Wall clock time and date at job start Mon Mar 30 2020 01:06:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.36937 * 120.00109 * 2 1 4 4 H 1.07996 * 119.99834 * 39.52773 * 3 2 1 5 5 C 1.38812 * 119.99639 * 219.26252 * 3 2 1 6 6 N 1.31618 * 120.00124 * 16.83057 * 5 3 2 7 7 Si 1.86806 * 119.99649 * 196.83239 * 5 3 2 8 8 H 1.48500 * 109.46924 * 0.02562 * 7 5 3 9 9 H 1.48501 * 109.46734 * 119.99760 * 7 5 3 10 10 H 1.48493 * 109.47037 * 240.00080 * 7 5 3 11 11 C 1.46503 * 119.99826 * 179.97438 * 2 1 3 12 12 C 1.50706 * 109.47065 * 276.25771 * 11 2 1 13 13 C 1.38237 * 120.00181 * 98.50587 * 12 11 2 14 14 C 1.38227 * 120.00851 * 179.77167 * 13 12 11 15 15 N 1.48019 * 119.98578 * 180.25565 * 14 13 12 16 16 O 1.21792 * 119.99908 * 180.25379 * 15 14 13 17 17 O 1.21800 * 120.00046 * 0.24912 * 15 14 13 18 18 C 1.38266 * 120.02373 * 0.50556 * 14 13 12 19 19 C 1.38187 * 120.01582 * 359.75058 * 18 14 13 20 20 C 1.38331 * 120.00481 * 278.78527 * 12 11 2 21 21 Cl 1.73594 * 120.01428 * 359.97438 * 20 12 11 22 22 H 1.08995 * 109.47467 * 86.78745 * 1 2 3 23 23 H 1.09004 * 109.46719 * 206.78995 * 1 2 3 24 24 H 1.09003 * 109.47108 * 326.78443 * 1 2 3 25 25 H 0.97005 * 119.99336 * 179.97438 * 6 5 3 26 26 H 1.09001 * 109.46975 * 36.25927 * 11 2 1 27 27 H 1.08999 * 109.46689 * 156.25991 * 11 2 1 28 28 H 1.07995 * 119.99814 * 0.02562 * 13 12 11 29 29 H 1.08003 * 119.99278 * 179.72800 * 18 14 13 30 30 H 1.08004 * 120.00707 * 179.97438 * 19 18 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1497 1.1859 0.0000 4 1 1.7950 2.0142 0.5953 5 6 3.3028 1.3215 -0.7608 6 7 3.5619 0.4608 -1.7223 7 14 4.4869 2.7256 -0.4200 8 1 3.9703 3.5469 0.7042 9 1 5.8176 2.1742 -0.0590 10 1 4.6142 3.5714 -1.6339 11 6 2.1975 -1.2688 0.0006 12 6 2.3145 -1.7806 1.4132 13 6 1.4380 -2.7453 1.8737 14 6 1.5482 -3.2183 3.1679 15 7 0.6129 -4.2552 3.6587 16 8 0.7068 -4.6688 4.8004 17 8 -0.2507 -4.6949 2.9208 18 6 2.5284 -2.7193 4.0057 19 6 3.4018 -1.7512 3.5481 20 6 3.2954 -1.2810 2.2510 21 17 4.3923 -0.0649 1.6753 22 1 -0.3634 0.0576 -1.0260 23 1 -0.3633 -0.9174 0.4632 24 1 -0.3633 0.8598 0.5630 25 1 4.3676 0.5558 -2.2541 26 1 1.6615 -1.9980 -0.6069 27 1 3.1938 -1.1132 -0.4132 28 1 0.6696 -3.1324 1.2210 29 1 2.6113 -3.0861 5.0182 30 1 4.1672 -1.3613 4.2028 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000048393040.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:06:59 Heat of formation + Delta-G solvation = 37.692336 kcal Electronic energy + Delta-G solvation = -18566.129670 eV Core-core repulsion = 15391.532944 eV Total energy + Delta-G solvation = -3174.596726 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 270.056 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -41.98707 -39.34748 -36.40352 -36.06167 -35.73059 -32.11105 -31.43626 -31.02576 -26.60353 -26.13934 -25.80582 -22.62184 -22.20028 -20.84910 -18.60992 -18.45808 -17.36107 -16.95981 -16.52763 -15.63503 -14.94284 -14.41864 -14.09577 -13.61569 -13.47962 -12.96475 -12.67990 -12.26028 -11.68386 -11.57843 -11.42559 -11.39278 -11.02039 -11.01957 -10.99583 -10.88639 -10.60092 -10.36635 -10.17629 -10.02228 -9.10765 -8.71472 -8.63264 -6.81233 -6.04370 -3.57876 0.01932 1.14470 1.54170 1.59065 2.43765 3.18176 3.29430 3.31261 3.44410 4.28497 4.56440 4.66178 5.02849 5.08028 5.17086 5.40964 5.48393 5.75011 5.81580 5.93568 6.09669 6.26348 6.36007 6.56172 6.66753 6.69359 6.76006 7.29353 7.62248 7.82968 8.29144 8.92904 9.53790 10.11712 10.99124 Molecular weight = 270.06amu Principal moments of inertia in cm(-1) A = 0.029391 B = 0.006684 C = 0.005803 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 952.431586 B = 4188.220937 C = 4824.271717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.121 3.879 2 N -0.576 5.576 3 C -0.254 4.254 4 H 0.062 0.938 5 C 0.031 3.969 6 N -0.880 5.880 7 Si 0.872 3.128 8 H -0.270 1.270 9 H -0.282 1.282 10 H -0.282 1.282 11 C 0.171 3.829 12 C -0.074 4.074 13 C -0.049 4.049 14 C -0.050 4.050 15 N 0.035 4.965 16 O -0.175 6.175 17 O -0.168 6.168 18 C -0.069 4.069 19 C -0.119 4.119 20 C 0.023 3.977 21 Cl -0.016 7.016 22 H 0.014 0.986 23 H 0.027 0.973 24 H 0.034 0.966 25 H 0.259 0.741 26 H 0.044 0.956 27 H 0.122 0.878 28 H 0.151 0.849 29 H 0.151 0.849 30 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.661 -4.526 7.595 8.866 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.024 4.024 2 N -0.295 5.295 3 C -0.383 4.383 4 H 0.080 0.920 5 C -0.170 4.170 6 N -0.521 5.521 7 Si 0.700 3.300 8 H -0.195 1.195 9 H -0.209 1.209 10 H -0.209 1.209 11 C 0.044 3.956 12 C -0.080 4.080 13 C -0.070 4.070 14 C -0.134 4.134 15 N 0.552 4.448 16 O -0.388 6.388 17 O -0.383 6.383 18 C -0.089 4.089 19 C -0.139 4.139 20 C -0.006 4.006 21 Cl 0.014 6.986 22 H 0.033 0.967 23 H 0.045 0.955 24 H 0.053 0.947 25 H 0.069 0.931 26 H 0.062 0.938 27 H 0.140 0.860 28 H 0.169 0.831 29 H 0.168 0.832 30 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 1.294 -3.869 7.126 8.211 hybrid contribution 0.489 0.545 0.376 0.823 sum 1.784 -3.323 7.501 8.396 Atomic orbital electron populations 1.21139 0.85010 0.98205 0.98053 1.43655 0.99928 1.01642 1.84322 1.19049 1.07196 0.90737 1.21327 0.92047 1.25109 1.00223 0.97133 0.94537 1.69882 1.26367 1.37211 1.18651 0.86631 0.81584 0.83054 0.78715 1.19462 1.20854 1.20880 1.20240 1.02785 0.87049 0.85514 1.21476 0.91321 0.92463 1.02693 1.20948 0.98631 0.94903 0.92476 1.21157 0.97320 0.97826 0.97051 1.43667 1.00451 1.00381 1.00256 1.94487 1.77906 1.62327 1.04121 1.94521 1.28534 1.60606 1.54634 1.20716 0.92595 0.95537 1.00092 1.21031 1.00466 0.97586 0.94793 1.21377 0.93176 0.92597 0.93456 1.98455 1.60716 1.51349 1.88070 0.96731 0.95468 0.94691 0.93117 0.93765 0.86047 0.83139 0.83176 0.83512 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 21. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.12 2.42 10.71 59.85 0.64 3.06 16 2 N -0.58 -13.16 2.81 -182.49 -0.51 -13.68 16 3 C -0.25 -6.31 8.13 -15.06 -0.12 -6.43 16 4 H 0.06 1.57 7.88 -52.49 -0.41 1.16 16 5 C 0.03 0.78 3.50 -17.43 -0.06 0.72 16 6 N -0.88 -22.96 11.40 55.49 0.63 -22.32 16 7 Si 0.87 19.88 27.94 -169.99 -4.75 15.13 16 8 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 9 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 10 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 11 C 0.17 3.59 4.86 -5.19 -0.03 3.57 16 12 C -0.07 -1.34 5.45 -104.59 -0.57 -1.91 16 13 C -0.05 -0.81 9.18 -39.59 -0.36 -1.17 16 14 C -0.05 -0.79 6.85 -79.94 -0.55 -1.34 16 15 N 0.04 0.59 4.45 33.97 0.15 0.74 16 16 O -0.17 -2.88 18.45 -29.46 -0.54 -3.42 16 17 O -0.17 -2.88 18.45 -29.46 -0.54 -3.43 16 18 C -0.07 -0.95 9.55 -39.59 -0.38 -1.33 16 19 C -0.12 -1.67 9.83 -39.55 -0.39 -2.06 16 20 C 0.02 0.39 6.31 -39.50 -0.25 0.14 16 21 Cl -0.02 -0.30 22.68 -51.86 -1.18 -1.47 16 22 H 0.01 0.29 8.14 -51.93 -0.42 -0.13 16 23 H 0.03 0.48 8.05 -51.93 -0.42 0.06 16 24 H 0.03 0.68 8.07 -51.93 -0.42 0.26 16 25 H 0.26 6.55 8.31 -40.82 -0.34 6.21 16 26 H 0.04 0.89 8.00 -51.93 -0.42 0.47 16 27 H 0.12 2.85 4.72 -51.93 -0.25 2.60 16 28 H 0.15 2.33 7.60 -52.49 -0.40 1.93 16 29 H 0.15 1.71 7.61 -52.48 -0.40 1.32 16 30 H 0.15 1.64 8.06 -52.48 -0.42 1.22 16 LS Contribution 278.32 15.07 4.19 4.19 Total: -1.00 -26.38 278.32 -7.30 -33.68 By element: Atomic # 1 Polarization: 0.02 SS G_CDS: -2.69 Total: -2.67 kcal Atomic # 6 Polarization: -4.69 SS G_CDS: -2.07 Total: -6.75 kcal Atomic # 7 Polarization: -35.53 SS G_CDS: 0.27 Total: -35.26 kcal Atomic # 8 Polarization: -5.76 SS G_CDS: -1.09 Total: -6.85 kcal Atomic # 14 Polarization: 19.88 SS G_CDS: -4.75 Total: 15.13 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -1.18 Total: -1.47 kcal Total LS contribution 4.19 Total: 4.19 kcal Total: -26.38 -7.30 -33.68 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000048393040.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.369 kcal (2) G-P(sol) polarization free energy of solvation -26.376 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 44.994 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.301 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.677 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds