Wall clock time and date at job start Mon Mar 30 2020 01:02:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 O 1.21293 * 119.99987 * 2 1 4 4 N 1.34778 * 120.00290 * 180.02562 * 2 1 3 5 5 C 1.40057 * 120.00239 * 184.60746 * 4 2 1 6 6 C 1.39052 * 119.95874 * 324.87318 * 5 4 2 7 7 C 1.38135 * 120.28186 * 179.97438 * 6 5 4 8 8 C 1.38310 * 120.19927 * 0.03969 * 7 6 5 9 9 F 1.35101 * 120.04390 * 180.25226 * 8 7 6 10 10 C 1.39888 * 119.91819 * 359.97438 * 8 7 6 11 11 C 1.47590 * 120.14397 * 180.02562 * 10 8 7 12 12 O 1.21605 * 119.99615 * 359.97438 * 11 10 8 13 13 N 1.34771 * 120.00299 * 180.02562 * 11 10 8 14 14 C 1.36895 * 120.00025 * 179.97438 * 13 11 10 15 15 H 1.07997 * 119.99674 * 359.97438 * 14 13 11 16 16 C 1.39032 * 119.99756 * 180.02562 * 14 13 11 17 17 N 1.31371 * 120.00109 * 359.97438 * 16 14 13 18 18 Si 1.86802 * 119.99850 * 180.02562 * 16 14 13 19 19 H 1.48506 * 109.46925 * 359.97438 * 18 16 14 20 20 H 1.48499 * 109.47140 * 119.99584 * 18 16 14 21 21 H 1.48502 * 109.47168 * 239.99804 * 18 16 14 22 22 C 1.38460 * 119.95699 * 144.89726 * 5 4 2 23 23 H 1.09003 * 109.47273 * 239.99647 * 1 2 3 24 24 H 1.09003 * 109.47247 * 359.97438 * 1 2 3 25 25 H 1.08998 * 109.47648 * 119.99909 * 1 2 3 26 26 H 0.97001 * 119.99882 * 4.61270 * 4 2 1 27 27 H 1.07995 * 119.86245 * 0.02562 * 6 5 4 28 28 H 1.07994 * 119.90451 * 180.02562 * 7 6 5 29 29 H 0.97000 * 120.00139 * 359.97438 * 13 11 10 30 30 H 0.97005 * 119.99459 * 180.02562 * 17 16 14 31 31 H 1.08003 * 120.10634 * 0.02562 * 22 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 8 2.1134 1.0504 0.0000 4 7 2.1809 -1.1672 -0.0005 5 6 3.5780 -1.1692 0.0969 6 6 4.3176 -0.1575 -0.5057 7 6 5.6958 -0.1526 -0.4134 8 6 6.3503 -1.1553 0.2790 9 9 7.6981 -1.1446 0.3716 10 6 5.6146 -2.1773 0.8882 11 6 6.3078 -3.2494 1.6287 12 8 7.5211 -3.2457 1.7099 13 7 5.5962 -4.2329 2.2141 14 6 6.2392 -5.2275 2.9005 15 1 7.3168 -5.2243 2.9726 16 6 5.5051 -6.2424 3.5039 17 7 4.1944 -6.2465 3.4158 18 14 6.3825 -7.5993 4.4412 19 1 7.8484 -7.3662 4.3929 20 1 5.9271 -7.5989 5.8546 21 1 6.0698 -8.9117 3.8206 22 6 4.2212 -2.1788 0.7927 23 1 -0.3634 -0.5139 0.8900 24 1 -0.3634 1.0277 0.0005 25 1 -0.3634 -0.5138 -0.8899 26 1 1.6983 -2.0058 -0.0685 27 1 3.8123 0.6282 -1.0475 28 1 6.2642 0.6363 -0.8834 29 1 4.6284 -4.2360 2.1491 30 1 3.6823 -6.9545 3.8372 31 1 3.6472 -2.9652 1.2602 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000343023855.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:02:47 Heat of formation + Delta-G solvation = -91.067458 kcal Electronic energy + Delta-G solvation = -19364.888805 eV Core-core repulsion = 15946.828312 eV Total energy + Delta-G solvation = -3418.060493 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 266.085 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.21260 -40.47594 -38.76045 -37.35194 -34.63098 -34.08653 -31.76222 -30.75822 -30.60198 -28.13812 -25.43306 -23.53120 -22.30186 -21.06850 -19.53305 -18.41028 -17.39231 -17.16959 -17.03271 -15.97308 -15.48122 -15.14602 -15.04274 -14.65330 -14.14872 -13.90696 -13.85563 -13.40153 -13.12702 -12.90216 -12.82838 -12.43399 -12.36210 -11.97578 -11.70204 -11.22131 -11.11877 -10.43154 -10.36036 -10.20435 -9.94818 -9.69160 -8.78552 -8.53577 -8.14730 -7.87360 -6.63458 -3.94975 1.15818 1.31884 2.42475 2.96210 3.08906 3.18721 3.26575 3.53927 4.03327 4.32521 4.53154 4.61327 4.78254 4.94124 5.01547 5.09521 5.21059 5.21924 5.47542 5.51302 5.66583 5.81401 6.12509 6.32141 6.38840 6.48310 6.53351 7.12447 7.28274 7.37250 7.88598 7.97411 8.43089 8.99686 9.33363 9.90117 10.53609 Molecular weight = 266.09amu Principal moments of inertia in cm(-1) A = 0.019922 B = 0.005449 C = 0.004325 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1405.140360 B = 5137.589662 C = 6472.656886 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.510 3.490 3 O -0.531 6.531 4 N -0.670 5.670 5 C 0.121 3.879 6 C -0.092 4.092 7 C -0.148 4.148 8 C 0.129 3.871 9 F -0.118 7.118 10 C -0.114 4.114 11 C 0.465 3.535 12 O -0.582 6.582 13 N -0.541 5.541 14 C -0.291 4.291 15 H 0.110 0.890 16 C 0.023 3.977 17 N -0.890 5.890 18 Si 0.935 3.065 19 H -0.265 1.265 20 H -0.279 1.279 21 H -0.279 1.279 22 C -0.100 4.100 23 H 0.092 0.908 24 H 0.094 0.906 25 H 0.090 0.910 26 H 0.413 0.587 27 H 0.145 0.855 28 H 0.138 0.862 29 H 0.392 0.608 30 H 0.275 0.725 31 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.192 7.913 -7.330 14.839 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.298 3.702 3 O -0.407 6.407 4 N -0.316 5.316 5 C 0.027 3.973 6 C -0.112 4.112 7 C -0.167 4.167 8 C 0.107 3.893 9 F -0.096 7.096 10 C -0.119 4.119 11 C 0.253 3.747 12 O -0.467 6.467 13 N -0.176 5.176 14 C -0.420 4.420 15 H 0.128 0.872 16 C -0.180 4.180 17 N -0.530 5.530 18 Si 0.761 3.239 19 H -0.189 1.189 20 H -0.205 1.205 21 H -0.205 1.205 22 C -0.122 4.122 23 H 0.111 0.889 24 H 0.113 0.887 25 H 0.109 0.891 26 H 0.250 0.750 27 H 0.162 0.838 28 H 0.156 0.844 29 H 0.227 0.773 30 H 0.085 0.915 31 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -9.104 8.504 -7.146 14.362 hybrid contribution -0.395 -1.192 0.478 1.344 sum -9.499 7.312 -6.668 13.717 Atomic orbital electron populations 1.21922 0.90769 1.05845 1.04687 1.20993 0.90868 0.83150 0.75184 1.90723 1.70509 1.31341 1.48101 1.43542 1.05090 1.10020 1.72940 1.17550 0.82543 0.97645 0.99545 1.21054 0.92491 0.98778 0.98920 1.20946 0.94674 0.99014 1.02081 1.17688 0.77717 0.95219 0.98663 1.91555 1.28122 1.95958 1.93998 1.20273 0.93026 0.97311 1.01290 1.17452 0.87411 0.84047 0.85827 1.90677 1.12942 1.77839 1.65289 1.41867 1.09402 1.21351 1.44955 1.19928 0.94345 1.00806 1.26965 0.87238 1.25384 0.95547 0.99131 0.97924 1.69590 1.05252 1.34428 1.43759 0.85703 0.79790 0.79634 0.78738 1.18895 1.20482 1.20484 1.21027 0.93245 0.99441 0.98467 0.88903 0.88684 0.89092 0.75047 0.83776 0.84413 0.77282 0.91463 0.84331 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.07 10.32 36.00 0.37 -0.70 16 2 C 0.51 5.66 7.78 -10.99 -0.09 5.58 16 3 O -0.53 -8.07 14.52 5.55 0.08 -7.98 16 4 N -0.67 -7.35 5.34 -9.89 -0.05 -7.40 16 5 C 0.12 1.77 6.29 -83.72 -0.53 1.24 16 6 C -0.09 -1.37 8.69 -39.32 -0.34 -1.72 16 7 C -0.15 -2.32 10.01 -39.59 -0.40 -2.72 16 8 C 0.13 2.51 7.28 -38.94 -0.28 2.22 16 9 F -0.12 -2.56 15.54 2.25 0.03 -2.52 16 10 C -0.11 -2.34 5.88 -104.93 -0.62 -2.95 16 11 C 0.46 11.75 7.72 -12.45 -0.10 11.65 16 12 O -0.58 -16.82 14.90 5.27 0.08 -16.74 16 13 N -0.54 -13.75 5.23 -11.91 -0.06 -13.82 16 14 C -0.29 -7.97 9.68 -15.00 -0.15 -8.11 16 15 H 0.11 3.16 7.15 -52.49 -0.38 2.78 16 16 C 0.02 0.60 5.50 -17.45 -0.10 0.51 16 17 N -0.89 -22.94 13.05 55.50 0.72 -22.22 16 18 Si 0.94 20.24 29.55 -169.99 -5.02 15.22 16 19 H -0.26 -5.78 7.11 56.52 0.40 -5.38 16 20 H -0.28 -5.94 7.11 56.52 0.40 -5.53 16 21 H -0.28 -5.92 7.11 56.52 0.40 -5.51 16 22 C -0.10 -1.68 9.45 -38.97 -0.37 -2.05 16 23 H 0.09 0.45 8.14 -51.93 -0.42 0.03 16 24 H 0.09 0.59 8.12 -51.93 -0.42 0.17 16 25 H 0.09 0.37 8.14 -51.93 -0.42 -0.06 16 26 H 0.41 3.19 8.82 -40.82 -0.36 2.83 16 27 H 0.14 2.07 6.21 -52.49 -0.33 1.74 16 28 H 0.14 1.79 8.06 -52.49 -0.42 1.36 16 29 H 0.39 9.23 5.92 -40.82 -0.24 8.99 16 30 H 0.28 6.64 8.31 -40.82 -0.34 6.30 16 31 H 0.14 2.18 6.40 -52.48 -0.34 1.84 16 LS Contribution 283.33 15.07 4.27 4.27 Total: -1.00 -33.69 283.33 -5.00 -38.69 By element: Atomic # 1 Polarization: 12.02 SS G_CDS: -2.46 Total: 9.56 kcal Atomic # 6 Polarization: 5.54 SS G_CDS: -2.58 Total: 2.95 kcal Atomic # 7 Polarization: -44.05 SS G_CDS: 0.61 Total: -43.44 kcal Atomic # 8 Polarization: -24.88 SS G_CDS: 0.16 Total: -24.73 kcal Atomic # 9 Polarization: -2.56 SS G_CDS: 0.03 Total: -2.52 kcal Atomic # 14 Polarization: 20.24 SS G_CDS: -5.02 Total: 15.22 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -33.69 -5.00 -38.69 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000343023855.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.377 kcal (2) G-P(sol) polarization free energy of solvation -33.691 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.999 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.067 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds