Wall clock time and date at job start Mon Mar 30 2020 01:43:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34222 * 117.00498 * 2 1 4 4 O 1.20831 * 120.00029 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00350 * 180.02562 * 3 2 1 6 6 N 1.46507 * 109.47382 * 180.02562 * 5 3 2 7 7 C 1.39929 * 119.99810 * 180.02562 * 6 5 3 8 8 C 1.38713 * 120.08073 * 0.02562 * 7 6 5 9 9 C 1.38220 * 120.01474 * 179.97438 * 8 7 6 10 10 C 1.38522 * 120.17631 * 0.02562 * 9 8 7 11 11 F 1.35098 * 119.92146 * 179.97438 * 10 9 8 12 12 C 1.38364 * 120.15993 * 0.02562 * 10 9 8 13 13 C 1.38720 * 119.97944 * 359.97163 * 12 10 9 14 14 O 1.35794 * 120.08317 * 180.30047 * 13 12 10 15 15 C 1.34801 * 117.00313 * 354.40795 * 14 13 12 16 16 H 1.07999 * 119.99778 * 5.07674 * 15 14 13 17 17 C 1.38629 * 119.99953 * 185.06987 * 15 14 13 18 18 N 1.31578 * 120.00102 * 180.02562 * 17 15 14 19 19 Si 1.86799 * 119.99956 * 0.02562 * 17 15 14 20 20 H 1.48502 * 109.47070 * 90.00137 * 19 17 15 21 21 H 1.48510 * 109.46991 * 209.99529 * 19 17 15 22 22 H 1.48496 * 109.47420 * 329.99579 * 19 17 15 23 23 H 1.08997 * 109.47331 * 179.97438 * 1 2 3 24 24 H 1.09002 * 109.46840 * 299.99766 * 1 2 3 25 25 H 1.08996 * 109.46887 * 59.99574 * 1 2 3 26 26 H 1.09010 * 109.47278 * 60.00324 * 5 3 2 27 27 H 1.08995 * 109.47361 * 300.00528 * 5 3 2 28 28 H 0.96996 * 119.99569 * 359.97438 * 6 5 3 29 29 H 1.07995 * 119.99180 * 359.97438 * 8 7 6 30 30 H 1.08000 * 119.90951 * 180.02562 * 9 8 7 31 31 H 1.07997 * 120.00817 * 180.02562 * 12 10 9 32 32 H 0.96994 * 120.00549 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4035 2.2093 0.0005 5 6 3.5664 1.2747 -0.0006 6 7 3.9819 2.6796 0.0002 7 6 5.3424 3.0068 -0.0007 8 6 6.2990 2.0024 -0.0029 9 6 7.6425 2.3271 -0.0043 10 6 8.0380 3.6547 -0.0031 11 9 9.3525 3.9663 -0.0040 12 6 7.0899 4.6624 0.0001 13 6 5.7398 4.3440 0.0015 14 8 4.8075 5.3313 -0.0015 15 6 5.2564 6.5973 0.1112 16 1 6.3181 6.7953 0.1160 17 6 4.3554 7.6451 0.2209 18 7 4.7936 8.8810 0.3304 19 14 2.5191 7.3025 0.2130 20 1 2.0508 7.0817 1.6049 21 1 1.8014 8.4635 -0.3723 22 1 2.2451 6.0902 -0.5997 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5139 -0.8899 26 1 3.9558 0.7808 -0.8909 27 1 3.9565 0.7804 0.8890 28 1 3.3138 3.3829 0.0005 29 1 5.9940 0.9664 -0.0034 30 1 8.3859 1.5437 -0.0064 31 1 7.4009 5.6966 0.0007 32 1 4.1632 9.6141 0.4075 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000150760067.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:43:25 Heat of formation + Delta-G solvation = -120.244657 kcal Electronic energy + Delta-G solvation = -20004.347204 eV Core-core repulsion = 16459.991352 eV Total energy + Delta-G solvation = -3544.355852 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 269.090 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -48.13929 -40.67436 -39.36969 -37.08518 -36.55775 -34.67820 -32.41719 -29.93518 -29.53095 -27.92202 -25.91041 -25.34622 -22.19601 -21.42548 -20.75849 -18.43194 -18.07795 -17.47813 -17.05907 -16.81888 -15.97214 -15.51263 -15.33380 -14.97660 -14.46863 -14.29763 -14.02079 -13.79088 -13.71686 -13.25272 -12.95664 -12.93087 -12.35570 -12.27877 -12.13507 -11.59540 -11.41455 -11.04187 -10.81883 -10.72507 -10.61287 -10.32517 -9.57773 -9.52188 -8.90725 -7.91335 -6.71458 -6.44511 -4.09629 1.95285 1.98935 2.07354 2.34354 3.20970 3.26002 3.41143 3.78432 4.21378 4.30791 4.55180 4.61433 4.87291 4.94716 5.03669 5.09337 5.14958 5.20048 5.27920 5.43057 5.68885 5.93685 6.09877 6.14935 6.39747 6.66625 6.89028 6.94668 7.35900 7.50734 7.56155 7.79442 7.97852 8.11734 8.89738 9.47719 10.62665 Molecular weight = 269.09amu Principal moments of inertia in cm(-1) A = 0.012032 B = 0.007573 C = 0.004665 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2326.608357 B = 3696.647700 C = 6001.014851 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.036 3.964 2 O -0.359 6.359 3 C 0.455 3.545 4 O -0.495 6.495 5 C 0.143 3.857 6 N -0.744 5.744 7 C 0.148 3.852 8 C -0.141 4.141 9 C -0.191 4.191 10 C 0.093 3.907 11 F -0.154 7.154 12 C -0.227 4.227 13 C 0.132 3.868 14 O -0.212 6.212 15 C -0.386 4.386 16 H 0.108 0.892 17 C 0.065 3.935 18 N -0.876 5.876 19 Si 0.902 3.098 20 H -0.273 1.273 21 H -0.282 1.282 22 H -0.257 1.257 23 H 0.102 0.898 24 H 0.064 0.936 25 H 0.064 0.936 26 H 0.099 0.901 27 H 0.099 0.901 28 H 0.415 0.585 29 H 0.124 0.876 30 H 0.121 0.879 31 H 0.146 0.854 32 H 0.280 0.720 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.401 -17.531 -0.577 18.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.275 6.275 3 C 0.297 3.703 4 O -0.381 6.381 5 C 0.016 3.984 6 N -0.384 5.384 7 C 0.049 3.951 8 C -0.165 4.165 9 C -0.211 4.211 10 C 0.072 3.928 11 F -0.132 7.132 12 C -0.248 4.248 13 C 0.078 3.922 14 O -0.118 6.118 15 C -0.462 4.462 16 H 0.125 0.875 17 C -0.138 4.138 18 N -0.513 5.513 19 Si 0.728 3.272 20 H -0.199 1.199 21 H -0.208 1.208 22 H -0.181 1.181 23 H 0.121 0.879 24 H 0.083 0.917 25 H 0.082 0.918 26 H 0.117 0.883 27 H 0.117 0.883 28 H 0.254 0.746 29 H 0.142 0.858 30 H 0.139 0.861 31 H 0.164 0.836 32 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges -4.935 -17.146 -0.576 17.851 hybrid contribution -0.905 0.500 0.040 1.035 sum -5.840 -16.645 -0.536 17.648 Atomic orbital electron populations 1.23290 0.75967 1.03713 1.02825 1.86465 1.23699 1.33012 1.84314 1.23775 0.92272 0.81618 0.72652 1.90728 1.66735 1.36258 1.44355 1.20484 0.86287 0.87008 1.04589 1.44030 1.04621 1.04492 1.85245 1.16969 0.83518 0.90224 1.04434 1.19964 0.91199 0.97003 1.08329 1.20351 0.95935 0.94026 1.10830 1.17266 0.77002 0.93204 1.05352 1.91403 1.33372 1.94021 1.94446 1.20931 0.91521 1.00360 1.11997 1.18264 0.88146 0.86957 0.98881 1.83515 1.32289 1.15168 1.80799 1.20732 0.95760 0.78135 1.51532 0.87497 1.24441 1.00113 0.93730 0.95553 1.69649 1.36133 0.98453 1.47069 0.86232 0.82993 0.78696 0.79315 1.19864 1.20751 1.18114 0.87946 0.91740 0.91753 0.88308 0.88303 0.74596 0.85768 0.86105 0.83642 0.90966 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.29 10.56 101.05 1.07 1.36 16 2 O -0.36 -3.86 10.56 -39.24 -0.41 -4.27 16 3 C 0.45 6.00 8.03 36.00 0.29 6.28 16 4 O -0.49 -8.40 15.42 -18.75 -0.29 -8.69 16 5 C 0.14 1.72 5.51 -5.19 -0.03 1.69 16 6 N -0.74 -12.70 5.70 -59.63 -0.34 -13.04 16 7 C 0.15 2.76 6.67 -83.52 -0.56 2.21 16 8 C -0.14 -2.21 9.31 -39.41 -0.37 -2.57 16 9 C -0.19 -3.15 10.02 -39.48 -0.40 -3.54 16 10 C 0.09 1.79 7.29 -39.43 -0.29 1.50 16 11 F -0.15 -2.94 17.26 2.25 0.04 -2.91 16 12 C -0.23 -4.96 9.14 -39.36 -0.36 -5.32 16 13 C 0.13 2.96 6.67 -38.94 -0.26 2.70 16 14 O -0.21 -5.43 7.83 -0.01 0.00 -5.43 16 15 C -0.39 -10.75 9.95 30.88 0.31 -10.44 16 16 H 0.11 3.06 5.44 -52.49 -0.29 2.77 16 17 C 0.07 1.83 5.49 -17.52 -0.10 1.73 16 18 N -0.88 -25.25 13.96 55.48 0.77 -24.48 16 19 Si 0.90 21.84 28.62 -169.99 -4.86 16.98 16 20 H -0.27 -6.55 7.11 56.52 0.40 -6.15 16 21 H -0.28 -6.60 7.11 56.52 0.40 -6.20 16 22 H -0.26 -6.27 7.11 56.52 0.40 -5.87 16 23 H 0.10 0.52 8.14 -51.93 -0.42 0.09 16 24 H 0.06 0.55 8.13 -51.93 -0.42 0.12 16 25 H 0.06 0.54 8.13 -51.93 -0.42 0.12 16 26 H 0.10 0.97 7.95 -51.92 -0.41 0.55 16 27 H 0.10 0.97 7.95 -51.93 -0.41 0.56 16 28 H 0.42 8.18 6.81 -40.82 -0.28 7.90 16 29 H 0.12 1.46 6.73 -52.49 -0.35 1.11 16 30 H 0.12 1.66 8.06 -52.49 -0.42 1.23 16 31 H 0.15 3.38 5.64 -52.49 -0.30 3.09 16 32 H 0.28 7.48 8.31 -40.82 -0.34 7.14 16 LS Contribution 290.61 15.07 4.38 4.38 Total: -1.00 -31.13 290.61 -4.27 -35.40 By element: Atomic # 1 Polarization: 9.33 SS G_CDS: -2.86 Total: 6.47 kcal Atomic # 6 Polarization: -3.72 SS G_CDS: -0.69 Total: -4.41 kcal Atomic # 7 Polarization: -37.96 SS G_CDS: 0.43 Total: -37.52 kcal Atomic # 8 Polarization: -17.69 SS G_CDS: -0.70 Total: -18.39 kcal Atomic # 9 Polarization: -2.94 SS G_CDS: 0.04 Total: -2.91 kcal Atomic # 14 Polarization: 21.84 SS G_CDS: -4.86 Total: 16.98 kcal Total LS contribution 4.38 Total: 4.38 kcal Total: -31.13 -4.27 -35.40 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000150760067.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.845 kcal (2) G-P(sol) polarization free energy of solvation -31.133 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.977 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.400 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.245 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds