Wall clock time and date at job start Mon Mar 30 2020 00:15:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17406 * 1 3 3 C 1.47197 * 179.97438 * 2 1 4 4 N 1.46498 * 109.46676 * 171.07009 * 3 2 1 5 5 C 1.36934 * 119.99857 * 266.06277 * 4 3 2 6 6 H 1.08008 * 120.00112 * 194.29867 * 5 4 3 7 7 C 1.38811 * 120.00438 * 14.30058 * 5 4 3 8 8 N 1.31618 * 119.99550 * 23.23995 * 7 5 4 9 9 Si 1.86793 * 120.00294 * 203.24854 * 7 5 4 10 10 H 1.48500 * 109.47230 * 59.99554 * 9 7 5 11 11 H 1.48502 * 109.47204 * 179.97438 * 9 7 5 12 12 H 1.48504 * 109.47247 * 299.99587 * 9 7 5 13 13 C 1.46504 * 120.00016 * 86.06386 * 4 3 2 14 14 C 1.50700 * 109.47205 * 269.99824 * 13 4 3 15 15 C 1.38451 * 120.02662 * 270.25657 * 14 13 4 16 16 F 1.35099 * 120.00986 * 359.97438 * 15 14 13 17 17 C 1.38444 * 119.97703 * 180.24865 * 15 14 13 18 18 C 1.38229 * 120.02298 * 359.47529 * 17 15 14 19 19 C 1.38188 * 120.05235 * 0.28859 * 18 17 15 20 20 C 1.50697 * 119.99006 * 179.97438 * 19 18 17 21 21 C 1.38399 * 120.02701 * 89.99807 * 14 13 4 22 22 F 1.35095 * 120.00967 * 359.97438 * 21 14 13 23 23 H 4.40639 * 5.51500 * 179.97438 * 4 1 2 24 24 H 1.08995 * 109.47158 * 51.06969 * 3 2 1 25 25 H 1.09006 * 109.46768 * 291.06246 * 3 2 1 26 26 H 0.96996 * 119.99700 * 180.02562 * 8 7 5 27 27 H 1.09000 * 109.46896 * 149.99872 * 13 4 3 28 28 H 1.08997 * 109.47479 * 29.99888 * 13 4 3 29 29 H 1.07996 * 119.99322 * 179.74874 * 17 15 14 30 30 H 1.08004 * 119.98114 * 180.27684 * 18 17 15 31 31 H 1.09011 * 109.47181 * 90.00586 * 20 19 18 32 32 H 1.09000 * 109.47450 * 210.00225 * 20 19 18 33 33 H 1.08997 * 109.47639 * 330.00975 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1741 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1336 1.3654 -0.2144 5 6 3.4384 1.7927 -1.4791 6 1 4.0078 2.6996 -1.6202 7 6 3.0155 1.0605 -2.5800 8 7 1.9800 0.2547 -2.4760 9 14 3.9161 1.2186 -4.2089 10 1 5.3339 0.8139 -4.0319 11 1 3.2729 0.3388 -5.2176 12 1 3.8578 2.6284 -4.6720 13 6 3.2952 2.2729 0.9243 14 6 2.0140 3.0350 1.1451 15 6 1.8072 4.2435 0.5019 16 9 2.7542 4.7404 -0.3236 17 6 0.6320 4.9453 0.7095 18 6 -0.3393 4.4346 1.5500 19 6 -0.1361 3.2261 2.1887 20 6 -1.1957 2.6710 3.1052 21 6 1.0410 2.5249 1.9867 22 9 1.2390 1.3430 2.6104 23 1 -1.0503 -0.0004 -0.0001 24 1 3.0096 -0.6449 -0.7994 25 1 3.0095 -0.3685 0.9591 26 1 1.6848 -0.2572 -3.2451 27 1 4.1041 2.9739 0.7183 28 1 3.5333 1.6959 1.8179 29 1 0.4721 5.8899 0.2111 30 1 -1.2578 4.9805 1.7080 31 1 -1.8802 2.0452 2.5323 32 1 -0.7244 2.0736 3.8857 33 1 -1.7491 3.4923 3.5605 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000930315584.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:15:41 Heat of formation + Delta-G solvation = 16.928882 kcal Electronic energy + Delta-G solvation = -20533.276038 eV Core-core repulsion = 17197.697318 eV Total energy + Delta-G solvation = -3335.578720 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 265.097 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -48.36740 -48.25485 -38.51860 -36.13590 -32.72811 -31.53618 -31.31654 -29.96003 -26.57330 -26.08065 -25.69048 -22.48314 -21.59616 -20.22268 -17.57487 -17.52655 -16.78002 -16.32272 -15.51269 -15.26065 -14.88416 -14.60369 -14.52565 -13.84955 -13.65839 -13.47743 -13.40255 -13.08955 -12.63863 -12.50824 -11.80628 -11.58973 -11.52878 -11.27247 -11.01476 -10.85549 -10.81694 -10.64733 -10.29798 -9.96819 -8.94872 -8.80684 -8.41602 -8.18768 -8.01437 -7.11188 -5.82824 -3.19529 1.50884 1.55197 3.37877 3.43600 3.44910 3.82027 4.25489 4.46235 4.54602 4.56914 4.97240 5.03152 5.07253 5.23271 5.39969 5.47008 5.65456 5.75938 5.81054 5.91644 5.97665 6.07392 6.27486 6.44148 6.52658 6.58228 6.63082 6.69616 6.72596 7.23483 7.35223 7.45649 7.75126 8.20822 9.06279 9.26912 9.70433 10.15444 11.19631 Molecular weight = 265.10amu Principal moments of inertia in cm(-1) A = 0.021515 B = 0.008546 C = 0.007234 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1301.125195 B = 3275.611638 C = 3869.666154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.300 4.300 2 C -0.089 4.089 3 C 0.266 3.734 4 N -0.570 5.570 5 C -0.261 4.261 6 H 0.081 0.919 7 C 0.004 3.996 8 N -0.883 5.883 9 Si 0.903 3.097 10 H -0.282 1.282 11 H -0.291 1.291 12 H -0.283 1.283 13 C 0.179 3.821 14 C -0.153 4.153 15 C 0.135 3.865 16 F -0.129 7.129 17 C -0.169 4.169 18 C -0.086 4.086 19 C -0.139 4.139 20 C -0.105 4.105 21 C 0.138 3.862 22 F -0.130 7.130 23 H 0.186 0.814 24 H 0.098 0.902 25 H 0.039 0.961 26 H 0.256 0.744 27 H 0.067 0.933 28 H 0.059 0.941 29 H 0.131 0.869 30 H 0.130 0.870 31 H 0.070 0.930 32 H 0.065 0.935 33 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.384 5.355 9.639 11.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.320 4.320 2 C -0.091 4.091 3 C 0.141 3.859 4 N -0.287 5.287 5 C -0.390 4.390 6 H 0.098 0.902 7 C -0.196 4.196 8 N -0.525 5.525 9 Si 0.732 3.268 10 H -0.209 1.209 11 H -0.217 1.217 12 H -0.209 1.209 13 C 0.051 3.949 14 C -0.159 4.159 15 C 0.115 3.885 16 F -0.108 7.108 17 C -0.188 4.188 18 C -0.104 4.104 19 C -0.140 4.140 20 C -0.162 4.162 21 C 0.118 3.882 22 F -0.109 7.109 23 H 0.203 0.797 24 H 0.116 0.884 25 H 0.057 0.943 26 H 0.066 0.934 27 H 0.085 0.915 28 H 0.077 0.923 29 H 0.148 0.852 30 H 0.148 0.852 31 H 0.089 0.911 32 H 0.084 0.916 33 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -3.322 5.169 9.449 11.271 hybrid contribution -0.105 0.077 -1.325 1.331 sum -3.427 5.246 8.124 10.260 Atomic orbital electron populations 1.24028 0.95170 1.04265 1.08489 1.24072 0.95076 0.96564 0.93430 1.17944 0.83130 0.86712 0.98132 1.44562 1.73656 1.07376 1.03127 1.19315 1.27932 1.09897 0.81857 0.90160 1.24932 0.96542 1.00243 0.97886 1.70157 1.22046 1.30238 1.30098 0.86348 0.79685 0.77539 0.83183 1.20861 1.21704 1.20907 1.19956 0.90932 0.92263 0.91701 1.21179 1.02597 0.94826 0.97252 1.17107 0.87122 0.92646 0.91665 1.91491 1.63107 1.86798 1.69369 1.21024 0.93667 1.01695 1.02442 1.20455 0.98558 0.94864 0.96558 1.19807 0.95313 0.96571 1.02318 1.20617 0.96736 1.00869 0.97951 1.16907 0.94047 0.82442 0.94831 1.91453 1.95175 1.44026 1.80227 0.79701 0.88375 0.94323 0.93377 0.91464 0.92298 0.85154 0.85193 0.91133 0.91559 0.91596 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -7.06 19.17 29.55 0.57 -6.49 16 2 C -0.09 -2.19 9.51 -37.12 -0.35 -2.54 16 3 C 0.27 6.40 5.47 -6.83 -0.04 6.37 16 4 N -0.57 -14.01 2.48 -177.95 -0.44 -14.45 16 5 C -0.26 -7.01 9.68 -15.06 -0.15 -7.16 16 6 H 0.08 2.15 7.91 -52.48 -0.42 1.73 16 7 C 0.00 0.10 4.86 -17.43 -0.08 0.01 16 8 N -0.88 -25.08 9.39 55.49 0.52 -24.56 16 9 Si 0.90 21.65 29.61 -169.99 -5.03 16.61 16 10 H -0.28 -6.66 7.11 56.52 0.40 -6.25 16 11 H -0.29 -7.06 7.11 56.52 0.40 -6.66 16 12 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 13 C 0.18 3.76 5.47 -5.19 -0.03 3.73 16 14 C -0.15 -3.11 5.27 -104.48 -0.55 -3.66 16 15 C 0.14 2.67 7.24 -39.43 -0.29 2.38 16 16 F -0.13 -2.69 16.48 2.25 0.04 -2.66 16 17 C -0.17 -2.79 10.02 -39.51 -0.40 -3.19 16 18 C -0.09 -1.27 9.70 -39.60 -0.38 -1.66 16 19 C -0.14 -2.25 5.89 -104.55 -0.62 -2.87 16 20 C -0.11 -1.35 9.83 36.00 0.35 -1.00 16 21 C 0.14 2.62 6.30 -39.43 -0.25 2.38 16 22 F -0.13 -2.52 14.66 2.25 0.03 -2.48 16 23 H 0.19 3.77 7.80 -54.08 -0.42 3.34 16 24 H 0.10 2.55 6.39 -51.93 -0.33 2.22 16 25 H 0.04 0.83 7.95 -51.93 -0.41 0.42 16 26 H 0.26 7.17 8.31 -40.82 -0.34 6.83 16 27 H 0.07 1.37 7.53 -51.93 -0.39 0.98 16 28 H 0.06 1.13 7.43 -51.93 -0.39 0.75 16 29 H 0.13 1.81 8.06 -52.49 -0.42 1.39 16 30 H 0.13 1.48 8.06 -52.48 -0.42 1.06 16 31 H 0.07 0.90 8.14 -51.92 -0.42 0.48 16 32 H 0.07 0.84 7.64 -51.93 -0.40 0.44 16 33 H 0.07 0.67 8.08 -51.93 -0.42 0.25 16 LS Contribution 295.65 15.07 4.46 4.46 Total: -1.00 -29.99 295.65 -6.22 -36.21 By element: Atomic # 1 Polarization: 4.14 SS G_CDS: -3.58 Total: 0.56 kcal Atomic # 6 Polarization: -11.48 SS G_CDS: -2.21 Total: -13.69 kcal Atomic # 7 Polarization: -39.09 SS G_CDS: 0.08 Total: -39.01 kcal Atomic # 9 Polarization: -5.21 SS G_CDS: 0.07 Total: -5.14 kcal Atomic # 14 Polarization: 21.65 SS G_CDS: -5.03 Total: 16.61 kcal Total LS contribution 4.46 Total: 4.46 kcal Total: -29.99 -6.22 -36.21 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000930315584.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.134 kcal (2) G-P(sol) polarization free energy of solvation -29.990 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.144 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.205 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.929 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds