Wall clock time and date at job start Mon Mar 30 2020 00:53:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 N 1.28721 * 125.31836 * 2 1 4 4 N 1.28984 * 108.98622 * 179.79446 * 3 2 1 5 5 C 1.34192 * 107.25286 * 0.37592 * 4 3 2 6 6 C 1.47998 * 126.69732 * 179.89133 * 5 4 3 7 7 O 1.21540 * 119.99744 * 179.69042 * 6 5 4 8 8 N 1.34770 * 120.00167 * 359.68716 * 6 5 4 9 9 C 1.47422 * 125.65124 * 359.97438 * 8 6 5 10 10 C 1.54909 * 104.83564 * 155.91495 * 9 8 6 11 11 C 1.55152 * 101.58032 * 37.00513 * 10 9 8 12 12 O 1.42903 * 110.72100 * 82.86680 * 11 10 9 13 13 C 1.50703 * 110.71825 * 205.95483 * 11 10 9 14 14 H 1.07993 * 120.00249 * 357.56786 * 13 11 10 15 15 C 1.37877 * 119.99923 * 177.55974 * 13 11 10 16 16 N 1.31521 * 120.00053 * 0.02562 * 15 13 11 17 17 Si 1.86800 * 120.00236 * 180.02562 * 15 13 11 18 18 H 1.48492 * 109.47095 * 90.00027 * 17 15 13 19 19 H 1.48504 * 109.47221 * 210.00342 * 17 15 13 20 20 H 1.48506 * 109.46864 * 330.00097 * 17 15 13 21 21 C 1.47027 * 125.65010 * 180.02562 * 8 6 5 22 22 N 1.28866 * 125.31990 * 180.02562 * 2 1 3 23 23 H 1.08994 * 109.47739 * 269.95745 * 1 2 3 24 24 H 1.09010 * 109.47126 * 29.95788 * 1 2 3 25 25 H 1.09002 * 109.47157 * 149.95644 * 1 2 3 26 26 H 1.09002 * 110.36847 * 37.06750 * 9 8 6 27 27 H 1.09005 * 110.45737 * 274.79985 * 9 8 6 28 28 H 1.09005 * 111.00113 * 278.93173 * 10 9 8 29 29 H 1.08998 * 111.03822 * 155.09465 * 10 9 8 30 30 H 0.96700 * 114.00311 * 179.97438 * 12 11 10 31 31 H 0.97000 * 119.99959 * 179.97438 * 16 15 13 32 32 H 1.09003 * 109.87825 * 61.59771 * 21 8 6 33 33 H 1.09001 * 109.88209 * 300.43826 * 21 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.2091 1.0503 0.0000 4 7 3.4469 0.6876 0.0044 5 6 3.4685 -0.6541 -0.0012 6 6 4.6692 -1.5194 -0.0014 7 8 4.5469 -2.7286 -0.0011 8 7 5.8983 -0.9664 -0.0019 9 6 6.1904 0.4786 -0.0029 10 6 7.6091 0.5969 0.6080 11 6 8.3057 -0.6601 0.0232 12 8 8.7864 -0.4032 -1.2978 13 6 9.4303 -1.1117 0.9191 14 1 9.6736 -0.5468 1.8068 15 6 10.1484 -2.2461 0.6055 16 7 9.8523 -2.9339 -0.4758 17 14 11.5418 -2.8064 1.7163 18 1 11.0098 -3.7298 2.7503 19 1 12.5688 -3.5093 0.9060 20 1 12.1547 -1.6252 2.3756 21 6 7.1699 -1.7044 -0.0026 22 7 2.2100 -1.0515 -0.0005 23 1 -0.3634 -0.0008 1.0276 24 1 -0.3634 0.8904 -0.5132 25 1 -0.3633 -0.8896 -0.5145 26 1 5.4665 1.0124 0.6128 27 1 6.1820 0.8683 -1.0208 28 1 7.5708 0.5516 1.6964 29 1 8.1040 1.5088 0.2742 30 1 9.2308 -1.1576 -1.7084 31 1 10.3578 -3.7318 -0.6966 32 1 7.2453 -2.3120 -0.9045 33 1 7.2304 -2.3397 0.8810 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001469405625.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:53:01 Heat of formation + Delta-G solvation = 60.504963 kcal Electronic energy + Delta-G solvation = -20478.119009 eV Core-core repulsion = 17156.958335 eV Total energy + Delta-G solvation = -3321.160674 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 267.112 amu Computer time = 0.34 seconds Orbital eigenvalues (eV) -44.39653 -39.38070 -37.25552 -35.32214 -34.29234 -33.14551 -32.19080 -30.28858 -29.04626 -27.75598 -25.89032 -24.39383 -22.96597 -22.48131 -19.92063 -19.49753 -17.68756 -17.65852 -17.16711 -16.53289 -15.61385 -15.16005 -14.89488 -14.32559 -14.07510 -13.79113 -13.59490 -13.11753 -12.98114 -12.85629 -12.28613 -12.09895 -11.67166 -11.49617 -11.19039 -11.13084 -11.01299 -10.70919 -10.53443 -10.50731 -10.37286 -10.12829 -9.84430 -9.30065 -8.67591 -8.33716 -7.98688 -6.29286 -4.38087 0.99088 1.56690 1.69925 3.09111 3.22608 3.29768 3.32706 3.43649 4.04151 4.16575 4.28611 4.52927 4.75879 4.82867 4.98751 5.23663 5.50639 5.53470 5.85480 5.88745 5.92440 6.11582 6.33160 6.53878 6.79281 6.85166 6.88911 7.24021 7.34976 7.73010 7.94336 8.03167 8.12632 8.48235 8.66144 9.30641 9.41135 10.78425 Molecular weight = 267.11amu Principal moments of inertia in cm(-1) A = 0.041396 B = 0.004714 C = 0.004503 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 676.234284 B = 5938.829361 C = 6216.261250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.094 3.906 2 N -0.141 5.141 3 N -0.064 5.064 4 N -0.249 5.249 5 C 0.146 3.854 6 C 0.613 3.387 7 O -0.522 6.522 8 N -0.585 5.585 9 C 0.098 3.902 10 C -0.118 4.118 11 C 0.248 3.752 12 O -0.584 6.584 13 C -0.537 4.537 14 H 0.068 0.932 15 C 0.070 3.930 16 N -0.896 5.896 17 Si 0.905 3.095 18 H -0.278 1.278 19 H -0.284 1.284 20 H -0.272 1.272 21 C 0.104 3.896 22 N -0.254 5.254 23 H 0.103 0.897 24 H 0.114 0.886 25 H 0.112 0.888 26 H 0.083 0.917 27 H 0.069 0.931 28 H 0.077 0.923 29 H 0.079 0.921 30 H 0.385 0.615 31 H 0.271 0.729 32 H 0.071 0.929 33 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.295 6.404 0.715 16.597 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.053 5.053 3 N -0.058 5.058 4 N -0.124 5.124 5 C -0.138 4.138 6 C 0.394 3.606 7 O -0.396 6.396 8 N -0.317 5.317 9 C -0.024 4.024 10 C -0.156 4.156 11 C 0.208 3.792 12 O -0.393 6.393 13 C -0.576 4.576 14 H 0.087 0.913 15 C -0.133 4.133 16 N -0.535 5.535 17 Si 0.732 3.268 18 H -0.204 1.204 19 H -0.210 1.210 20 H -0.197 1.197 21 C -0.017 4.017 22 N -0.108 5.108 23 H 0.122 0.878 24 H 0.132 0.868 25 H 0.131 0.869 26 H 0.101 0.899 27 H 0.088 0.912 28 H 0.095 0.905 29 H 0.098 0.902 30 H 0.236 0.764 31 H 0.081 0.919 32 H 0.089 0.911 33 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -15.995 6.655 0.722 17.339 hybrid contribution 0.968 -1.382 0.412 1.737 sum -15.027 5.273 1.134 15.966 Atomic orbital electron populations 1.22481 0.68860 1.07010 1.06202 1.50227 1.10962 1.00877 1.43284 1.78914 0.96769 1.14244 1.15878 1.76264 1.09276 1.10428 1.16387 1.25546 0.93140 0.90154 1.04957 1.15760 0.79887 0.85369 0.79595 1.90825 1.85004 1.12660 1.51097 1.48557 1.04989 1.09709 1.68435 1.22596 0.97995 0.80286 1.01559 1.22787 0.93030 0.99916 0.99883 1.19499 0.89413 0.88253 0.82058 1.86103 1.78401 1.43779 1.31028 1.21528 1.15918 1.10330 1.09790 0.91336 1.25088 0.97260 0.95657 0.95290 1.69639 1.40988 1.17907 1.24921 0.86383 0.81299 0.78823 0.80311 1.20404 1.20985 1.19651 1.23224 0.79597 0.96407 1.02451 1.75096 1.02592 1.14131 1.18996 0.87841 0.86758 0.86937 0.89911 0.91246 0.90455 0.90225 0.76434 0.91888 0.91053 0.90919 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.47 11.62 59.85 0.70 1.16 16 2 N -0.14 -1.72 4.39 -16.65 -0.07 -1.79 16 3 N -0.06 -0.91 13.23 60.35 0.80 -0.11 16 4 N -0.25 -4.19 9.68 32.10 0.31 -3.88 16 5 C 0.15 2.69 7.95 -156.24 -1.24 1.45 16 6 C 0.61 13.14 7.86 -12.26 -0.10 13.04 16 7 O -0.52 -12.61 17.43 5.33 0.09 -12.52 16 8 N -0.58 -12.56 3.33 -171.57 -0.57 -13.13 16 9 C 0.10 1.87 6.15 -2.53 -0.02 1.85 16 10 C -0.12 -2.39 6.22 -24.59 -0.15 -2.55 16 11 C 0.25 5.99 0.86 -89.94 -0.08 5.91 16 12 O -0.58 -14.63 13.09 -35.23 -0.46 -15.09 16 13 C -0.54 -13.89 8.12 -34.44 -0.28 -14.17 16 14 H 0.07 1.74 7.77 -52.49 -0.41 1.33 16 15 C 0.07 1.81 5.26 -17.82 -0.09 1.72 16 16 N -0.90 -23.57 10.97 55.43 0.61 -22.97 16 17 Si 0.90 20.27 29.54 -169.99 -5.02 15.25 16 18 H -0.28 -6.25 7.11 56.52 0.40 -5.85 16 19 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 20 H -0.27 -6.04 7.11 56.52 0.40 -5.63 16 21 C 0.10 2.51 5.39 -3.07 -0.02 2.49 16 22 N -0.25 -4.11 12.17 32.11 0.39 -3.72 16 23 H 0.10 0.31 8.14 -51.93 -0.42 -0.12 16 24 H 0.11 0.28 8.14 -51.92 -0.42 -0.14 16 25 H 0.11 0.39 8.14 -51.93 -0.42 -0.03 16 26 H 0.08 1.44 6.18 -51.93 -0.32 1.11 16 27 H 0.07 1.31 8.14 -51.93 -0.42 0.89 16 28 H 0.08 1.50 8.04 -51.93 -0.42 1.08 16 29 H 0.08 1.52 8.14 -51.93 -0.42 1.10 16 30 H 0.38 9.86 7.17 45.56 0.33 10.19 16 31 H 0.27 6.85 8.31 -40.82 -0.34 6.51 16 32 H 0.07 1.85 8.01 -51.93 -0.42 1.44 16 33 H 0.07 1.87 7.82 -51.93 -0.41 1.47 16 LS Contribution 288.60 15.07 4.35 4.35 Total: -1.00 -31.55 288.60 -3.75 -35.30 By element: Atomic # 1 Polarization: 10.29 SS G_CDS: -2.89 Total: 7.40 kcal Atomic # 6 Polarization: 12.18 SS G_CDS: -1.28 Total: 10.90 kcal Atomic # 7 Polarization: -47.06 SS G_CDS: 1.46 Total: -45.60 kcal Atomic # 8 Polarization: -27.24 SS G_CDS: -0.37 Total: -27.60 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.02 Total: 15.25 kcal Total LS contribution 4.35 Total: 4.35 kcal Total: -31.55 -3.75 -35.30 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001469405625.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.803 kcal (2) G-P(sol) polarization free energy of solvation -31.553 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.251 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.746 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.298 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.505 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.34 seconds