Wall clock time and date at job start Mon Mar 30 2020 00:21:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.37098 * 119.99653 * 2 1 4 4 H 1.07997 * 119.99869 * 201.70059 * 3 2 1 5 5 C 1.38947 * 120.00336 * 21.71348 * 3 2 1 6 6 N 1.31415 * 120.00222 * 11.33567 * 5 3 2 7 7 Si 1.86802 * 120.00133 * 191.33821 * 5 3 2 8 8 H 1.48494 * 109.47007 * 85.07076 * 7 5 3 9 9 H 1.48502 * 109.46828 * 205.06905 * 7 5 3 10 10 H 1.48497 * 109.47072 * 325.06833 * 7 5 3 11 11 C 1.34771 * 119.99822 * 180.02562 * 2 1 3 12 12 O 1.21290 * 119.99704 * 179.97438 * 11 2 1 13 13 C 1.50702 * 119.99904 * 359.97438 * 11 2 1 14 14 C 1.53004 * 109.46753 * 180.02562 * 13 11 2 15 15 C 1.50703 * 109.47112 * 180.02562 * 14 13 11 16 16 C 1.38233 * 119.98641 * 270.29501 * 15 14 13 17 17 C 1.38215 * 120.01494 * 180.25180 * 16 15 14 18 18 C 1.38357 * 119.98135 * 359.46971 * 17 16 15 19 19 Cl 1.73603 * 120.01263 * 180.27353 * 18 17 16 20 20 C 1.38352 * 119.97583 * 0.25605 * 18 17 16 21 21 C 1.38207 * 119.98611 * 359.97438 * 20 18 17 22 22 H 1.09002 * 109.46428 * 272.17293 * 1 2 3 23 23 H 1.08997 * 109.47198 * 32.16539 * 1 2 3 24 24 H 1.08992 * 109.47037 * 152.17360 * 1 2 3 25 25 H 0.96997 * 120.00407 * 180.02562 * 6 5 3 26 26 H 1.08998 * 109.46953 * 60.00955 * 13 11 2 27 27 H 1.08997 * 109.47396 * 299.99940 * 13 11 2 28 28 H 1.08996 * 109.47524 * 59.99695 * 14 13 11 29 29 H 1.09004 * 109.46938 * 299.99772 * 14 13 11 30 30 H 1.08003 * 119.99921 * 0.02562 * 16 15 14 31 31 H 1.07997 * 120.01228 * 179.74812 * 17 16 15 32 32 H 1.08001 * 120.00690 * 180.02562 * 20 18 17 33 33 H 1.07996 * 119.99373 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1505 1.1873 0.0000 4 1 3.1730 1.2205 -0.3458 5 6 1.5297 2.3480 0.4452 6 7 0.3757 2.2778 1.0700 7 14 2.3354 4.0082 0.1555 8 1 1.9736 4.5048 -1.1964 9 1 1.8625 4.9734 1.1803 10 1 3.8104 3.8663 0.2524 11 6 2.1389 -1.1672 -0.0005 12 8 3.3518 -1.1672 -0.0010 13 6 1.3853 -2.4723 -0.0005 14 6 2.3796 -3.6352 -0.0005 15 6 1.6261 -4.9403 -0.0012 16 6 1.2749 -5.5359 1.1958 17 6 0.5884 -6.7355 1.1960 18 6 0.2431 -7.3347 -0.0024 19 17 -0.6254 -8.8378 -0.0032 20 6 0.5899 -6.7352 -1.2001 21 6 1.2806 -5.5381 -1.1989 22 1 -0.3632 0.0390 1.0270 23 1 -0.3633 0.8699 -0.5471 24 1 -0.3633 -0.9088 -0.4797 25 1 -0.0579 3.0880 1.3804 26 1 0.7585 -2.5298 -0.8903 27 1 0.7590 -2.5302 0.8897 28 1 3.0063 -3.5775 0.8894 29 1 3.0062 -3.5774 -0.8906 30 1 1.5402 -5.0657 2.1312 31 1 0.3177 -7.2028 2.1312 32 1 0.3203 -7.2022 -2.1358 33 1 1.5510 -5.0698 -2.1337 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000259702421.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:21:20 Heat of formation + Delta-G solvation = -22.864808 kcal Electronic energy + Delta-G solvation = -17217.895146 eV Core-core repulsion = 14269.242949 eV Total energy + Delta-G solvation = -2948.652197 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 267.077 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -39.55334 -38.38266 -36.63839 -34.79924 -33.43585 -31.59678 -31.13576 -29.30304 -26.34637 -25.02188 -23.46008 -22.90014 -21.00595 -18.67781 -17.19813 -16.85578 -16.08212 -15.76013 -15.12235 -14.64327 -14.41532 -14.12036 -13.59965 -13.58608 -13.39350 -12.86933 -12.60757 -11.91159 -11.77884 -11.58004 -11.36043 -11.31900 -11.09088 -11.02356 -10.93600 -10.82759 -10.55204 -10.35576 -10.20068 -9.11894 -9.02173 -8.66166 -8.31445 -7.68663 -6.30347 -3.86882 1.07978 1.21850 2.01818 3.16852 3.24909 3.30090 3.55556 3.91268 4.14348 4.69943 4.72971 4.79601 5.11077 5.14053 5.26055 5.29120 5.54350 5.59215 5.66721 5.86906 5.88915 6.07472 6.13599 6.21208 6.25466 6.42257 6.51936 6.67401 6.77157 6.90147 7.24175 7.57022 8.13631 8.49400 9.19822 9.44513 9.99836 10.73056 Molecular weight = 267.08amu Principal moments of inertia in cm(-1) A = 0.050594 B = 0.003315 C = 0.003233 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 553.293405 B = 8444.956534 C = 8658.247369 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.113 3.887 2 N -0.448 5.448 3 C -0.306 4.306 4 H 0.099 0.901 5 C 0.029 3.971 6 N -0.885 5.885 7 Si 0.927 3.073 8 H -0.277 1.277 9 H -0.284 1.284 10 H -0.270 1.270 11 C 0.444 3.556 12 O -0.593 6.593 13 C -0.122 4.122 14 C -0.065 4.065 15 C -0.064 4.064 16 C -0.105 4.105 17 C -0.109 4.109 18 C -0.045 4.045 19 Cl -0.082 7.082 20 C -0.109 4.109 21 C -0.106 4.106 22 H 0.057 0.943 23 H 0.069 0.931 24 H 0.026 0.974 25 H 0.267 0.733 26 H 0.076 0.924 27 H 0.078 0.922 28 H 0.080 0.920 29 H 0.080 0.920 30 H 0.133 0.867 31 H 0.131 0.869 32 H 0.130 0.870 33 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.901 -16.168 -1.998 16.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.031 4.031 2 N -0.167 5.167 3 C -0.434 4.434 4 H 0.116 0.884 5 C -0.174 4.174 6 N -0.524 5.524 7 Si 0.754 3.246 8 H -0.203 1.203 9 H -0.210 1.210 10 H -0.194 1.194 11 C 0.232 3.768 12 O -0.479 6.479 13 C -0.162 4.162 14 C -0.103 4.103 15 C -0.064 4.064 16 C -0.123 4.123 17 C -0.127 4.127 18 C -0.072 4.072 19 Cl -0.053 7.053 20 C -0.128 4.128 21 C -0.124 4.124 22 H 0.075 0.925 23 H 0.087 0.913 24 H 0.045 0.955 25 H 0.077 0.923 26 H 0.095 0.905 27 H 0.097 0.903 28 H 0.099 0.901 29 H 0.098 0.902 30 H 0.151 0.849 31 H 0.148 0.852 32 H 0.148 0.852 33 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -3.542 -16.129 -1.910 16.624 hybrid contribution -0.097 0.755 -0.017 0.762 sum -3.639 -15.374 -1.927 15.916 Atomic orbital electron populations 1.21509 0.81116 0.98787 1.01679 1.43620 1.05560 1.04866 1.62624 1.19675 0.99104 0.83829 1.40815 0.88368 1.25337 0.96502 1.00045 0.95490 1.70002 1.16831 1.29140 1.36474 0.85931 0.79608 0.81157 0.77941 1.20340 1.20969 1.19428 1.20051 0.88049 0.84888 0.83801 1.90507 1.14027 1.87238 1.56113 1.21496 0.98486 0.93331 1.02908 1.20373 0.96653 0.88656 1.04581 1.20270 0.96700 0.96625 0.92843 1.21114 0.98074 0.94625 0.98533 1.21034 0.99080 0.95900 0.96735 1.20890 1.01163 0.89750 0.95378 1.98355 1.75514 1.32447 1.98986 1.21023 0.99106 0.95943 0.96725 1.21098 0.98171 0.94700 0.98458 0.92484 0.91252 0.95532 0.92285 0.90509 0.90309 0.90109 0.90187 0.84895 0.85154 0.85180 0.84958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 2.51 8.52 59.85 0.51 3.02 16 2 N -0.45 -11.46 3.02 -122.19 -0.37 -11.83 16 3 C -0.31 -8.57 9.31 -14.93 -0.14 -8.71 16 4 H 0.10 2.87 7.39 -52.49 -0.39 2.48 16 5 C 0.03 0.77 5.12 -17.47 -0.09 0.68 16 6 N -0.88 -23.58 10.56 55.50 0.59 -22.99 16 7 Si 0.93 20.79 29.57 -169.99 -5.03 15.76 16 8 H -0.28 -6.09 7.11 56.52 0.40 -5.69 16 9 H -0.28 -6.27 7.11 56.52 0.40 -5.87 16 10 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 11 C 0.44 10.59 7.63 -10.99 -0.08 10.51 16 12 O -0.59 -16.12 15.67 5.55 0.09 -16.03 16 13 C -0.12 -2.13 4.20 -27.88 -0.12 -2.25 16 14 C -0.06 -1.00 4.63 -27.88 -0.13 -1.13 16 15 C -0.06 -0.83 5.13 -104.62 -0.54 -1.36 16 16 C -0.11 -1.25 9.70 -39.59 -0.38 -1.63 16 17 C -0.11 -1.20 9.83 -39.55 -0.39 -1.58 16 18 C -0.05 -0.51 6.32 -39.50 -0.25 -0.76 16 19 Cl -0.08 -0.84 28.96 -51.86 -1.50 -2.34 16 20 C -0.11 -1.19 9.83 -39.55 -0.39 -1.58 16 21 C -0.11 -1.23 9.70 -39.59 -0.38 -1.62 16 22 H 0.06 1.32 7.56 -51.93 -0.39 0.92 16 23 H 0.07 1.63 7.00 -51.93 -0.36 1.27 16 24 H 0.03 0.48 6.36 -51.93 -0.33 0.15 16 25 H 0.27 6.74 8.31 -40.82 -0.34 6.41 16 26 H 0.08 1.22 7.40 -51.93 -0.38 0.84 16 27 H 0.08 1.31 8.11 -51.93 -0.42 0.88 16 28 H 0.08 1.31 8.05 -51.93 -0.42 0.89 16 29 H 0.08 1.27 8.04 -51.93 -0.42 0.85 16 30 H 0.13 1.42 8.06 -52.48 -0.42 1.00 16 31 H 0.13 1.20 8.06 -52.49 -0.42 0.77 16 32 H 0.13 1.17 8.06 -52.49 -0.42 0.75 16 33 H 0.13 1.36 8.06 -52.49 -0.42 0.94 16 LS Contribution 299.47 15.07 4.51 4.51 Total: -1.00 -30.38 299.47 -8.03 -38.41 By element: Atomic # 1 Polarization: 4.85 SS G_CDS: -3.94 Total: 0.91 kcal Atomic # 6 Polarization: -4.02 SS G_CDS: -2.38 Total: -6.40 kcal Atomic # 7 Polarization: -35.04 SS G_CDS: 0.22 Total: -34.82 kcal Atomic # 8 Polarization: -16.12 SS G_CDS: 0.09 Total: -16.03 kcal Atomic # 14 Polarization: 20.79 SS G_CDS: -5.03 Total: 15.76 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -1.50 Total: -2.34 kcal Total LS contribution 4.51 Total: 4.51 kcal Total: -30.38 -8.03 -38.41 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000259702421.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.545 kcal (2) G-P(sol) polarization free energy of solvation -30.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.033 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.409 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.865 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds