -1.33 Total: -6.10 kcal Total LS contribution 4.32 Total: 4.32 kcal Total: -25.54 -6.41 -31.95 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001226877831.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.593 kcal (2) G-P(sol) polarization free energy of solvation -25.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.949 kcal (6) G-S(sol) free energy of system = (1) + (5) -4.356 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds