Wall clock time and date at job start Mon Mar 30 2020 00:56:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 N 1.46499 * 109.47221 * 2 1 4 4 C 1.36943 * 119.99927 * 272.85351 * 3 2 1 5 5 H 1.08000 * 119.99854 * 176.47935 * 4 3 2 6 6 C 1.38811 * 119.99930 * 356.48632 * 4 3 2 7 7 N 1.31618 * 120.00288 * 30.01666 * 6 4 3 8 8 Si 1.86798 * 119.99608 * 210.02396 * 6 4 3 9 9 H 1.48497 * 109.47634 * 84.98722 * 8 6 4 10 10 H 1.48508 * 109.47192 * 204.99210 * 8 6 4 11 11 H 1.48503 * 109.47266 * 324.98475 * 8 6 4 12 12 C 1.46498 * 120.00108 * 92.85340 * 3 2 1 13 13 C 1.50703 * 109.47230 * 270.00194 * 12 3 2 14 14 C 1.38280 * 119.96487 * 89.99588 * 13 12 3 15 15 C 1.38240 * 120.11964 * 180.02562 * 14 13 12 16 16 C 1.38253 * 120.04547 * 0.02562 * 15 14 13 17 17 Cl 1.73603 * 120.04064 * 179.97438 * 16 15 14 18 18 C 1.38819 * 119.92149 * 359.97438 * 16 15 14 19 19 O 1.35929 * 120.05915 * 179.97438 * 18 16 15 20 20 C 1.42893 * 116.99840 * 180.02562 * 19 18 16 21 21 C 1.38160 * 119.95832 * 270.30098 * 13 12 3 22 22 H 1.09002 * 109.47447 * 180.02562 * 1 2 3 23 23 H 1.09002 * 109.46793 * 300.00058 * 1 2 3 24 24 H 1.08995 * 109.47425 * 59.99685 * 1 2 3 25 25 H 1.09002 * 109.46793 * 239.99941 * 2 1 3 26 26 H 1.08995 * 109.46910 * 120.00421 * 2 1 3 27 27 H 0.97000 * 120.00071 * 180.02562 * 7 6 4 28 28 H 1.09001 * 109.47324 * 150.00158 * 12 3 2 29 29 H 1.09002 * 109.46955 * 29.99926 * 12 3 2 30 30 H 1.07997 * 119.93490 * 0.02562 * 14 13 12 31 31 H 1.07997 * 119.97567 * 179.97438 * 15 14 13 32 32 H 1.08998 * 109.47223 * 180.02562 * 20 19 18 33 33 H 1.08999 * 109.47069 * 60.00934 * 20 19 18 34 34 H 1.09002 * 109.47417 * 300.00492 * 20 19 18 35 35 H 1.07997 * 120.02128 * 359.97438 * 21 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.1910 2.0464 -1.1845 5 1 2.4963 3.0823 -1.1825 6 6 1.9732 1.3893 -2.3877 7 7 1.0902 0.4156 -2.4554 8 14 2.9337 1.8868 -3.9106 9 1 4.2400 1.1807 -3.9247 10 1 2.1605 1.5216 -5.1248 11 1 3.1641 3.3537 -3.8933 12 6 2.3221 2.0508 1.2671 13 6 1.0883 2.7534 1.7724 14 6 0.2052 2.0873 2.6022 15 6 -0.9278 2.7285 3.0671 16 6 -1.1808 4.0380 2.7027 17 17 -2.6040 4.8429 3.2861 18 6 -0.2954 4.7084 1.8698 19 8 -0.5416 5.9957 1.5094 20 6 0.4123 6.6224 0.6497 21 6 0.8377 4.0603 1.4009 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5139 0.8900 24 1 -0.3634 0.5138 -0.8899 25 1 1.8933 -0.5139 -0.8900 26 1 1.8933 -0.5139 0.8899 27 1 0.9384 -0.0438 -3.2961 28 1 3.1173 2.7798 1.1114 29 1 2.6452 1.3117 2.0003 30 1 0.4010 1.0642 2.8874 31 1 -1.6162 2.2060 3.7147 32 1 0.0966 7.6445 0.4407 33 1 0.4810 6.0649 -0.2844 34 1 1.3871 6.6361 1.1373 35 1 1.5258 4.5782 0.7492 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000450339215.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 00:56:14 Heat of formation + Delta-G solvation = 10.233735 kcal Electronic energy + Delta-G solvation = -18834.612847 eV Core-core repulsion = 15860.084433 eV Total energy + Delta-G solvation = -2974.528415 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 269.092 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -39.84896 -37.52707 -36.30480 -35.53123 -32.05554 -30.55646 -29.77510 -28.98106 -27.24001 -25.48465 -23.26629 -21.96768 -21.27448 -20.20955 -17.57741 -16.68171 -16.12637 -15.80439 -15.54951 -15.01809 -14.08043 -13.79638 -13.67115 -13.48405 -13.16269 -12.84890 -12.23031 -12.01295 -11.68906 -11.60178 -11.27431 -11.23388 -10.98245 -10.92100 -10.66650 -10.56369 -10.49217 -10.32840 -9.96953 -9.76284 -9.40926 -8.39963 -8.27492 -7.72442 -7.04453 -5.87541 -3.08917 1.59850 1.76607 2.53311 3.35042 3.43416 3.44679 3.46905 4.03933 4.47557 5.09821 5.15191 5.25102 5.35906 5.47374 5.50743 5.57035 5.66142 5.70108 5.90144 6.04604 6.25010 6.48974 6.49316 6.55041 6.64836 6.93473 7.03036 7.06683 7.15036 7.17308 7.58385 7.62834 7.76982 8.12428 8.25823 9.15479 9.77970 10.22054 11.15774 Molecular weight = 269.09amu Principal moments of inertia in cm(-1) A = 0.021452 B = 0.006215 C = 0.005424 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1304.902416 B = 4504.103431 C = 5160.642847 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.162 3.838 3 N -0.586 5.586 4 C -0.254 4.254 5 H 0.076 0.924 6 C 0.004 3.996 7 N -0.884 5.884 8 Si 0.890 3.110 9 H -0.288 1.288 10 H -0.293 1.293 11 H -0.282 1.282 12 C 0.180 3.820 13 C -0.038 4.038 14 C -0.135 4.135 15 C -0.079 4.079 16 C -0.084 4.084 17 Cl -0.080 7.080 18 C 0.132 3.868 19 O -0.313 6.313 20 C 0.027 3.973 21 C -0.181 4.181 22 H 0.017 0.983 23 H 0.019 0.981 24 H 0.087 0.913 25 H 0.089 0.911 26 H 0.006 0.994 27 H 0.253 0.747 28 H 0.058 0.942 29 H 0.053 0.947 30 H 0.125 0.875 31 H 0.129 0.871 32 H 0.096 0.904 33 H 0.060 0.940 34 H 0.054 0.946 35 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.321 6.154 9.374 11.291 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C 0.037 3.963 3 N -0.305 5.305 4 C -0.382 4.382 5 H 0.093 0.907 6 C -0.194 4.194 7 N -0.528 5.528 8 Si 0.719 3.281 9 H -0.215 1.215 10 H -0.220 1.220 11 H -0.208 1.208 12 C 0.052 3.948 13 C -0.042 4.042 14 C -0.154 4.154 15 C -0.098 4.098 16 C -0.111 4.111 17 Cl -0.052 7.052 18 C 0.086 3.914 19 O -0.226 6.226 20 C -0.068 4.068 21 C -0.201 4.201 22 H 0.036 0.964 23 H 0.038 0.962 24 H 0.106 0.894 25 H 0.107 0.893 26 H 0.024 0.976 27 H 0.064 0.936 28 H 0.076 0.924 29 H 0.072 0.928 30 H 0.143 0.857 31 H 0.147 0.853 32 H 0.114 0.886 33 H 0.079 0.921 34 H 0.073 0.927 35 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -1.619 6.215 9.277 11.283 hybrid contribution 0.206 0.319 -1.066 1.132 sum -1.413 6.535 8.211 10.588 Atomic orbital electron populations 1.22381 0.99062 0.98108 1.01533 1.21067 0.92750 0.84121 0.98315 1.44519 1.75346 1.10517 1.00144 1.19215 1.39699 0.96032 0.83238 0.90660 1.24721 0.98614 0.98665 0.97374 1.70268 1.30364 1.26884 1.25304 0.86476 0.80806 0.77946 0.82826 1.21473 1.22010 1.20793 1.19939 0.91436 0.94959 0.88440 1.21189 0.99772 0.92242 0.91036 1.20825 0.94661 0.99906 1.00054 1.20756 0.97664 0.91697 0.99712 1.19950 0.91603 0.94177 1.05406 1.98311 1.38910 1.80183 1.87769 1.18676 0.93658 0.84214 0.94876 1.86077 1.48655 1.23463 1.64402 1.23050 0.92266 0.97868 0.93603 1.21038 0.97981 0.96612 1.04421 0.96430 0.96154 0.89441 0.89326 0.97572 0.93649 0.92410 0.92828 0.85708 0.85294 0.88566 0.92122 0.92735 0.85080 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 21. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.48 9.68 37.16 0.36 -3.12 16 2 C 0.16 3.75 5.71 -4.04 -0.02 3.73 16 3 N -0.59 -13.61 2.52 -174.61 -0.44 -14.05 16 4 C -0.25 -6.49 9.68 -15.06 -0.15 -6.63 16 5 H 0.08 1.89 7.99 -52.49 -0.42 1.47 16 6 C 0.00 0.11 4.97 -17.43 -0.09 0.03 16 7 N -0.88 -23.98 8.37 55.49 0.46 -23.51 16 8 Si 0.89 20.81 29.65 -169.99 -5.04 15.77 16 9 H -0.29 -6.78 7.11 56.52 0.40 -6.37 16 10 H -0.29 -7.02 7.11 56.52 0.40 -6.62 16 11 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 12 C 0.18 3.43 5.83 -5.19 -0.03 3.40 16 13 C -0.04 -0.69 5.41 -104.63 -0.57 -1.26 16 14 C -0.14 -2.28 7.67 -39.56 -0.30 -2.58 16 15 C -0.08 -1.27 9.83 -39.57 -0.39 -1.66 16 16 C -0.08 -1.42 6.33 -39.36 -0.25 -1.67 16 17 Cl -0.08 -1.24 28.51 -51.86 -1.48 -2.72 16 18 C 0.13 2.31 6.68 -39.19 -0.26 2.05 16 19 O -0.31 -5.10 9.96 -19.52 -0.19 -5.29 16 20 C 0.03 0.34 9.81 101.05 0.99 1.34 16 21 C -0.18 -3.23 8.69 -39.44 -0.34 -3.58 16 22 H 0.02 0.36 8.14 -51.93 -0.42 -0.06 16 23 H 0.02 0.43 5.69 -51.93 -0.30 0.13 16 24 H 0.09 2.32 6.30 -51.93 -0.33 2.00 16 25 H 0.09 2.30 5.82 -51.93 -0.30 2.00 16 26 H 0.01 0.13 7.86 -51.93 -0.41 -0.28 16 27 H 0.25 6.74 8.31 -40.82 -0.34 6.40 16 28 H 0.06 1.05 7.98 -51.93 -0.41 0.64 16 29 H 0.05 0.92 7.82 -51.93 -0.41 0.52 16 30 H 0.13 1.95 7.89 -52.49 -0.41 1.53 16 31 H 0.13 1.75 8.06 -52.49 -0.42 1.32 16 32 H 0.10 0.95 8.14 -51.93 -0.42 0.52 16 33 H 0.06 0.81 7.65 -51.93 -0.40 0.41 16 34 H 0.05 0.62 7.67 -51.93 -0.40 0.22 16 35 H 0.13 2.25 6.30 -52.49 -0.33 1.92 16 LS Contribution 302.24 15.07 4.55 4.55 Total: -1.00 -27.87 302.24 -7.70 -35.57 By element: Atomic # 1 Polarization: 4.17 SS G_CDS: -4.52 Total: -0.35 kcal Atomic # 6 Polarization: -8.91 SS G_CDS: -1.05 Total: -9.96 kcal Atomic # 7 Polarization: -37.59 SS G_CDS: 0.03 Total: -37.56 kcal Atomic # 8 Polarization: -5.10 SS G_CDS: -0.19 Total: -5.29 kcal Atomic # 14 Polarization: 20.81 SS G_CDS: -5.04 Total: 15.77 kcal Atomic # 17 Polarization: -1.24 SS G_CDS: -1.48 Total: -2.72 kcal Total LS contribution 4.55 Total: 4.55 kcal Total: -27.87 -7.70 -35.57 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000450339215.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 45.799 kcal (2) G-P(sol) polarization free energy of solvation -27.870 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.929 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.695 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.566 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.234 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds