Wall clock time and date at job start Mon Mar 30 2020 00:19:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53002 * 110.00113 * 2 1 4 4 F 1.39902 * 109.46697 * 298.90657 * 3 2 1 5 5 C 1.54333 * 109.78230 * 121.16768 * 2 1 3 6 6 C 1.55152 * 103.02524 * 97.48958 * 5 2 1 7 7 F 1.39901 * 111.00703 * 277.23925 * 6 5 2 8 8 F 1.39901 * 111.00677 * 153.37783 * 6 5 2 9 9 C 1.54912 * 101.57852 * 35.30871 * 6 5 2 10 10 N 1.47025 * 109.87844 * 238.90289 * 2 1 3 11 11 C 1.34775 * 125.64803 * 59.56367 * 10 2 1 12 12 O 1.21283 * 119.99917 * 359.71056 * 11 10 2 13 13 C 1.50703 * 120.00072 * 179.71609 * 11 10 2 14 14 C 1.50701 * 109.47151 * 180.02562 * 13 11 10 15 15 H 1.08002 * 119.99761 * 359.97438 * 14 13 11 16 16 C 1.37871 * 119.99694 * 180.27762 * 14 13 11 17 17 N 1.31514 * 120.00482 * 359.71466 * 16 14 13 18 18 Si 1.86801 * 119.99746 * 179.72062 * 16 14 13 19 19 H 1.48504 * 109.47209 * 89.99886 * 18 16 14 20 20 H 1.48501 * 109.47358 * 209.99377 * 18 16 14 21 21 H 1.48496 * 109.47341 * 329.99989 * 18 16 14 22 22 H 1.08996 * 109.47173 * 181.09740 * 1 2 3 23 23 H 1.08999 * 109.46863 * 301.09506 * 1 2 3 24 24 H 1.09000 * 109.46944 * 61.09271 * 1 2 3 25 25 H 1.08995 * 109.46794 * 58.90217 * 3 2 1 26 26 H 1.08996 * 109.47223 * 178.90836 * 3 2 1 27 27 H 1.09005 * 110.84668 * 339.02705 * 5 2 1 28 28 H 1.08996 * 110.66799 * 215.87898 * 5 2 1 29 29 H 1.09003 * 110.36897 * 204.14901 * 9 6 5 30 30 H 1.09005 * 110.36540 * 81.82681 * 9 6 5 31 31 H 1.09000 * 109.47088 * 59.99268 * 13 11 10 32 32 H 1.09007 * 109.46560 * 299.99774 * 13 11 10 33 33 H 0.96995 * 120.00207 * 179.97438 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0533 1.4377 0.0000 4 9 1.6137 2.0939 -1.1547 5 6 2.0523 -0.7516 1.2426 6 6 2.3561 -2.1698 0.6915 7 9 1.1958 -2.9502 0.6484 8 9 3.3530 -2.7980 1.4456 9 6 2.8612 -1.8466 -0.7369 10 7 2.0299 -0.7141 -1.1840 11 6 1.7753 -0.3845 -2.4657 12 8 1.0745 0.5727 -2.7179 13 6 2.3611 -1.2054 -3.5855 14 6 1.9280 -0.6306 -4.9096 15 1 1.2918 0.2417 -4.9373 16 6 2.3388 -1.2220 -6.0853 17 7 3.1133 -2.2844 -6.0515 18 14 1.7956 -0.5141 -7.7264 19 1 2.7833 0.4977 -8.1804 20 1 1.7067 -1.6043 -8.7308 21 1 0.4651 0.1272 -7.5728 22 1 -0.3633 -1.0274 0.0197 23 1 -0.3633 0.5308 0.8800 24 1 -0.3633 0.4968 -0.8996 25 1 1.6788 1.9606 0.8800 26 1 3.1431 1.4277 0.0196 27 1 1.2886 -0.7951 2.0191 28 1 2.9601 -0.2828 1.6224 29 1 2.7177 -2.7049 -1.3933 30 1 3.9123 -1.5589 -0.7115 31 1 2.0107 -2.2343 -3.5035 32 1 3.4490 -1.1858 -3.5197 33 1 3.4020 -2.7006 -6.8786 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001143194418.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:19:02 Heat of formation + Delta-G solvation = -184.196562 kcal Electronic energy + Delta-G solvation = -21453.904515 eV Core-core repulsion = 17678.835117 eV Total energy + Delta-G solvation = -3775.069398 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 265.103 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -48.96889 -47.16579 -47.11797 -39.62309 -36.84592 -33.06576 -32.39248 -30.40608 -28.70678 -26.95825 -25.80274 -23.89457 -22.21189 -20.79505 -18.47447 -17.78569 -17.12421 -16.26252 -16.01583 -15.83418 -15.77651 -15.23352 -14.88806 -14.56359 -14.34794 -14.12238 -13.76743 -13.48839 -13.12327 -12.90973 -12.65721 -12.49851 -12.38028 -12.11246 -11.92283 -11.51425 -11.20468 -10.89074 -10.84585 -10.71306 -10.65661 -10.57153 -9.94483 -9.27775 -8.63507 -8.44873 -8.31339 -6.07363 -4.07019 3.05873 3.34948 3.40221 3.46607 3.49947 3.59765 3.66239 3.96828 4.29695 4.47322 4.65657 4.75720 4.85751 5.06495 5.17836 5.25826 5.30983 5.48452 5.55297 5.63943 5.66315 5.76312 5.95911 6.02673 6.40906 6.72499 7.12804 7.27441 7.87200 7.95443 8.30599 9.03600 9.13717 9.58207 11.04985 Molecular weight = 265.10amu Principal moments of inertia in cm(-1) A = 0.023835 B = 0.006523 C = 0.005554 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1174.449400 B = 4291.755001 C = 5040.612401 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C 0.130 3.870 3 C 0.063 3.937 4 F -0.185 7.185 5 C -0.156 4.156 6 C 0.273 3.727 7 F -0.182 7.182 8 F -0.187 7.187 9 C 0.076 3.924 10 N -0.625 5.625 11 C 0.531 3.469 12 O -0.504 6.504 13 C 0.012 3.988 14 C -0.508 4.508 15 H 0.076 0.924 16 C 0.055 3.945 17 N -0.901 5.901 18 Si 0.902 3.098 19 H -0.280 1.280 20 H -0.287 1.287 21 H -0.272 1.272 22 H 0.064 0.936 23 H 0.061 0.939 24 H 0.085 0.915 25 H 0.075 0.925 26 H 0.070 0.930 27 H 0.107 0.893 28 H 0.108 0.892 29 H 0.107 0.893 30 H 0.097 0.903 31 H 0.047 0.953 32 H 0.047 0.953 33 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.231 1.420 17.086 17.146 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C 0.044 3.956 3 C 0.007 3.993 4 F -0.166 7.166 5 C -0.195 4.195 6 C 0.236 3.764 7 F -0.163 7.163 8 F -0.168 7.168 9 C -0.049 4.049 10 N -0.365 5.365 11 C 0.323 3.677 12 O -0.376 6.376 13 C -0.027 4.027 14 C -0.547 4.547 15 H 0.094 0.906 16 C -0.145 4.145 17 N -0.540 5.540 18 Si 0.730 3.270 19 H -0.206 1.206 20 H -0.213 1.213 21 H -0.196 1.196 22 H 0.083 0.917 23 H 0.080 0.920 24 H 0.104 0.896 25 H 0.093 0.907 26 H 0.089 0.911 27 H 0.125 0.875 28 H 0.127 0.873 29 H 0.125 0.875 30 H 0.115 0.885 31 H 0.065 0.935 32 H 0.065 0.935 33 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges -0.128 1.851 16.665 16.768 hybrid contribution -0.101 -0.056 -0.680 0.690 sum -0.228 1.795 15.985 16.087 Atomic orbital electron populations 1.22170 0.92794 1.03132 1.03716 1.21514 0.96248 0.92449 0.85395 1.22240 0.99581 0.91138 0.86313 1.92960 1.91074 1.81740 1.50794 1.23654 1.04878 0.92614 0.98336 1.21879 0.75089 0.86605 0.92874 1.93041 1.49266 1.77015 1.97011 1.93018 1.61310 1.84641 1.77843 1.22990 0.96735 0.92969 0.92254 1.48968 1.52647 1.29705 1.05220 1.21917 0.79787 0.85232 0.80742 1.90618 1.37036 1.28138 1.81809 1.19254 0.97429 0.95459 0.90543 1.21162 1.30955 1.13604 0.88934 0.90567 1.24997 0.95084 0.94929 0.99533 1.69951 1.35394 1.20892 1.27791 0.86418 0.79334 0.78516 0.82764 1.20593 1.21272 1.19641 0.91694 0.92012 0.89601 0.90703 0.91129 0.87456 0.87335 0.87500 0.88532 0.93507 0.93541 0.92872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.26 8.26 37.16 0.31 -1.95 16 2 C 0.13 1.77 0.80 -130.83 -0.10 1.67 16 3 C 0.06 0.84 6.45 37.16 0.24 1.08 16 4 F -0.18 -3.52 13.59 2.25 0.03 -3.49 16 5 C -0.16 -1.55 5.64 -24.89 -0.14 -1.69 16 6 C 0.27 3.33 2.64 -24.58 -0.06 3.26 16 7 F -0.18 -2.56 16.76 2.25 0.04 -2.52 16 8 F -0.19 -2.24 17.24 2.25 0.04 -2.20 16 9 C 0.08 1.06 6.31 -2.53 -0.02 1.05 16 10 N -0.63 -10.72 2.82 -155.80 -0.44 -11.16 16 11 C 0.53 11.94 7.31 -10.98 -0.08 11.86 16 12 O -0.50 -12.76 11.41 5.56 0.06 -12.70 16 13 C 0.01 0.31 4.47 -29.03 -0.13 0.18 16 14 C -0.51 -14.68 8.92 -34.44 -0.31 -14.98 16 15 H 0.08 2.30 6.75 -52.49 -0.35 1.95 16 16 C 0.06 1.58 5.46 -17.82 -0.10 1.49 16 17 N -0.90 -26.26 13.29 55.43 0.74 -25.53 16 18 Si 0.90 22.19 29.54 -169.99 -5.02 17.16 16 19 H -0.28 -6.78 7.11 56.52 0.40 -6.38 16 20 H -0.29 -6.90 7.11 56.52 0.40 -6.49 16 21 H -0.27 -6.69 7.11 56.52 0.40 -6.29 16 22 H 0.06 0.93 7.66 -51.93 -0.40 0.53 16 23 H 0.06 0.67 8.14 -51.93 -0.42 0.25 16 24 H 0.09 1.53 6.44 -51.93 -0.33 1.19 16 25 H 0.07 0.72 8.14 -51.93 -0.42 0.30 16 26 H 0.07 0.83 8.13 -51.93 -0.42 0.41 16 27 H 0.11 0.87 7.83 -51.93 -0.41 0.46 16 28 H 0.11 0.81 7.84 -51.93 -0.41 0.40 16 29 H 0.11 1.59 7.48 -51.93 -0.39 1.20 16 30 H 0.10 1.18 8.14 -51.93 -0.42 0.75 16 31 H 0.05 1.20 7.85 -51.93 -0.41 0.79 16 32 H 0.05 1.18 8.14 -51.93 -0.42 0.76 16 33 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 LS Contribution 283.07 15.07 4.27 4.27 Total: -1.00 -32.87 283.07 -4.62 -37.49 By element: Atomic # 1 Polarization: 0.66 SS G_CDS: -3.94 Total: -3.28 kcal Atomic # 6 Polarization: 2.35 SS G_CDS: -0.39 Total: 1.96 kcal Atomic # 7 Polarization: -36.99 SS G_CDS: 0.30 Total: -36.69 kcal Atomic # 8 Polarization: -12.76 SS G_CDS: 0.06 Total: -12.70 kcal Atomic # 9 Polarization: -8.32 SS G_CDS: 0.11 Total: -8.21 kcal Atomic # 14 Polarization: 22.19 SS G_CDS: -5.02 Total: 17.16 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -32.87 -4.62 -37.49 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001143194418.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.703 kcal (2) G-P(sol) polarization free energy of solvation -32.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -179.572 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.625 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.493 kcal (6) G-S(sol) free energy of system = (1) + (5) -184.197 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds