Wall clock time and date at job start Mon Mar 30 2020 00:38:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.38216 * 120.36978 * 2 1 4 4 N 1.31898 * 120.93004 * 179.97438 * 3 2 1 5 5 C 1.31893 * 121.77394 * 0.02562 * 4 3 2 6 6 Cl 1.73608 * 119.67906 * 179.97438 * 5 4 3 7 7 C 1.38990 * 120.64367 * 0.02633 * 5 4 3 8 8 N 1.40023 * 120.49623 * 179.97438 * 7 5 4 9 9 C 1.34785 * 119.99796 * 204.20126 * 8 7 5 10 10 O 1.21585 * 120.00173 * 5.70216 * 9 8 7 11 11 N 1.34776 * 119.99652 * 185.69879 * 9 8 7 12 12 C 1.46498 * 119.99776 * 179.97438 * 11 9 8 13 13 C 1.50700 * 109.46923 * 180.02562 * 12 11 9 14 14 H 1.08001 * 120.00364 * 0.02562 * 13 12 11 15 15 C 1.37883 * 120.00045 * 180.02562 * 13 12 11 16 16 N 1.31509 * 120.00320 * 180.02562 * 15 13 12 17 17 Si 1.86801 * 119.99815 * 0.02562 * 15 13 12 18 18 H 1.48500 * 109.47086 * 89.99858 * 17 15 13 19 19 H 1.48494 * 109.47330 * 210.00095 * 17 15 13 20 20 H 1.48503 * 109.47445 * 330.00363 * 17 15 13 21 21 C 1.38571 * 120.37017 * 179.73459 * 2 1 3 22 22 H 1.09006 * 109.47387 * 89.99693 * 1 2 3 23 23 H 1.09005 * 109.47403 * 209.99449 * 1 2 3 24 24 H 1.08999 * 109.47271 * 329.99629 * 1 2 3 25 25 H 1.07999 * 119.53584 * 0.02562 * 3 2 1 26 26 H 0.96993 * 120.00025 * 24.18890 * 8 7 5 27 27 H 0.97001 * 120.00121 * 0.02562 * 11 9 8 28 28 H 1.09000 * 109.47555 * 300.00754 * 12 11 9 29 29 H 1.09004 * 109.46803 * 60.00654 * 12 11 9 30 30 H 0.96998 * 119.99979 * 179.97438 * 16 15 13 31 31 H 1.08006 * 120.80715 * 359.97049 * 21 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2057 1.1925 0.0000 4 7 3.5247 1.2054 0.0005 5 6 4.2301 0.0910 0.0005 6 17 5.9643 0.1714 0.0005 7 6 3.5986 -1.1472 -0.0005 8 7 4.3506 -2.3284 -0.0010 9 6 3.8145 -3.4683 -0.4805 10 8 2.7187 -3.4504 -1.0069 11 7 4.4933 -4.6280 -0.3765 12 6 3.9104 -5.8671 -0.8972 13 6 4.8629 -7.0099 -0.6570 14 1 5.8078 -6.8312 -0.1653 15 6 4.5282 -8.2837 -1.0649 16 7 5.3591 -9.2812 -0.8549 17 14 2.8943 -8.5927 -1.9160 18 1 3.0627 -8.4350 -3.3830 19 1 2.4330 -9.9720 -1.6162 20 1 1.8882 -7.6167 -1.4256 21 6 2.2075 -1.1955 0.0055 22 1 -0.3634 0.0001 -1.0277 23 1 -0.3634 -0.8901 0.5138 24 1 -0.3634 0.8899 0.5139 25 1 1.6642 2.1269 0.0004 26 1 5.2573 -2.3262 0.3435 27 1 5.3674 -4.6423 0.0437 28 1 2.9676 -6.0671 -0.3881 29 1 3.7305 -5.7624 -1.9671 30 1 5.1235 -10.1773 -1.1416 31 1 1.6868 -2.1418 0.0104 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000785995050.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:38:36 Heat of formation + Delta-G solvation = -3.544450 kcal Electronic energy + Delta-G solvation = -17586.895426 eV Core-core repulsion = 14508.229201 eV Total energy + Delta-G solvation = -3078.666225 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 269.067 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -40.94213 -39.34769 -36.81832 -35.29913 -34.44819 -33.60436 -32.51465 -30.36632 -27.78735 -27.36621 -24.22768 -22.64866 -21.72932 -20.61289 -18.75757 -17.57389 -17.24393 -16.69040 -16.23135 -15.27686 -14.81688 -14.63879 -14.30458 -14.11118 -13.42049 -13.30092 -13.23172 -12.90244 -12.59564 -12.44688 -12.10874 -11.65091 -11.43854 -11.12271 -11.05376 -10.80802 -10.18543 -10.02963 -9.64850 -9.56992 -9.24536 -8.87570 -8.49573 -8.08692 -6.28175 -4.31534 0.77369 1.11251 1.70314 2.73428 3.21638 3.27043 3.29429 3.35792 3.66725 4.26601 4.38777 4.45263 4.59414 4.89191 4.91422 4.92404 5.07026 5.42606 5.47762 5.72735 5.80515 6.07479 6.19916 6.51804 6.62566 6.95778 6.98321 7.11960 7.32348 7.58523 8.11297 8.41144 8.67765 8.82306 9.30565 10.83606 Molecular weight = 269.07amu Principal moments of inertia in cm(-1) A = 0.025489 B = 0.004572 C = 0.003931 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1098.246460 B = 6122.973584 C = 7121.043425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.109 4.109 3 C 0.081 3.919 4 N -0.452 5.452 5 C 0.122 3.878 6 Cl -0.035 7.035 7 C 0.163 3.837 8 N -0.682 5.682 9 C 0.694 3.306 10 O -0.582 6.582 11 N -0.709 5.709 12 C 0.237 3.763 13 C -0.547 4.547 14 H 0.080 0.920 15 C 0.080 3.920 16 N -0.890 5.890 17 Si 0.877 3.123 18 H -0.272 1.272 19 H -0.283 1.283 20 H -0.260 1.260 21 C -0.084 4.084 22 H 0.077 0.923 23 H 0.072 0.928 24 H 0.071 0.929 25 H 0.163 0.837 26 H 0.410 0.590 27 H 0.397 0.603 28 H 0.027 0.973 29 H 0.023 0.977 30 H 0.269 0.731 31 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.382 18.804 3.330 19.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C -0.112 4.112 3 C -0.078 4.078 4 N -0.162 5.162 5 C -0.045 4.045 6 Cl -0.006 7.006 7 C 0.062 3.938 8 N -0.329 5.329 9 C 0.394 3.606 10 O -0.461 6.461 11 N -0.360 5.360 12 C 0.115 3.885 13 C -0.585 4.585 14 H 0.098 0.902 15 C -0.125 4.125 16 N -0.527 5.527 17 Si 0.703 3.297 18 H -0.198 1.198 19 H -0.208 1.208 20 H -0.185 1.185 21 C -0.113 4.113 22 H 0.096 0.904 23 H 0.091 0.909 24 H 0.090 0.910 25 H 0.180 0.820 26 H 0.247 0.753 27 H 0.231 0.769 28 H 0.045 0.955 29 H 0.041 0.959 30 H 0.079 0.921 31 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges -5.694 19.218 2.817 20.241 hybrid contribution 0.043 -1.080 -0.130 1.089 sum -5.651 18.138 2.687 19.187 Atomic orbital electron populations 1.20732 0.89508 1.03324 1.03059 1.20959 0.98093 0.93159 0.98947 1.22411 0.87927 0.97940 0.99564 1.66896 1.08692 1.28788 1.11809 1.21208 0.87363 0.88606 1.07367 1.98388 1.07026 1.98391 1.96832 1.18101 0.91658 0.84818 0.99257 1.42822 1.18080 1.06738 1.65262 1.16083 0.84715 0.80276 0.79478 1.90837 1.20479 1.85226 1.49523 1.45497 1.21947 1.06591 1.61981 1.19486 0.94938 0.79841 0.94282 1.21047 1.04927 0.91067 1.41447 0.90152 1.24768 0.97145 0.95614 0.94940 1.69868 1.36151 1.00520 1.46138 0.86818 0.84234 0.78105 0.80527 1.19781 1.20823 1.18472 1.21919 0.91309 1.00583 0.97469 0.90412 0.90858 0.90962 0.81990 0.75310 0.76934 0.95466 0.95933 0.92135 0.81269 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.88 10.04 36.00 0.36 -0.52 16 2 C -0.11 -1.23 5.89 -104.51 -0.62 -1.84 16 3 C 0.08 0.89 10.85 -17.53 -0.19 0.70 16 4 N -0.45 -6.07 10.33 -10.21 -0.11 -6.18 16 5 C 0.12 1.69 7.29 -17.25 -0.13 1.57 16 6 Cl -0.03 -0.43 27.94 -51.86 -1.45 -1.88 16 7 C 0.16 2.39 6.45 -83.48 -0.54 1.85 16 8 N -0.68 -10.06 5.21 -14.09 -0.07 -10.14 16 9 C 0.69 12.82 8.38 -86.91 -0.73 12.09 16 10 O -0.58 -12.36 13.55 5.29 0.07 -12.29 16 11 N -0.71 -13.68 5.55 -66.41 -0.37 -14.05 16 12 C 0.24 5.56 4.50 -5.19 -0.02 5.53 16 13 C -0.55 -14.49 9.83 -34.44 -0.34 -14.83 16 14 H 0.08 2.22 7.84 -52.49 -0.41 1.81 16 15 C 0.08 2.19 5.47 -17.82 -0.10 2.09 16 16 N -0.89 -25.82 13.96 55.43 0.77 -25.05 16 17 Si 0.88 20.76 27.47 -169.99 -4.67 16.09 16 18 H -0.27 -6.38 7.11 56.52 0.40 -5.98 16 19 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 20 H -0.26 -6.07 6.54 56.52 0.37 -5.70 16 21 C -0.08 -1.20 8.50 -39.10 -0.33 -1.53 16 22 H 0.08 0.59 8.14 -51.93 -0.42 0.17 16 23 H 0.07 0.59 8.09 -51.93 -0.42 0.17 16 24 H 0.07 0.42 8.09 -51.93 -0.42 0.00 16 25 H 0.16 1.23 8.06 -52.49 -0.42 0.81 16 26 H 0.41 5.03 7.78 -40.82 -0.32 4.72 16 27 H 0.40 6.68 8.34 -40.82 -0.34 6.34 16 28 H 0.03 0.67 7.20 -51.93 -0.37 0.29 16 29 H 0.02 0.55 7.57 -51.93 -0.39 0.16 16 30 H 0.27 7.29 8.31 -40.82 -0.34 6.96 16 31 H 0.17 2.67 5.89 -52.48 -0.31 2.36 16 LS Contribution 287.30 15.07 4.33 4.33 Total: -1.00 -31.00 287.30 -7.12 -38.12 By element: Atomic # 1 Polarization: 8.93 SS G_CDS: -3.00 Total: 5.93 kcal Atomic # 6 Polarization: 7.74 SS G_CDS: -2.63 Total: 5.11 kcal Atomic # 7 Polarization: -55.64 SS G_CDS: 0.23 Total: -55.41 kcal Atomic # 8 Polarization: -12.36 SS G_CDS: 0.07 Total: -12.29 kcal Atomic # 14 Polarization: 20.76 SS G_CDS: -4.67 Total: 16.09 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.45 Total: -1.88 kcal Total LS contribution 4.33 Total: 4.33 kcal Total: -31.00 -7.12 -38.12 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000785995050.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 34.572 kcal (2) G-P(sol) polarization free energy of solvation -30.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 3.575 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.119 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.117 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.544 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds