Wall clock time and date at job start Mon Mar 30 2020 01:30:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46495 * 109.47290 * 238.53152 * 3 2 1 5 5 C 1.36782 * 120.00505 * 263.46215 * 4 3 2 6 6 H 1.08006 * 120.00267 * 203.75109 * 5 4 3 7 7 C 1.39076 * 120.00148 * 23.75418 * 5 4 3 8 8 N 1.31349 * 119.99450 * 24.11316 * 7 5 4 9 9 Si 1.86796 * 120.00012 * 204.11185 * 7 5 4 10 10 H 1.48496 * 109.47013 * 90.00286 * 9 7 5 11 11 H 1.48505 * 109.46895 * 209.99577 * 9 7 5 12 12 H 1.48493 * 109.47357 * 329.99737 * 9 7 5 13 13 C 1.34783 * 119.99764 * 83.46371 * 4 3 2 14 14 O 1.21713 * 120.00195 * 183.68374 * 13 4 3 15 15 C 1.46816 * 119.99879 * 3.67445 * 13 4 3 16 16 C 1.35959 * 125.14252 * 173.46963 * 15 13 4 17 17 C 1.46202 * 106.07007 * 179.97438 * 16 15 13 18 18 C 1.39725 * 134.17749 * 179.97438 * 17 16 15 19 19 C 1.36622 * 119.70865 * 179.97438 * 18 17 16 20 20 C 1.38845 * 120.44284 * 0.03837 * 19 18 17 21 21 C 1.37818 * 120.74412 * 359.97438 * 20 19 18 22 22 C 1.39002 * 119.86136 * 359.97438 * 21 20 19 23 23 O 1.34735 * 133.22657 * 179.97438 * 22 21 20 24 24 H 1.09007 * 109.46947 * 118.53899 * 3 2 1 25 25 H 1.09003 * 109.47629 * 358.53823 * 3 2 1 26 26 H 0.97004 * 119.99628 * 179.97438 * 8 7 5 27 27 H 1.07999 * 126.96610 * 359.97438 * 16 15 13 28 28 H 1.07999 * 120.14675 * 0.02562 * 18 17 16 29 29 H 1.08003 * 119.78084 * 180.02562 * 19 18 17 30 30 H 1.07999 * 119.62837 * 180.26025 * 20 19 18 31 31 H 1.08000 * 120.06990 * 180.02562 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0960 0.7219 1.1780 5 6 3.4506 2.0389 1.0754 6 1 4.1447 2.4681 1.7829 7 6 2.9173 2.8256 0.0600 8 7 1.7704 2.4986 -0.4903 9 14 3.8322 4.3470 -0.5210 10 1 4.7514 3.9793 -1.6278 11 1 2.8564 5.3573 -1.0032 12 1 4.6158 4.9139 0.6057 13 6 3.1956 0.0876 2.3631 14 8 3.5369 0.7031 3.3561 15 6 2.8923 -1.3459 2.4562 16 6 3.0776 -2.1148 3.5620 17 6 2.6425 -3.4617 3.1960 18 6 2.5811 -4.6827 3.8726 19 6 2.1090 -5.7910 3.2280 20 6 1.6912 -5.7115 1.9063 21 6 1.7439 -4.5168 1.2213 22 6 2.2194 -3.3754 1.8563 23 8 2.3860 -2.0992 1.4576 24 1 2.9711 0.4918 -0.9029 25 1 2.9719 -1.0265 0.0262 26 1 1.3982 3.0475 -1.1983 27 1 3.4674 -1.7954 4.5173 28 1 2.9047 -4.7499 4.9007 29 1 2.0607 -6.7353 3.7500 30 1 1.3163 -6.5949 1.4108 31 1 1.4157 -4.4673 0.1936 RHF calculation, no. of doubly occupied orbitals= 48 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000060859809.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 30 2020 01:30:43 Heat of formation + Delta-G solvation = 41.317114 kcal Electronic energy + Delta-G solvation = -19814.791319 eV Core-core repulsion = 16642.784625 eV Total energy + Delta-G solvation = -3172.006694 eV No. of doubly occupied orbitals = 48 Molecular weight (most abundant/longest-lived isotopes) = 270.079 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -42.16359 -38.80067 -37.57060 -35.90857 -34.42644 -32.46195 -32.11756 -30.26908 -29.27321 -27.59081 -25.60660 -23.35101 -22.34609 -21.26961 -19.81897 -18.06833 -17.53799 -17.29386 -16.55798 -15.81054 -15.58651 -15.23951 -14.43275 -14.30279 -13.88134 -13.59763 -13.36823 -13.14360 -12.88715 -12.37827 -12.21551 -12.08066 -11.87416 -11.68228 -11.40326 -11.25142 -10.87598 -10.64881 -10.54083 -10.36377 -9.92186 -9.44275 -9.08378 -8.49772 -8.25480 -7.95358 -6.72871 -4.19245 0.88540 1.48095 2.23585 2.89895 3.05116 3.13216 3.17663 3.55831 3.80307 3.91031 4.02649 4.04192 4.45426 4.73520 4.78423 4.98081 5.02424 5.21350 5.26635 5.35635 5.47864 5.57000 5.86366 5.99296 6.03203 6.24366 6.35263 6.44152 6.50216 6.63793 6.73077 7.26107 7.29747 7.73057 8.06499 8.73487 8.76113 8.92906 9.48494 10.31599 Molecular weight = 270.08amu Principal moments of inertia in cm(-1) A = 0.033127 B = 0.005534 C = 0.004966 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 845.020047 B = 5058.355753 C = 5636.939123 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.463 5.463 2 C 0.247 3.753 3 C 0.213 3.787 4 N -0.411 5.411 5 C -0.317 4.317 6 H 0.115 0.885 7 C 0.038 3.962 8 N -0.850 5.850 9 Si 0.932 3.068 10 H -0.272 1.272 11 H -0.282 1.282 12 H -0.265 1.265 13 C 0.507 3.493 14 O -0.552 6.552 15 C 0.020 3.980 16 C -0.161 4.161 17 C -0.129 4.129 18 C -0.071 4.071 19 C -0.142 4.142 20 C -0.101 4.101 21 C -0.106 4.106 22 C 0.051 3.949 23 O -0.181 6.181 24 H 0.121 0.879 25 H 0.103 0.897 26 H 0.279 0.721 27 H 0.164 0.836 28 H 0.126 0.874 29 H 0.125 0.875 30 H 0.131 0.869 31 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.393 -12.974 0.338 13.414 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.143 5.143 2 C -0.071 4.071 3 C 0.087 3.913 4 N -0.128 5.128 5 C -0.444 4.444 6 H 0.132 0.868 7 C -0.170 4.170 8 N -0.485 5.485 9 Si 0.758 3.242 10 H -0.197 1.197 11 H -0.208 1.208 12 H -0.189 1.189 13 C 0.296 3.704 14 O -0.436 6.436 15 C -0.030 4.030 16 C -0.182 4.182 17 C -0.130 4.130 18 C -0.089 4.089 19 C -0.160 4.160 20 C -0.119 4.119 21 C -0.124 4.124 22 C 0.003 3.997 23 O -0.083 6.083 24 H 0.139 0.861 25 H 0.120 0.880 26 H 0.090 0.910 27 H 0.181 0.819 28 H 0.143 0.857 29 H 0.143 0.857 30 H 0.149 0.851 31 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.687 -12.431 0.375 12.551 hybrid contribution 0.575 0.770 -0.304 1.008 sum 2.263 -11.661 0.071 11.879 Atomic orbital electron populations 1.80861 1.13398 1.11867 1.08195 1.28908 0.95046 0.90216 0.92937 1.18913 0.82387 0.97441 0.92585 1.43574 1.53277 1.10762 1.05206 1.19813 1.24928 0.84355 1.15286 0.86768 1.25512 0.94431 0.99701 0.97348 1.69890 1.13725 1.40276 1.24617 0.85818 0.79163 0.79866 0.79384 1.19733 1.20805 1.18879 1.16605 0.87026 0.82598 0.84200 1.90739 1.53631 1.64327 1.34938 1.22829 1.00207 0.92860 0.87094 1.22507 1.05841 0.90031 0.99815 1.19975 1.03945 0.94666 0.94406 1.20310 0.98539 0.90494 0.99580 1.20698 1.01756 0.98413 0.95147 1.20875 0.99889 0.96509 0.94636 1.19968 1.02782 0.88996 1.00660 1.19902 1.01123 0.84875 0.93831 1.84367 1.68389 1.17480 1.38092 0.86096 0.87956 0.91016 0.81873 0.85653 0.85696 0.85149 0.85145 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.46 -11.47 18.54 42.15 0.78 -10.69 16 2 C 0.25 5.72 12.39 -20.76 -0.26 5.46 16 3 C 0.21 4.43 4.76 -6.83 -0.03 4.40 16 4 N -0.41 -9.81 2.58 -119.38 -0.31 -10.12 16 5 C -0.32 -7.97 9.14 -15.03 -0.14 -8.10 16 6 H 0.11 2.96 7.54 -52.48 -0.40 2.57 16 7 C 0.04 0.91 4.73 -17.45 -0.08 0.83 16 8 N -0.85 -21.19 9.93 55.50 0.55 -20.64 16 9 Si 0.93 18.66 29.62 -169.99 -5.03 13.63 16 10 H -0.27 -5.24 7.11 56.52 0.40 -4.84 16 11 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 12 H -0.26 -5.33 7.11 56.52 0.40 -4.93 16 13 C 0.51 12.14 7.52 -12.79 -0.10 12.04 16 14 O -0.55 -14.69 16.56 5.18 0.09 -14.60 16 15 C 0.02 0.42 6.70 -36.93 -0.25 0.17 16 16 C -0.16 -2.93 10.82 -37.20 -0.40 -3.33 16 17 C -0.13 -2.10 6.38 -105.19 -0.67 -2.77 16 18 C -0.07 -0.92 10.06 -39.61 -0.40 -1.32 16 19 C -0.14 -1.57 9.98 -39.94 -0.40 -1.96 16 20 C -0.10 -1.12 10.01 -39.51 -0.40 -1.52 16 21 C -0.11 -1.43 10.07 -39.45 -0.40 -1.83 16 22 C 0.05 0.85 7.41 -38.35 -0.28 0.57 16 23 O -0.18 -3.44 6.38 2.72 0.02 -3.43 16 24 H 0.12 2.41 6.92 -51.92 -0.36 2.05 16 25 H 0.10 1.84 5.39 -51.93 -0.28 1.56 16 26 H 0.28 6.66 8.31 -40.82 -0.34 6.32 16 27 H 0.16 2.75 8.06 -52.49 -0.42 2.32 16 28 H 0.13 1.32 8.06 -52.49 -0.42 0.90 16 29 H 0.13 1.00 8.06 -52.48 -0.42 0.58 16 30 H 0.13 1.04 8.06 -52.49 -0.42 0.61 16 31 H 0.13 1.52 8.06 -52.49 -0.42 1.10 16 LS Contribution 283.33 15.07 4.27 4.27 Total: -1.00 -30.32 283.33 -5.72 -36.04 By element: Atomic # 1 Polarization: 5.19 SS G_CDS: -2.28 Total: 2.90 kcal Atomic # 6 Polarization: 6.44 SS G_CDS: -3.80 Total: 2.64 kcal Atomic # 7 Polarization: -42.48 SS G_CDS: 1.02 Total: -41.45 kcal Atomic # 8 Polarization: -18.13 SS G_CDS: 0.10 Total: -18.03 kcal Atomic # 14 Polarization: 18.66 SS G_CDS: -5.03 Total: 13.63 kcal Total LS contribution 4.27 Total: 4.27 kcal Total: -30.32 -5.72 -36.04 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000060859809.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 77.357 kcal (2) G-P(sol) polarization free energy of solvation -30.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 47.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.721 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.040 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.317 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds