Wall clock time and date at job start Mon Mar 30 2020 00:39:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30994 * 1 3 3 C 1.50706 * 120.00304 * 2 1 4 4 N 1.46493 * 109.47299 * 124.72356 * 3 2 1 5 5 C 1.46499 * 120.00031 * 270.00423 * 4 3 2 6 6 C 1.50696 * 109.47541 * 89.99838 * 5 4 3 7 7 H 1.07997 * 119.99931 * 0.02562 * 6 5 4 8 8 C 1.37879 * 120.00421 * 179.97438 * 6 5 4 9 9 N 1.31512 * 119.99547 * 0.02562 * 8 6 5 10 10 Si 1.86800 * 120.00176 * 180.02562 * 8 6 5 11 11 H 1.48499 * 109.47235 * 60.00056 * 10 8 6 12 12 H 1.48500 * 109.47150 * 179.97438 * 10 8 6 13 13 H 1.48497 * 109.47319 * 300.00152 * 10 8 6 14 14 C 1.38548 * 120.00195 * 89.99951 * 4 3 2 15 15 C 1.39587 * 120.47266 * 5.00196 * 14 4 3 16 16 C 1.38295 * 118.47340 * 179.97438 * 15 14 4 17 17 Cl 1.73604 * 120.36566 * 179.97438 * 16 15 14 18 18 N 1.32619 * 119.26062 * 0.02562 * 16 15 14 19 19 C 1.32460 * 120.91354 * 359.97438 * 18 16 15 20 20 N 1.38389 * 119.17253 * 179.97438 * 19 18 16 21 21 N 1.32464 * 121.65836 * 359.71635 * 19 18 16 22 22 H 1.08002 * 120.00350 * 180.02562 * 1 2 3 23 23 H 1.08004 * 119.99740 * 0.02562 * 1 2 3 24 24 H 1.08000 * 120.00336 * 179.72373 * 2 1 3 25 25 H 1.08997 * 109.47325 * 244.72857 * 3 2 1 26 26 H 1.09004 * 109.46539 * 4.72066 * 3 2 1 27 27 H 1.09003 * 109.47282 * 209.99739 * 5 4 3 28 28 H 1.09002 * 109.46972 * 329.99589 * 5 4 3 29 29 H 0.97004 * 119.99677 * 180.02562 * 9 8 6 30 30 H 1.07997 * 120.76537 * 359.97438 * 15 14 4 31 31 H 0.96999 * 119.99944 * 0.02562 * 20 19 18 32 32 H 0.97005 * 120.00209 * 179.97438 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3099 0.0000 0.0000 3 6 2.0635 1.3051 0.0000 4 7 2.9890 1.3346 1.1352 5 6 2.5487 1.8707 2.4255 6 6 1.9616 0.7597 3.2572 7 1 1.9209 -0.2454 2.8642 8 6 1.4773 1.0260 4.5204 9 7 1.5274 2.2499 4.9992 10 14 0.7502 -0.3514 5.5516 11 1 1.7792 -1.3985 5.7753 12 1 0.3049 0.1918 6.8600 13 1 -0.4110 -0.9428 4.8396 14 6 4.2807 0.8555 0.9886 15 6 4.7437 0.4390 -0.2607 16 6 6.0403 -0.0316 -0.3600 17 17 6.6665 -0.5628 -1.8896 18 7 6.7997 -0.0735 0.7265 19 6 6.3327 0.3286 1.8990 20 7 7.1562 0.2686 3.0096 21 7 5.0989 0.7913 2.0344 22 1 -0.5401 -0.9353 0.0004 23 1 -0.5400 0.9354 -0.0004 24 1 1.8500 -0.9353 0.0045 25 1 2.6251 1.4004 -0.9293 26 1 1.3582 2.1319 0.0846 27 1 3.4010 2.3047 2.9486 28 1 1.7936 2.6394 2.2609 29 1 1.1870 2.4372 5.8880 30 1 4.1041 0.4833 -1.1298 31 1 8.0632 -0.0644 2.9235 32 1 6.8268 0.5604 3.8741 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291929529.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:39:14 Heat of formation + Delta-G solvation = 78.751611 kcal Electronic energy + Delta-G solvation = -18059.984885 eV Core-core repulsion = 15082.605947 eV Total energy + Delta-G solvation = -2977.378938 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 268.079 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -40.37481 -37.22318 -36.56921 -34.16347 -33.47685 -32.76089 -31.43429 -29.63835 -27.44529 -25.53939 -23.71905 -22.61769 -21.08827 -19.57048 -17.83987 -17.38717 -16.44934 -15.80641 -15.50271 -14.83746 -14.75380 -14.68052 -14.30782 -14.14802 -13.58838 -12.88101 -12.42750 -12.17241 -11.61491 -11.41552 -11.31835 -11.16438 -10.84805 -10.74602 -10.58643 -10.30445 -10.16217 -9.93455 -9.50574 -8.97103 -8.58082 -8.43090 -8.09807 -7.21269 -6.04887 -4.08573 1.59168 1.92627 1.96755 2.63453 3.29737 3.33966 3.37219 3.53534 3.89684 4.41072 4.46947 5.06601 5.27759 5.30948 5.33637 5.48327 5.53460 5.76734 5.82973 6.02768 6.27049 6.30197 6.86917 6.97405 7.12024 7.26272 7.43193 7.51858 7.64774 7.86030 8.09894 8.13387 8.22070 8.92049 9.01803 9.54848 11.02170 Molecular weight = 268.08amu Principal moments of inertia in cm(-1) A = 0.018537 B = 0.006560 C = 0.005355 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1510.170334 B = 4267.339724 C = 5227.850267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C -0.157 4.157 3 C 0.150 3.850 4 N -0.564 5.564 5 C 0.253 3.747 6 C -0.513 4.513 7 H 0.056 0.944 8 C 0.062 3.938 9 N -0.897 5.897 10 Si 0.894 3.106 11 H -0.278 1.278 12 H -0.287 1.287 13 H -0.278 1.278 14 C 0.495 3.505 15 C -0.341 4.341 16 C 0.286 3.714 17 Cl -0.042 7.042 18 N -0.625 5.625 19 C 0.616 3.384 20 N -0.822 5.822 21 N -0.594 5.594 22 H 0.092 0.908 23 H 0.096 0.904 24 H 0.104 0.896 25 H 0.078 0.922 26 H 0.085 0.915 27 H 0.049 0.951 28 H 0.031 0.969 29 H 0.263 0.737 30 H 0.142 0.858 31 H 0.409 0.591 32 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.416 -2.658 -10.157 11.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.216 4.216 2 C -0.177 4.177 3 C 0.027 3.973 4 N -0.271 5.271 5 C 0.134 3.866 6 C -0.552 4.552 7 H 0.074 0.926 8 C -0.139 4.139 9 N -0.536 5.536 10 Si 0.722 3.278 11 H -0.204 1.204 12 H -0.213 1.213 13 H -0.203 1.203 14 C 0.247 3.753 15 C -0.374 4.374 16 C 0.115 3.885 17 Cl -0.014 7.014 18 N -0.357 5.357 19 C 0.255 3.745 20 N -0.371 5.371 21 N -0.328 5.328 22 H 0.111 0.889 23 H 0.114 0.886 24 H 0.122 0.878 25 H 0.096 0.904 26 H 0.103 0.897 27 H 0.067 0.933 28 H 0.049 0.951 29 H 0.072 0.928 30 H 0.160 0.840 31 H 0.240 0.760 32 H 0.248 0.752 Dipole moment (debyes) X Y Z Total from point charges 5.747 -2.501 -9.324 11.234 hybrid contribution -0.681 -0.956 0.265 1.203 sum 5.066 -3.457 -9.058 10.939 Atomic orbital electron populations 1.23668 0.95738 1.01460 1.00738 1.23198 0.96228 0.98665 0.99576 1.20617 0.91867 0.95997 0.88852 1.47213 1.06111 1.60014 1.13736 1.19408 0.95924 0.93992 0.77272 1.21321 1.39019 0.95035 0.99797 0.92565 1.24871 0.96091 0.95517 0.97458 1.69914 1.46952 1.18928 1.17849 0.86626 0.79451 0.82294 0.79428 1.20388 1.21280 1.20346 1.18005 0.85987 0.84649 0.86674 1.21462 0.97512 1.19017 0.99409 1.20920 0.88703 0.91580 0.87257 1.98373 1.88384 1.88537 1.26097 1.66956 1.39254 1.31300 0.98176 1.18661 0.85089 0.85643 0.85076 1.41641 1.15202 1.72547 1.07756 1.67562 1.03870 1.28896 1.32451 0.88947 0.88615 0.87825 0.90449 0.89694 0.93285 0.95102 0.92778 0.83997 0.76039 0.75220 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.64 14.32 29.02 0.42 -2.23 16 2 C -0.16 -2.52 9.85 -36.02 -0.35 -2.88 16 3 C 0.15 2.42 5.75 -5.19 -0.03 2.39 16 4 N -0.56 -11.47 2.54 -176.43 -0.45 -11.92 16 5 C 0.25 6.21 5.20 -5.20 -0.03 6.18 16 6 C -0.51 -13.77 9.39 -34.44 -0.32 -14.10 16 7 H 0.06 1.55 7.81 -52.49 -0.41 1.14 16 8 C 0.06 1.71 5.46 -17.82 -0.10 1.61 16 9 N -0.90 -25.61 13.29 55.43 0.74 -24.88 16 10 Si 0.89 21.45 29.54 -169.99 -5.02 16.43 16 11 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 12 H -0.29 -6.81 7.11 56.52 0.40 -6.40 16 13 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 14 C 0.50 10.00 7.38 -154.83 -1.14 8.86 16 15 C -0.34 -5.88 9.12 -39.06 -0.36 -6.23 16 16 C 0.29 4.88 7.32 -17.19 -0.13 4.76 16 17 Cl -0.04 -0.59 29.15 -51.86 -1.51 -2.10 16 18 N -0.62 -11.33 10.45 -11.12 -0.12 -11.45 16 19 C 0.62 11.54 8.67 -322.91 -2.80 8.74 16 20 N -0.82 -11.98 9.07 29.75 0.27 -11.71 16 21 N -0.59 -12.68 9.33 -13.18 -0.12 -12.80 16 22 H 0.09 1.26 8.06 -52.49 -0.42 0.83 16 23 H 0.10 1.34 7.84 -52.48 -0.41 0.93 16 24 H 0.10 1.71 8.06 -52.49 -0.42 1.29 16 25 H 0.08 1.04 6.04 -51.93 -0.31 0.73 16 26 H 0.08 1.31 7.54 -51.93 -0.39 0.92 16 27 H 0.05 1.33 7.47 -51.93 -0.39 0.94 16 28 H 0.03 0.78 7.89 -51.93 -0.41 0.37 16 29 H 0.26 7.17 8.31 -40.82 -0.34 6.83 16 30 H 0.14 2.08 6.15 -52.49 -0.32 1.76 16 31 H 0.41 4.77 8.94 -40.82 -0.37 4.40 16 32 H 0.42 5.78 8.94 -40.82 -0.37 5.41 16 LS Contribution 300.21 15.07 4.52 4.52 Total: -1.00 -30.24 300.21 -9.89 -40.13 By element: Atomic # 1 Polarization: 10.02 SS G_CDS: -3.36 Total: 6.66 kcal Atomic # 6 Polarization: 11.95 SS G_CDS: -4.84 Total: 7.11 kcal Atomic # 7 Polarization: -73.07 SS G_CDS: 0.32 Total: -72.75 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -5.02 Total: 16.43 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -1.51 Total: -2.10 kcal Total LS contribution 4.52 Total: 4.52 kcal Total: -30.24 -9.89 -40.13 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291929529.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.880 kcal (2) G-P(sol) polarization free energy of solvation -30.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.641 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.890 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.129 kcal (6) G-S(sol) free energy of system = (1) + (5) 78.752 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds