Wall clock time and date at job start Mon Mar 30 2020 00:52:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28723 * 125.31922 * 2 1 4 4 N 1.28978 * 108.98661 * 179.97438 * 3 2 1 5 5 C 1.34186 * 107.25470 * 359.97438 * 4 3 2 6 6 C 1.48004 * 126.69669 * 179.97438 * 5 4 3 7 7 O 1.21542 * 119.99960 * 180.02562 * 6 5 4 8 8 N 1.34770 * 120.00539 * 0.02812 * 6 5 4 9 9 C 1.47433 * 125.64428 * 359.95740 * 8 6 5 10 10 C 1.55393 * 104.87396 * 204.16622 * 9 8 6 11 11 C 1.55158 * 101.36604 * 323.02138 * 10 9 8 12 12 O 1.42905 * 110.71665 * 277.04214 * 11 10 9 13 13 C 1.50698 * 110.72071 * 153.94900 * 11 10 9 14 14 H 1.08000 * 120.00108 * 2.43313 * 13 11 10 15 15 C 1.37875 * 119.99880 * 182.43864 * 13 11 10 16 16 N 1.31516 * 120.00122 * 359.97438 * 15 13 11 17 17 Si 1.86797 * 120.00107 * 179.97438 * 15 13 11 18 18 H 1.48501 * 109.47033 * 59.99945 * 17 15 13 19 19 H 1.48501 * 109.47466 * 180.02562 * 17 15 13 20 20 H 1.48507 * 109.47176 * 300.00326 * 17 15 13 21 21 C 1.47023 * 125.65372 * 179.97438 * 8 6 5 22 22 N 1.28867 * 125.32035 * 180.30674 * 2 1 3 23 23 H 1.09003 * 109.46828 * 89.98372 * 1 2 3 24 24 H 1.09004 * 109.47330 * 209.97558 * 1 2 3 25 25 H 1.08997 * 109.47350 * 329.98122 * 1 2 3 26 26 H 1.08994 * 110.36621 * 323.00423 * 9 8 6 27 27 H 1.09005 * 110.36538 * 85.21633 * 9 8 6 28 28 H 1.09003 * 111.18887 * 204.98028 * 10 9 8 29 29 H 1.08998 * 111.02037 * 80.98017 * 10 9 8 30 30 H 0.96696 * 114.00036 * 177.55969 * 12 11 10 31 31 H 0.97000 * 119.99972 * 179.97438 * 16 15 13 32 32 H 1.09001 * 109.87979 * 59.49193 * 21 8 6 33 33 H 1.08999 * 110.00722 * 298.39314 * 21 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2092 1.0503 0.0000 4 7 3.4469 0.6876 0.0005 5 6 3.4685 -0.6541 0.0015 6 6 4.6693 -1.5193 0.0018 7 8 4.5470 -2.7286 0.0022 8 7 5.8984 -0.9664 0.0018 9 6 6.1904 0.4787 0.0005 10 6 7.6127 0.5977 -0.6139 11 6 8.3058 -0.6600 -0.0263 12 8 8.7878 -0.4012 1.2939 13 6 9.4285 -1.1174 -0.9215 14 1 9.6732 -0.5555 -1.8108 15 6 10.1432 -2.2532 -0.6054 16 7 9.8455 -2.9373 0.4777 17 14 11.5344 -2.8206 -1.7154 18 1 12.5679 -1.7573 -1.7965 19 1 12.1387 -4.0576 -1.1588 20 1 11.0021 -3.0981 -3.0737 21 6 7.1700 -1.7044 0.0026 22 7 2.2100 -1.0515 -0.0056 23 1 -0.3633 0.0003 -1.0277 24 1 -0.3634 -0.8902 0.5135 25 1 -0.3634 0.8898 0.5141 26 1 5.4658 1.0115 -0.6152 27 1 6.1816 0.8684 1.0184 28 1 8.1103 1.5090 -0.2821 29 1 7.5738 0.5497 -1.7022 30 1 9.1965 -1.1667 1.7205 31 1 10.3482 -3.7366 0.7000 32 1 7.2296 -2.3411 -0.8801 33 1 7.2479 -2.3121 0.9041 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001469405620.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:52:58 Heat of formation + Delta-G solvation = 60.704807 kcal Electronic energy + Delta-G solvation = -20478.453844 eV Core-core repulsion = 17157.301835 eV Total energy + Delta-G solvation = -3321.152009 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 267.112 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -44.39843 -39.37499 -37.24772 -35.32359 -34.28069 -33.14682 -32.19188 -30.27659 -29.04330 -27.74331 -25.88900 -24.38995 -22.96688 -22.49324 -19.92434 -19.49649 -17.69115 -17.65670 -17.15208 -16.53106 -15.61184 -15.16027 -14.89051 -14.33526 -14.07786 -13.79414 -13.59612 -13.11430 -12.96578 -12.86123 -12.28839 -12.10136 -11.66834 -11.48098 -11.18963 -11.12934 -10.99997 -10.70783 -10.54770 -10.50797 -10.37493 -10.12896 -9.84605 -9.30822 -8.66592 -8.33199 -7.98947 -6.28580 -4.37181 0.98949 1.56595 1.69818 3.08873 3.24509 3.29573 3.31755 3.43452 4.04052 4.16536 4.29067 4.52838 4.75798 4.82812 4.99385 5.23566 5.49183 5.53379 5.85220 5.88936 5.92327 6.11876 6.32621 6.53245 6.79118 6.85047 6.88297 7.23427 7.34797 7.73451 7.94613 8.03865 8.12511 8.48041 8.66440 9.31036 9.41246 10.79285 Molecular weight = 267.11amu Principal moments of inertia in cm(-1) A = 0.041327 B = 0.004717 C = 0.004505 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 677.363285 B = 5934.562349 C = 6213.545658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.094 3.906 2 N -0.141 5.141 3 N -0.064 5.064 4 N -0.249 5.249 5 C 0.146 3.854 6 C 0.613 3.387 7 O -0.522 6.522 8 N -0.585 5.585 9 C 0.098 3.902 10 C -0.117 4.117 11 C 0.248 3.752 12 O -0.583 6.583 13 C -0.538 4.538 14 H 0.068 0.932 15 C 0.071 3.929 16 N -0.896 5.896 17 Si 0.905 3.095 18 H -0.274 1.274 19 H -0.285 1.285 20 H -0.275 1.275 21 C 0.104 3.896 22 N -0.254 5.254 23 H 0.103 0.897 24 H 0.112 0.888 25 H 0.114 0.886 26 H 0.083 0.917 27 H 0.069 0.931 28 H 0.079 0.921 29 H 0.077 0.923 30 H 0.384 0.616 31 H 0.271 0.729 32 H 0.073 0.927 33 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.351 6.392 -0.685 16.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.054 5.054 3 N -0.058 5.058 4 N -0.124 5.124 5 C -0.138 4.138 6 C 0.394 3.606 7 O -0.396 6.396 8 N -0.317 5.317 9 C -0.025 4.025 10 C -0.155 4.155 11 C 0.208 3.792 12 O -0.393 6.393 13 C -0.576 4.576 14 H 0.086 0.914 15 C -0.132 4.132 16 N -0.535 5.535 17 Si 0.732 3.268 18 H -0.200 1.200 19 H -0.211 1.211 20 H -0.200 1.200 21 C -0.017 4.017 22 N -0.108 5.108 23 H 0.122 0.878 24 H 0.131 0.869 25 H 0.132 0.868 26 H 0.101 0.899 27 H 0.088 0.912 28 H 0.098 0.902 29 H 0.096 0.904 30 H 0.235 0.765 31 H 0.082 0.918 32 H 0.091 0.909 33 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -16.027 6.645 -0.704 17.364 hybrid contribution 0.952 -1.383 -0.408 1.728 sum -15.075 5.262 -1.112 16.006 Atomic orbital electron populations 1.22481 0.68858 1.07011 1.06200 1.50229 1.10963 1.00877 1.43283 1.78913 0.96766 1.14244 1.15879 1.76260 1.09281 1.10428 1.16383 1.25545 0.93141 0.90154 1.04964 1.15761 0.79884 0.85369 0.79594 1.90826 1.85004 1.12656 1.51094 1.48551 1.04986 1.09720 1.68439 1.22681 0.97989 0.80250 1.01540 1.22863 0.92954 0.99884 0.99840 1.19506 0.89370 0.88271 0.82077 1.86110 1.80262 1.42230 1.30667 1.21490 1.16177 1.10289 1.09662 0.91413 1.25076 0.97206 0.95673 0.95281 1.69628 1.41023 1.17978 1.24836 0.86442 0.81720 0.78022 0.80619 1.19965 1.21083 1.20016 1.23234 0.79567 0.96417 1.02495 1.75096 1.02590 1.14134 1.18991 0.87850 0.86933 0.86752 0.89932 0.91230 0.90194 0.90442 0.76508 0.91847 0.90916 0.91035 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.47 11.62 59.85 0.70 1.16 16 2 N -0.14 -1.71 4.39 -16.65 -0.07 -1.79 16 3 N -0.06 -0.91 13.23 60.35 0.80 -0.11 16 4 N -0.25 -4.19 9.68 32.10 0.31 -3.88 16 5 C 0.15 2.68 7.95 -156.24 -1.24 1.44 16 6 C 0.61 13.12 7.86 -12.26 -0.10 13.03 16 7 O -0.52 -12.60 17.43 5.33 0.09 -12.50 16 8 N -0.58 -12.55 3.33 -171.26 -0.57 -13.12 16 9 C 0.10 1.86 6.16 -2.26 -0.01 1.85 16 10 C -0.12 -2.38 6.26 -24.32 -0.15 -2.53 16 11 C 0.25 5.98 0.85 -89.94 -0.08 5.91 16 12 O -0.58 -14.61 13.07 -35.23 -0.46 -15.07 16 13 C -0.54 -13.93 8.11 -34.44 -0.28 -14.21 16 14 H 0.07 1.72 7.77 -52.49 -0.41 1.31 16 15 C 0.07 1.83 5.27 -17.82 -0.09 1.74 16 16 N -0.90 -23.60 10.96 55.43 0.61 -22.99 16 17 Si 0.90 20.31 29.54 -169.99 -5.02 15.29 16 18 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 19 H -0.29 -6.38 7.11 56.52 0.40 -5.98 16 20 H -0.27 -6.15 7.11 56.52 0.40 -5.75 16 21 C 0.10 2.50 5.38 -3.06 -0.02 2.48 16 22 N -0.25 -4.11 12.17 32.11 0.39 -3.72 16 23 H 0.10 0.31 8.14 -51.93 -0.42 -0.12 16 24 H 0.11 0.39 8.14 -51.93 -0.42 -0.03 16 25 H 0.11 0.28 8.14 -51.93 -0.42 -0.14 16 26 H 0.08 1.43 6.19 -51.93 -0.32 1.11 16 27 H 0.07 1.31 8.14 -51.93 -0.42 0.89 16 28 H 0.08 1.53 8.14 -51.93 -0.42 1.10 16 29 H 0.08 1.50 8.04 -51.93 -0.42 1.08 16 30 H 0.38 9.83 7.23 45.56 0.33 10.16 16 31 H 0.27 6.89 8.31 -40.82 -0.34 6.55 16 32 H 0.07 1.87 7.81 -51.93 -0.41 1.47 16 33 H 0.07 1.85 8.00 -51.93 -0.42 1.44 16 LS Contribution 288.64 15.07 4.35 4.35 Total: -1.00 -31.56 288.64 -3.74 -35.30 By element: Atomic # 1 Polarization: 10.25 SS G_CDS: -2.89 Total: 7.37 kcal Atomic # 6 Polarization: 12.14 SS G_CDS: -1.28 Total: 10.87 kcal Atomic # 7 Polarization: -47.06 SS G_CDS: 1.46 Total: -45.59 kcal Atomic # 8 Polarization: -27.21 SS G_CDS: -0.37 Total: -27.57 kcal Atomic # 14 Polarization: 20.31 SS G_CDS: -5.02 Total: 15.29 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -31.56 -3.74 -35.30 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001469405620.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 96.004 kcal (2) G-P(sol) polarization free energy of solvation -31.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.737 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.299 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.705 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds