Wall clock time and date at job start Mon Mar 30 2020 01:03:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 O 1.21296 * 119.99979 * 2 1 4 4 N 1.34777 * 120.00258 * 180.02562 * 2 1 3 5 5 C 1.39992 * 120.00284 * 184.40886 * 4 2 1 6 6 C 1.39014 * 120.00096 * 323.92836 * 5 4 2 7 7 C 1.38204 * 120.11601 * 180.02562 * 6 5 4 8 8 C 1.38297 * 120.12632 * 0.02562 * 7 6 5 9 9 F 1.35099 * 119.99637 * 180.27453 * 8 7 6 10 10 C 1.39308 * 120.00809 * 0.02562 * 8 7 6 11 11 N 1.39558 * 120.05755 * 180.02562 * 10 8 7 12 12 C 1.34776 * 119.99813 * 150.62205 * 11 10 8 13 13 O 1.21757 * 120.00284 * 4.81835 * 12 11 10 14 14 C 1.46121 * 119.99788 * 184.82526 * 12 11 10 15 15 H 1.08003 * 119.99788 * 5.74556 * 14 12 11 16 16 C 1.40130 * 119.99881 * 185.74663 * 14 12 11 17 17 N 1.30629 * 119.99823 * 354.18255 * 16 14 12 18 18 Si 1.86797 * 119.99604 * 174.17934 * 16 14 12 19 19 H 1.48502 * 109.46795 * 94.99226 * 18 16 14 20 20 H 1.48507 * 109.46877 * 214.98527 * 18 16 14 21 21 H 1.48498 * 109.47498 * 334.98803 * 18 16 14 22 22 C 1.38663 * 120.01011 * 143.95214 * 5 4 2 23 23 H 1.09001 * 109.47002 * 240.00021 * 1 2 3 24 24 H 1.08999 * 109.47355 * 0.02562 * 1 2 3 25 25 H 1.09003 * 109.47448 * 119.99907 * 1 2 3 26 26 H 0.96999 * 119.99946 * 4.39643 * 4 2 1 27 27 H 1.08003 * 119.94120 * 0.02562 * 6 5 4 28 28 H 1.07993 * 119.93623 * 180.02562 * 7 6 5 29 29 H 0.96995 * 119.99672 * 330.61411 * 11 10 8 30 30 H 0.97001 * 120.00008 * 180.02562 * 17 16 14 31 31 H 1.08007 * 120.05642 * 0.02562 * 22 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 8 2.1135 1.0505 0.0000 4 7 2.1809 -1.1672 -0.0005 5 6 3.5777 -1.1690 0.0927 6 6 4.3172 -0.1700 -0.5299 7 6 5.6963 -0.1698 -0.4399 8 6 6.3458 -1.1637 0.2694 9 9 7.6937 -1.1578 0.3603 10 6 5.6099 -2.1679 0.8945 11 7 6.2642 -3.1710 1.6109 12 6 5.6519 -3.7608 2.6568 13 8 4.4970 -3.4818 2.9226 14 6 6.3743 -4.7352 3.4716 15 1 7.4246 -4.9143 3.2947 16 6 5.7044 -5.4371 4.4826 17 7 4.4657 -5.1406 4.7729 18 14 6.5826 -6.7966 5.4151 19 1 7.1580 -6.2455 6.6683 20 1 5.6157 -7.8741 5.7464 21 1 7.6721 -7.3512 4.5721 22 6 4.2239 -2.1675 0.8056 23 1 -0.3633 -0.5138 0.8900 24 1 -0.3634 1.0276 -0.0005 25 1 -0.3634 -0.5138 -0.8900 26 1 1.6981 -2.0060 -0.0653 27 1 3.8131 0.6073 -1.0850 28 1 6.2679 0.6079 -0.9244 29 1 7.1595 -3.4437 1.3562 30 1 4.0020 -5.6262 5.4730 31 1 3.6505 -2.9446 1.2891 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000355420486.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:03:00 Heat of formation + Delta-G solvation = -92.335409 kcal Electronic energy + Delta-G solvation = -19493.301948 eV Core-core repulsion = 16075.186473 eV Total energy + Delta-G solvation = -3418.115475 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 266.085 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.30125 -40.23451 -38.72271 -36.96000 -34.55979 -33.34937 -32.51357 -30.50889 -29.44508 -27.82170 -26.28530 -22.90922 -22.27097 -20.77712 -19.60943 -18.15640 -17.15288 -16.96709 -16.81052 -15.78185 -15.52656 -15.33969 -15.02925 -14.60203 -14.10224 -13.80849 -13.30754 -13.23745 -12.88246 -12.72428 -12.54885 -12.27625 -12.20847 -11.76435 -11.43169 -11.17973 -11.05962 -10.73243 -10.39830 -10.04373 -9.79670 -9.33738 -8.97718 -7.95272 -7.72156 -7.14325 -6.44219 -4.90496 1.53024 1.84977 2.65879 3.02490 3.10420 3.14198 3.22347 3.92144 4.05807 4.34494 4.50360 4.73977 4.83139 5.13642 5.23491 5.27467 5.51164 5.65712 5.68061 5.85713 5.92265 6.15294 6.60362 6.64711 6.71255 6.93294 7.20158 7.26081 7.56068 7.60913 7.90558 8.05533 8.21540 8.76665 9.08238 10.25687 10.45966 Molecular weight = 266.09amu Principal moments of inertia in cm(-1) A = 0.021540 B = 0.005474 C = 0.004452 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1299.585055 B = 5113.845406 C = 6288.432301 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C 0.509 3.491 3 O -0.532 6.532 4 N -0.667 5.667 5 C 0.146 3.854 6 C -0.138 4.138 7 C -0.118 4.118 8 C 0.021 3.979 9 F -0.146 7.146 10 C 0.180 3.820 11 N -0.690 5.690 12 C 0.543 3.457 13 O -0.559 6.559 14 C -0.535 4.535 15 H 0.074 0.926 16 C 0.087 3.913 17 N -0.758 5.758 18 Si 0.914 3.086 19 H -0.271 1.271 20 H -0.277 1.277 21 H -0.262 1.262 22 C -0.139 4.139 23 H 0.092 0.908 24 H 0.093 0.907 25 H 0.089 0.911 26 H 0.412 0.588 27 H 0.137 0.863 28 H 0.131 0.869 29 H 0.398 0.602 30 H 0.273 0.727 31 H 0.167 0.833 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.354 3.963 -9.399 11.090 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.297 3.703 3 O -0.408 6.408 4 N -0.312 5.312 5 C 0.051 3.949 6 C -0.160 4.160 7 C -0.138 4.138 8 C -0.002 4.002 9 F -0.125 7.125 10 C 0.078 3.922 11 N -0.332 5.332 12 C 0.351 3.649 13 O -0.441 6.441 14 C -0.571 4.571 15 H 0.092 0.908 16 C -0.134 4.134 17 N -0.386 5.386 18 Si 0.738 3.262 19 H -0.196 1.196 20 H -0.202 1.202 21 H -0.186 1.186 22 C -0.162 4.162 23 H 0.110 0.890 24 H 0.112 0.888 25 H 0.107 0.893 26 H 0.247 0.753 27 H 0.154 0.846 28 H 0.149 0.851 29 H 0.232 0.768 30 H 0.084 0.916 31 H 0.184 0.816 Dipole moment (debyes) X Y Z Total from point charges -4.907 4.805 -8.965 11.293 hybrid contribution 0.924 -1.170 0.435 1.553 sum -3.983 3.636 -8.530 10.091 Atomic orbital electron populations 1.21914 0.91045 1.05653 1.04569 1.20939 0.90755 0.83251 0.75305 1.90717 1.70539 1.31320 1.48256 1.43485 1.05340 1.09784 1.72612 1.17633 0.82342 0.97347 0.97538 1.20812 0.92418 1.00279 1.02475 1.20654 0.94557 0.97935 1.00611 1.17552 0.76863 0.98088 1.07683 1.91408 1.29261 1.96430 1.95403 1.17715 0.91771 0.89525 0.93187 1.44059 1.19748 1.37325 1.32115 1.18406 0.86801 0.81278 0.78464 1.90552 1.17873 1.64724 1.70992 1.20845 0.97228 1.22236 1.16783 0.90766 1.25745 0.94608 0.97096 0.95981 1.69977 1.10094 1.34402 1.24086 0.86241 0.79825 0.80231 0.79905 1.19589 1.20171 1.18606 1.21394 0.93275 1.02187 0.99382 0.88951 0.88813 0.89263 0.75271 0.84554 0.85113 0.76812 0.91645 0.81613 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.46 10.32 36.00 0.37 -1.09 16 2 C 0.51 7.04 7.78 -10.99 -0.09 6.96 16 3 O -0.53 -9.46 14.59 5.54 0.08 -9.38 16 4 N -0.67 -9.46 5.33 -9.86 -0.05 -9.51 16 5 C 0.15 2.59 6.28 -83.69 -0.53 2.07 16 6 C -0.14 -2.38 8.69 -39.31 -0.34 -2.72 16 7 C -0.12 -1.99 10.01 -39.57 -0.40 -2.38 16 8 C 0.02 0.41 7.31 -39.16 -0.29 0.12 16 9 F -0.15 -2.73 16.87 2.25 0.04 -2.69 16 10 C 0.18 3.83 6.40 -83.70 -0.54 3.29 16 11 N -0.69 -15.70 5.25 -11.17 -0.06 -15.76 16 12 C 0.54 14.74 7.60 -13.10 -0.10 14.64 16 13 O -0.56 -16.63 12.11 5.14 0.06 -16.57 16 14 C -0.54 -14.35 9.53 -35.71 -0.34 -14.69 16 15 H 0.07 1.82 7.86 -52.48 -0.41 1.41 16 16 C 0.09 2.29 5.50 -17.35 -0.10 2.20 16 17 N -0.76 -21.28 11.85 55.55 0.66 -20.62 16 18 Si 0.91 19.06 29.56 -169.99 -5.03 14.03 16 19 H -0.27 -5.57 7.11 56.52 0.40 -5.17 16 20 H -0.28 -5.63 7.11 56.52 0.40 -5.23 16 21 H -0.26 -5.30 7.11 56.52 0.40 -4.89 16 22 C -0.14 -2.87 8.66 -39.19 -0.34 -3.21 16 23 H 0.09 0.68 8.14 -51.93 -0.42 0.26 16 24 H 0.09 0.77 8.12 -51.93 -0.42 0.34 16 25 H 0.09 0.53 8.14 -51.93 -0.42 0.11 16 26 H 0.41 4.55 8.82 -40.82 -0.36 4.19 16 27 H 0.14 2.27 6.30 -52.48 -0.33 1.94 16 28 H 0.13 1.84 8.06 -52.49 -0.42 1.42 16 29 H 0.40 8.05 8.52 -40.82 -0.35 7.70 16 30 H 0.27 6.92 8.29 -40.82 -0.34 6.58 16 31 H 0.17 3.81 5.76 -52.48 -0.30 3.50 16 LS Contribution 282.98 15.07 4.26 4.26 Total: -1.00 -33.63 282.98 -5.28 -38.91 By element: Atomic # 1 Polarization: 14.74 SS G_CDS: -2.58 Total: 12.16 kcal Atomic # 6 Polarization: 7.84 SS G_CDS: -2.67 Total: 5.17 kcal Atomic # 7 Polarization: -46.44 SS G_CDS: 0.55 Total: -45.89 kcal Atomic # 8 Polarization: -26.09 SS G_CDS: 0.14 Total: -25.95 kcal Atomic # 9 Polarization: -2.73 SS G_CDS: 0.04 Total: -2.69 kcal Atomic # 14 Polarization: 19.06 SS G_CDS: -5.03 Total: 14.03 kcal Total LS contribution 4.26 Total: 4.26 kcal Total: -33.63 -5.28 -38.91 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000355420486.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.425 kcal (2) G-P(sol) polarization free energy of solvation -33.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.051 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.911 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.335 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds